TCONS_00042084 (transcript) - C. hemisphaerica

Overview
NameTCONS_00042084
Unique NameTCONS_00042084
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1583

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00042084 ID=TCONS_00042084|Name=TCONS_00042084|organism=Clytia hemisphaerica|type=transcript|length=1583bp
ttagttttgatgtcTCAATCAACGTATCTGGCGGATGCACTTTGATTTTT
GATAACAGTTACAAGTTGATTAATATTCAATTACGCAAATCTAACAGACA
ATGGAATGATTTTTCGCCAAATGTTGGACCGCATCATCACAATTTCATTA
CAGTTGATAAATTGAAGCTTGGAAGTTTTTATGCGTTTCGTGGCATTTTT
TTGAACCAGGCAGGAGAAGTGGTCATCTTCGAAACAAAAGAAGACTTACA
AATCAAAGAAATCAAAGAAGAAGATAAGTTGGTGGTATCCGGTCAAAACT
ATGTgattcaagattttgaaaacttaagGGCTGATGTGATATATGTCGAT
TACGAATCAATCCATTTCATTTTTGACAAGGAAAGTGACATCAGCGAGGT
TATTAAAGTCGAAATACGAAGTGGTGACGAGAAATGGGATCTTGTTGACG
AAAATTGTTACGAGTTTCGAGACCAGTCACTTGATGGTGCTAAGAATCTA
ACGGTTGGTGAATTGGAAGAAAATGAATGTTATGATATGCGTATAACCGT
CAGAAAATCCGATGATGGAGTGGTTGTTTACATTAGAGAAGCTATTATAA
CAGACGAGTCACACTCATTGTCCATGTATAATTTGGTATCTGTAAAAACA
CATCCTCTTGGTTATTCTGAAGACTCGtatcaagaaaatgttttggcAAA
TAAGAAGAAAGTTATTCGATTCCAAACTGGTGCTGGTCAGGAAAAACGAT
CATTGCAAAGCATTGACAGTGCTAAATATGTTAACACCAATTTTCCTGAT
GAAGATATTGTCCTTCCTTATTTGAACACAATGGAACCACAGTCCTTTAG
AAGTGTTTTAGCGAAGAAATTCATGGCTATCGGGGAGAAACTCCCTGGAA
AGTTCTATCTGTTGTCTTCTTTCAATGCCAGAAAACATTTGGAGAAGACA
CTTGGtgtaaagaaaaaatgtatcGAAGAGCAGTTTCGATATCTGTCTCT
GGATGGcaatttaatgatattttatcCACCCTCATACCCTGCAGTAGTCC
TAATGACATTACCAGGATCTGAAAGAGAAAGCCTCCATCAGCTGATCTTC
AGAGCAGATGAGAACCTAAAATCGTATCTCGCGTTGCACGAAGATCTTCT
CCAAGTCAAAAGATTTGCCATTATCAATGTCATTGCGGCTGTTCATCACA
AAAGAGAAGACGTCGAGAAGTCCCTACATTGTCAAGATAGCTTACCATTC
ATGTTATTTTCGGACTTTGTCTACGATTCTCAAACTTGGTGGAATAAAAT
TGAGGAATTCTTGGGGCAAATAGCTAATGACCTTGAGGAAGCTGACCAAC
AACGCACATTCGAAATTTCTGCACGATCGATCCTTCTCGAAGCATTGATC
GATGAAAACTTTCCAACTCTTTTTGCCAAAGATGAAGAAGTGTTCTGTAA
GAAGATCATGAACAGAGCACAGATTGACGTCTTGTTAGACAAACAACATA
GTATCGAACGTTAAATCAATGATTATCATGTTTTTCGTTTTAATCGTTCA
ATCAATGGTTTTAGTTGATTTAATGATCAAAAC
Run BLAST on NCBI

protein sequence of TCONS_00042084-protein

>TCONS_00042084-protein ID=TCONS_00042084-protein|Name=TCONS_00042084-protein|organism=Clytia hemisphaerica|type=polypeptide|length=503bp
SFDVSINVSGGCTLIFDNSYKLINIQLRKSNRQWNDFSPNVGPHHHNFIT
VDKLKLGSFYAFRGIFLNQAGEVVIFETKEDLQIKEIKEEDKLVVSGQNY
VIQDFENLRADVIYVDYESIHFIFDKESDISEVIKVEIRSGDEKWDLVDE
NCYEFRDQSLDGAKNLTVGELEENECYDMRITVRKSDDGVVVYIREAIIT
DESHSLSMYNLVSVKTHPLGYSEDSYQENVLANKKKVIRFQTGAGQEKRS
LQSIDSAKYVNTNFPDEDIVLPYLNTMEPQSFRSVLAKKFMAIGEKLPGK
FYLLSSFNARKHLEKTLGVKKKCIEEQFRYLSLDGNLMIFYPPSYPAVVL
MTLPGSERESLHQLIFRADENLKSYLALHEDLLQVKRFAIINVIAAVHHK
REDVEKSLHCQDSLPFMLFSDFVYDSQTWWNKIEEFLGQIANDLEEADQQ
RTFEISARSILLEALIDENFPTLFAKDEEVFCKKIMNRAQIDVLLDKQHS
IER
Run BLAST on NCBI

transcript from alignment at sc0003197:1..5453-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00042084 ID=TCONS_00042084|Name=TCONS_00042084|organism=Clytia hemisphaerica|type=transcript|length=5453bp|location=Sequence derived from alignment at sc0003197:1..5453- (Clytia hemisphaerica)
TTAGTTTTGATGTCTCAATCAACGTATCTGGCGGATGCACTTTGATTTTT GATAACAGTTACAAGTTGATTAATATTCAATTACGCAAATCTAACAGACA ATGGAATGATTTTTCGCCAAATGTTGGACCGCATCATCACAATTTCATTA CAGTTGATAAATTGAAGCTTGGAAGTTTTTATGCGTTTCGTGGCATTTTT TTGAACCAGGCAGGAGAAGTGGTCATCTTCGAAACAAAAGAAGACTTACA AATCAAAGGTATTCTGATTTTCAATGTTGAAAGTTGATTCGTTTTATAGA TTCGTAACCGTCTCTGGAGTGAAATAATTAAATTACCAGTAAATGATTCA AATTGTTTGTAAACTAAAGTCGATCAACTTTACACGCTAACTTTTTTAAT ATATGTAATGTTCATGATGAAATTAGCCTAAACTGTCCTATCAATATGCT GATCTGGAATTTCCATTTCGAGCTCTCCTCCAGTTCTCCTCCAGTTCTTG ATACAGATCTCTGAGAAGCATCTTTTTTTATTACAGAAATCAAAGAAGAA GATAAGTTGGTGGTATCCGGTCAAAACTATGTGATTCAAGATTTTGAAAA CTTAAGGTACATGGAATCACATGATATTTTATCCCAGTTTAAGACGATAT CTTGTTTTTCATCGATTTACAAATATGACGTTAATTTTAAAGGACTTGTG CTAATCTAAGCTAATAGCATGGAAATCAGAATCATTTTACCGACAATGAT ACACGTGTTTTTTATAAGCATATTAAATAACCCGAAAAACTTGCTCGAAG ATGCTGAGATCCGAAAGGCTGAAAAATGTATCCCAAGCATAATTTTAGGG AAATTTAGCAAATCCGTTAAAAAACAGCCAAAAACAGCCAAAATTGGAAT TACTTTTTTCGTAGGCTCAAGGCAATGCTTATAGCATATGATTGAATTTT TGCCATATCTGAGCCTACATATGCTTTTTAAAGTGCAATGTTAAAAAAAT GATGAGATTTAGAGCTTTAGTAAGAAAGAAAGTGTATTATTCTAAATAAT TACATTCAATATATTTCTTCATTGCTCAGGGCTGATGTGATATATGTCGA TGACAAATCAATCTNATATATTTCTTCATTGCTCAGGGCTGATGTGATAT ATGTCGATTACGAATCAATCCATTTCATTTTTGACAAGGAAAGTGACATC AGCGAGGTTATTAAAGTCGAAATACGAAGTGGTGACGAGAAATGGGATCT TGTTGACGAAAATTGTTACGAGTTTCGAGACCAGTCACTTGATGGTGCTA AGAATCTAACGGTTGGTGAATTGGAAGAAAATGAATGTTATGATATGCGT ATAACCGTCAGAAAATCCGATGATGGAGTGGTTGTTTACATTAGAGAAGC TATTATAACAGGTGAGTTGTTACCTCAATTTTACGTTATTCCATCATAGC TTGTGCCCTATTGCTTAACCCTTCGTGCATCTTGGTGAAGGGGGAGGCGG AGTATCTTAGCAACCTATAAAATGTTTATCCGATTGACCTGAAATTTGTG AGGCATCTCCAGGTAACATGTATTTTTGGGGCAGAGGATCTATTTTTGCC ACTTGCTGGTATCGTGTATTTTACAGACTGACCAAAAATTGCATTTTTGC TTAAATCTGCCCTAGGTTACTGAATTTGAAAATGTCATTTTTGACACTTA TGATCCTTCTTACAGCCAAAATTTCAGCAAAATCAGACCGCGGTTATGCT GAAAGTGAGCAATTTTAAGTAAAAACGTACCGGTCTGTTAAATATCATGA TGAGGTCGTTTGAGTATAGTGTACGTAGGATCTCTGGAGTTAAGCTGGCG AAACCTCGCTTGATGACCCCGATCATAGAGTTAGCTTTGTTGACTTGCTT GGCTATGTCTTCTTCAAATGATAGTTCAGCATCAATCAGTATACCAAGGT CTTTTTCTTCGAATACATGCGCAAGACGATACGGGTAAGCATGTTTGATG TTTGCGAATTTACCAAGCATAAGGACGTGGCATTTGTCGGGGTGGAATTT CAAGAGCCAATCTTCAGACCATTTTTCGAGTTTCTCTATATCACTTTGGA TGATGAGAGAATCAGTGATAGAATTGACCTCCTTGAAAATCTTCGTGTCA TCTGCGAAAAATAGTAGAGATGAAATAACTTTGTCAGGCAGATCATTTAT ATACAAGACAAAAAGTAATGGTCCTGAAATACTCCCTTGTGGTATTCCAC TCACGACTGTGTCAACTTTCGATTTTGATTGGCTCATCTTGACTAACTGC TTTCTTCCACTTAGAAACGAGATGTAATCCTATTCTTTATTGAACCGACT ATACTGTAACCTTCTAACCTTTTGCAGAGTCTGTGATGAGGCATATTATC AAATGCCTTGTCAAAGTTGAAATAGATGCAGTCTACAACTTTTTCATCAG ATATAATTTCACAGCACTTATAGATATGATTTAAAAGCTGGGTAACAGTG GAGCGTCTACTGATGAAGCCTTGCTGCTTATCCAAAAAGAGGTGCAGGTT TGTCAGGTGGTTTGTCATATGCTCACGTAAGATAGACTCCATCAGCTTGC AAACCACGGATNTGCTTATCCGAAAAGAGGTGCAGGTTTGTCAGGTGGTT TGTCATATGCTCACGTAAGATAGACTCCATCAGCTTGCAAACCACGGATG TTAAGCTCACTGGTCTGTAGTTAACTGCCAAGTTATGCCCTTCTTTGTTT TTATAAATGGGTGTGACGTGAGCAAGCTTCCAAGCTTGAATCCCTTCAGC CAGAGTCTTCATCAATAATCTTTGAAAGGGGCTCAGAAATTTCATCGACA AGTTCCTTTAGCATCCTTAGATGTATTTCGTCAGGACCAAATGATTTGTT TGAATCCAGTTTCATGAACCTCCTACTTACCATATCATTAGTTATAAAGA TGTCAGCAATATCATGCTCTGTTCTGCGTGGGAATTCGGGAAGATCTCCG TCGGGCTCCATGTCGAAAACACTGCACAATTGTTGTTGCAGAGTGTTTGC TTTCTCGTGATCTTCGTGTCGAAGTGAAGACTTGTCCTTTTGCTCAAGAA GTGAAGAAACTCCTGTCGAAGCTTTCATCTTACTTCTTACATGTGACCAA AAAACCTTAGGTTTGGTTTTTGCTCTATTGCAGATGTTACGCTCGTAGTT CCTATGGGCTTGTGTCATGATCCGGTTGACTCTATTTCGTGCTGTTACAT GGGCTTTCCACGGGGCACGAGTCCATTCCTTGTGCAATCGACACTTTTCA CTCGCTTCTCTTCGCAGATCTTCTCCTATTGGTATCGATCCCTTGGATCG CCAACTTTGACAATCGAGTTCCTTAAGTAGGACGAATTTATTTCTAAGCT CTAATATTTTTGATCGAATTCCAAATTACCTCTAACGATTTATTTTCCAT CTCATTGAGTAACTCTTTTGACCAATCGTTGACTACCAGAGACTGCTTCA TTGCACAATAATCACTTTCATCGAAGAAATTACTCTTAGAATTTATGTTG CGCTTAGTATAACAAGCAAATGTGAAGGCCAAGACACTGTGATTACTCAA CCCCAGTGGACTTAGATATTGTAGATCACGAATTTGATTCTCTTCACTTG TAAAGATCAAGTCAACCGTAGAGGGATCATCTTATTCGTCCGAATGTTGG TGTCAAGTCACAAAGTTTTCACTCAAAGAAGAAATTTTTTTCTGTTGTTG ACTTTTTTATAAAAACACACACACATGATAGCTATTATTAGCTATTACAT AATAGAACATGTCCATCGGATTGATAAAGTTTCAAAAATAAAGAAACAAT TCAAAATGTCTGTAGACCAATTTTTTGATATGTTTATTACCCAATTTGAG AGTGCTGATTCCGAATTTGAATGTTACCAAGCTTGAATAACACGCAGTTT TTGCGTATTTTGCGATTTTTTGCGTTTTTAGGCAAAATTGTAAGCCCTGA AACTTCATGATTTTTGAGGGTTCTTCAGAATCAAAAAACACCTATACCAC GTGATAGAACTCTTCAAACTGGGCAAAATTGTGATACATCAAATTCTCAA CTTTTCTAGATCAATGATTTTGTGGTCAAAAATTGATTCAAAACAGGGAA TTTCCCCACAATCTACATAATTTATGAAAAATTATAGCATTTTTTACCAA CAACAAAATTTGCTTTTTTCCAGTTTGTTGGAAATATGCAAAAATCTAAA GAATATTGATAGATTCATAAGAAGTTTAACCAAAGATTCATCACAGATTT TAATCATCTGTATAGAGATGTCATCCTAACCATGTGCTTTGTTAGTCGTA AATGTGCGAATGAGGGCTAAGATTTTGGCTTGGTGGAGAGGTATATTGTC TATTGCTTTTGAAAATATTGAAAAGTGATACGACAACTTTAAAAGCTTTA GTTGTTTTTTCTTCTCATTTCAGACGAGTCACACTCATTGTCCATGTATA ATTTGGTATCTGTAAAAACACATCCTCTTGGTTATTCTGAAGACTCGTAT CAAGAAAATGTTTTGGCAAATAAGAAGAAAGTTATTCGATTCCAAACTGG TGCTGGTCAGGAAAAACGATCATTGCAAAGCATTGACAGTGCTAAATATG TTAACACCAATTTTCCTGATGAAGATATTGTCCTTCCTTATTTGAACACA ATGGAACCACAGTCCTTTAGAAGTGTTTTAGCGAAGAAATTCATGGCTAT CGGGGAGAAACTCCCTGGAAAGTTCTATCTGTTGTCTTCTTTCAATGCCA GAAAACATTTGGAGAAGACACTTGGTGTAAAGAAAAAATGTATCGAAGAG CAGTTTCGATATCTGTCTCTGGATGGCAATTTAATGATATTTTATCCACC CTCATACCCTGCAGTAGTCCTAATGACATTACCAGGATCTGAAAGAGAAA GCCTCCATCAGCTGATCTTCAGAGCAGATGAGAACCTAAAATCGTATCTC GCGTTGCACGAAGATCTTCTCCAAGTCAAAAGATTTGCCATTATCAATGT CATTGCGGCTGTTCATCACAAAAGAGAAGACGTCGAGAAGTCCCTACATT GTCAAGATAGCTTACCATTCATGTTATTTTCGGACTTTGTCTACGATTCT CAAACTTGGTGGAATAAAATTGAGGAATTCTTGGGGCAAATAGCTAATGA CCTTGAGGAAGCTGACCAACAACGCACATTCGAAATTTCTGCACGATCGA TCCTTCTCGAAGCATTGATCGATGAAAACTTTCCAACTCTTTTTGCCAAA GATGAAGAAGTGTTCTGTAAGAAGATCATGAACAGAGCACAGATTGACGT CTTGTTAGACAAACAACATAGTATCGAACGTTAAATCAATGATTATCATG TTTTTCGTTTTAATCGTTCAATCAATGGTTTTAGTTGATTTAATGATCAA AAC

Coding sequence (CDS) from alignment at sc0003197:1..5453-

>TCONS_00042084 ID=TCONS_00042084|Name=TCONS_00042084|organism=Clytia hemisphaerica|type=CDS|length=6048bp|location=Sequence derived from alignment at sc0003197:1..5453- (Clytia hemisphaerica)
ACGAGTCACACTCATTGTCCATGTATAATTTGGTATCTGTAAAAACACAT
CCTCTTGGTTATTCTGAAGACTCGTATCAAGAAAATGTTTTGGCAAATAA
GAAGAAAGTTATTCGATTCCAAACTGGTGCTGGTCAGGAAAAACGATCAT
TGCAAAGCATTGACAGTGCTAAATATGTTAACACCAATTTTCCTGATGAA
GATATTGTCCTTCCTTATTTGAACACAATGGAACCACAGTCCTTTAGAAG
TGTTTTAGCGAAGAAATTCATGGCTATCGGGGAGAAACTCCCTGGAAAGT
TCTATCTGTTGTCTTCTTTCAATGCCAGAAAACATTTGGAGAAGACACTT
GGTGTAAAGAAAAAATGTATCGAAGAGCAGTTTCGATATCTGTCTCTGGA
TGGCAATTTAATGATATTTTATCCACCCTCATACCCTGCAGTAGTCCTAA
TGACATTACCAGGATCTGAAAGAGAAAGCCTCCATCAGCTGATCTTCAGA
GCAGATGAGAACCTAAAATCGTATCTCGCGTTGCACGAAGATCTTCTCCA
AGTCAAAAGATTTGCCATTATCAATGTCATTGCGGCTGTTCATCACAAAA
GAGAAGACGTCGAGAAGTCCCTACATTGTCAAGATAGCTTACCATTCATG
TTATTTTCGGACTTTGTCTACGATTCTCAAACTTGGTGGAATAAAATTGA
GGAATTCTTGGGGCAAATAGCTAATGACCTTGAGGAAGCTGACCAACAAC
GCACATTCGAAATTTCTGCACGATCGATCCTTCTCGAAGCATTGATCGAT
GAAAACTTTCCAACTCTTTTTGCCAAAGATGAAGAAGTGTTCTGTAAGAA
GATCATGAACAGAGCACAGATTGACGTCTTGTTAGACAAACAACATAGTA
TCGAACGTTAAGGCTGATGTGATATATGTCGATTACGAATCAATCCATTT
CATTTTTGACAAGGAAAGTGACATCAGCGAGGTTATTAAAGTCGAAATAC
GAAGTGGTGACGAGAAATGGGATCTTGTTGACGAAAATTGTTACGAGTTT
CGAGACCAGTCACTTGATGGTGCTAAGAATCTAACGGTTGGTGAATTGGA
AGAAAATGAATGTTATGATATGCGTATAACCGTCAGAAAATCCGATGATG
GAGTGGTTGTTTACATTAGAGAAGCTATTATAACAGAAATCAAAGAAGAA
GATAAGTTGGTGGTATCCGGTCAAAACTATGTGATTCAAGATTTTGAAAA
CTTAAGAGTTTTGATGTCTCAATCAACGTATCTGGCGGATGCACTTTGAT
TTTTGATAACAGTTACAAGTTGATTAATATTCAATTACGCAAATCTAACA
GACAATGGAATGATTTTTCGCCAAATGTTGGACCGCATCATCACAATTTC
ATTACAGTTGATAAATTGAAGCTTGGAAGTTTTTATGCGTTTCGTGGCAT
TTTTTTGAACCAGGCAGGAGAAGTGGTCATCTTCGAAACAAAAGAAGACT
TACAAATCAAAGACGAGTCACACTCATTGTCCATGTATAATTTGGTATCT
GTAAAAACACATCCTCTTGGTTATTCTGAAGACTCGTATCAAGAAAATGT
TTTGGCAAATAAGAAGAAAGTTATTCGATTCCAAACTGGTGCTGGTCAGG
AAAAACGATCATTGCAAAGCATTGACAGTGCTAAATATGTTAACACCAAT
TTTCCTGATGAAGATATTGTCCTTCCTTATTTGAACACAATGGAACCACA
GTCCTTTAGAAGTGTTTTAGCGAAGAAATTCATGGCTATCGGGGAGAAAC
TCCCTGGAAAGTTCTATCTGTTGTCTTCTTTCAATGCCAGAAAACATTTG
GAGAAGACACTTGGTGTAAAGAAAAAATGTATCGAAGAGCAGTTTCGATA
TCTGTCTCTGGATGGCAATTTAATGATATTTTATCCACCCTCATACCCTG
CAGTAGTCCTAATGACATTACCAGGATCTGAAAGAGAAAGCCTCCATCAG
CTGATCTTCAGAGCAGATGAGAACCTAAAATCGTATCTCGCGTTGCACGA
AGATCTTCTCCAAGTCAAAAGATTTGCCATTATCAATGTCATTGCGGCTG
TTCATCACAAAAGAGAAGACGTCGAGAAGTCCCTACATTGTCAAGATAGC
TTACCATTCATGTTATTTTCGGACTTTGTCTACGATTCTCAAACTTGGTG
GAATAAAATTGAGGAATTCTTGGGGCAAATAGCTAATGACCTTGAGGAAG
CTGACCAACAACGCACATTCGAAATTTCTGCACGATCGATCCTTCTCGAA
GCATTGATCGATGAAAACTTTCCAACTCTTTTTGCCAAAGATGAAGAAGT
GTTCTGTAAGAAGATCATGAACAGAGCACAGATTGACGTCTTGTTAGACA
AACAACATAGTATCGAACGTTAAGGCTGATGTGATATATGTCGATTACGA
ATCAATCCATTTCATTTTTGACAAGGAAAGTGACATCAGCGAGGTTATTA
AAGTCGAAATACGAAGTGGTGACGAGAAATGGGATCTTGTTGACGAAAAT
TGTTACGAGTTTCGAGACCAGTCACTTGATGGTGCTAAGAATCTAACGGT
TGGTGAATTGGAAGAAAATGAATGTTATGATATGCGTATAACCGTCAGAA
AATCCGATGATGGAGTGGTTGTTTACATTAGAGAAGCTATTATAACAGAA
ATCAAAGAAGAAGATAAGTTGGTGGTATCCGGTCAAAACTATGTGATTCA
AGATTTTGAAAACTTAAGAGTTTTGATGTCTCAATCAACGTATCTGGCGG
ATGCACTTTGATTTTTGATAACAGTTACAAGTTGATTAATATTCAATTAC
GCAAATCTAACAGACAATGGAATGATTTTTCGCCAAATGTTGGACCGCAT
CATCACAATTTCATTACAGTTGATAAATTGAAGCTTGGAAGTTTTTATGC
GTTTCGTGGCATTTTTTTGAACCAGGCAGGAGAAGTGGTCATCTTCGAAA
CAAAAGAAGACTTACAAATCAAAGACGAGTCACACTCATTGTCCATGTAT
AATTTGGTATCTGTAAAAACACATCCTCTTGGTTATTCTGAAGACTCGTA
TCAAGAAAATGTTTTGGCAAATAAGAAGAAAGTTATTCGATTCCAAACTG
GTGCTGGTCAGGAAAAACGATCATTGCAAAGCATTGACAGTGCTAAATAT
GTTAACACCAATTTTCCTGATGAAGATATTGTCCTTCCTTATTTGAACAC
AATGGAACCACAGTCCTTTAGAAGTGTTTTAGCGAAGAAATTCATGGCTA
TCGGGGAGAAACTCCCTGGAAAGTTCTATCTGTTGTCTTCTTTCAATGCC
AGAAAACATTTGGAGAAGACACTTGGTGTAAAGAAAAAATGTATCGAAGA
GCAGTTTCGATATCTGTCTCTGGATGGCAATTTAATGATATTTTATCCAC
CCTCATACCCTGCAGTAGTCCTAATGACATTACCAGGATCTGAAAGAGAA
AGCCTCCATCAGCTGATCTTCAGAGCAGATGAGAACCTAAAATCGTATCT
CGCGTTGCACGAAGATCTTCTCCAAGTCAAAAGATTTGCCATTATCAATG
TCATTGCGGCTGTTCATCACAAAAGAGAAGACGTCGAGAAGTCCCTACAT
TGTCAAGATAGCTTACCATTCATGTTATTTTCGGACTTTGTCTACGATTC
TCAAACTTGGTGGAATAAAATTGAGGAATTCTTGGGGCAAATAGCTAATG
ACCTTGAGGAAGCTGACCAACAACGCACATTCGAAATTTCTGCACGATCG
ATCCTTCTCGAAGCATTGATCGATGAAAACTTTCCAACTCTTTTTGCCAA
AGATGAAGAAGTGTTCTGTAAGAAGATCATGAACAGAGCACAGATTGACG
TCTTGTTAGACAAACAACATAGTATCGAACGTTAAGGCTGATGTGATATA
TGTCGATTACGAATCAATCCATTTCATTTTTGACAAGGAAAGTGACATCA
GCGAGGTTATTAAAGTCGAAATACGAAGTGGTGACGAGAAATGGGATCTT
GTTGACGAAAATTGTTACGAGTTTCGAGACCAGTCACTTGATGGTGCTAA
GAATCTAACGGTTGGTGAATTGGAAGAAAATGAATGTTATGATATGCGTA
TAACCGTCAGAAAATCCGATGATGGAGTGGTTGTTTACATTAGAGAAGCT
ATTATAACAGAAATCAAAGAAGAAGATAAGTTGGTGGTATCCGGTCAAAA
CTATGTGATTCAAGATTTTGAAAACTTAAGAGTTTTGATGTCTCAATCAA
CGTATCTGGCGGATGCACTTTGATTTTTGATAACAGTTACAAGTTGATTA
ATATTCAATTACGCAAATCTAACAGACAATGGAATGATTTTTCGCCAAAT
GTTGGACCGCATCATCACAATTTCATTACAGTTGATAAATTGAAGCTTGG
AAGTTTTTATGCGTTTCGTGGCATTTTTTTGAACCAGGCAGGAGAAGTGG
TCATCTTCGAAACAAAAGAAGACTTACAAATCAAAGACGAGTCACACTCA
TTGTCCATGTATAATTTGGTATCTGTAAAAACACATCCTCTTGGTTATTC
TGAAGACTCGTATCAAGAAAATGTTTTGGCAAATAAGAAGAAAGTTATTC
GATTCCAAACTGGTGCTGGTCAGGAAAAACGATCATTGCAAAGCATTGAC
AGTGCTAAATATGTTAACACCAATTTTCCTGATGAAGATATTGTCCTTCC
TTATTTGAACACAATGGAACCACAGTCCTTTAGAAGTGTTTTAGCGAAGA
AATTCATGGCTATCGGGGAGAAACTCCCTGGAAAGTTCTATCTGTTGTCT
TCTTTCAATGCCAGAAAACATTTGGAGAAGACACTTGGTGTAAAGAAAAA
ATGTATCGAAGAGCAGTTTCGATATCTGTCTCTGGATGGCAATTTAATGA
TATTTTATCCACCCTCATACCCTGCAGTAGTCCTAATGACATTACCAGGA
TCTGAAAGAGAAAGCCTCCATCAGCTGATCTTCAGAGCAGATGAGAACCT
AAAATCGTATCTCGCGTTGCACGAAGATCTTCTCCAAGTCAAAAGATTTG
CCATTATCAATGTCATTGCGGCTGTTCATCACAAAAGAGAAGACGTCGAG
AAGTCCCTACATTGTCAAGATAGCTTACCATTCATGTTATTTTCGGACTT
TGTCTACGATTCTCAAACTTGGTGGAATAAAATTGAGGAATTCTTGGGGC
AAATAGCTAATGACCTTGAGGAAGCTGACCAACAACGCACATTCGAAATT
TCTGCACGATCGATCCTTCTCGAAGCATTGATCGATGAAAACTTTCCAAC
TCTTTTTGCCAAAGATGAAGAAGTGTTCTGTAAGAAGATCATGAACAGAG
CACAGATTGACGTCTTGTTAGACAAACAACATAGTATCGAACGTTAAGGC
TGATGTGATATATGTCGATTACGAATCAATCCATTTCATTTTTGACAAGG
AAAGTGACATCAGCGAGGTTATTAAAGTCGAAATACGAAGTGGTGACGAG
AAATGGGATCTTGTTGACGAAAATTGTTACGAGTTTCGAGACCAGTCACT
TGATGGTGCTAAGAATCTAACGGTTGGTGAATTGGAAGAAAATGAATGTT
ATGATATGCGTATAACCGTCAGAAAATCCGATGATGGAGTGGTTGTTTAC
ATTAGAGAAGCTATTATAACAGAAATCAAAGAAGAAGATAAGTTGGTGGT
ATCCGGTCAAAACTATGTGATTCAAGATTTTGAAAACTTAAGAGTTTTGA
TGTCTCAATCAACGTATCTGGCGGATGCACTTTGATTTTTGATAACAGTT
ACAAGTTGATTAATATTCAATTACGCAAATCTAACAGACAATGGAATGAT
TTTTCGCCAAATGTTGGACCGCATCATCACAATTTCATTACAGTTGATAA
ATTGAAGCTTGGAAGTTTTTATGCGTTTCGTGGCATTTTTTTGAACCAGG
CAGGAGAAGTGGTCATCTTCGAAACAAAAGAAGACTTACAAATCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025968XLOC_025968Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042084-exon-sc0003197-1575043694:5196..5453TCONS_00042084-exon-sc0003197-1575043694:5196..5453Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1575043694:4848..4917TCONS_00042084-exon-sc0003197-1575043694:4848..4917Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1575043694:4043..4317TCONS_00042084-exon-sc0003197-1575043694:4043..4317Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1575043694:1..980TCONS_00042084-exon-sc0003197-1575043694:1..980Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1510915933:5196..5453TCONS_00042084-exon-sc0003197-1510915933:5196..5453Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1510915933:4848..4917TCONS_00042084-exon-sc0003197-1510915933:4848..4917Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1510915933:4043..4317TCONS_00042084-exon-sc0003197-1510915933:4043..4317Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1510915933:1..980TCONS_00042084-exon-sc0003197-1510915933:1..980Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1491911889:5196..5453TCONS_00042084-exon-sc0003197-1491911889:5196..5453Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1491911889:4848..4917TCONS_00042084-exon-sc0003197-1491911889:4848..4917Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1491911889:4043..4317TCONS_00042084-exon-sc0003197-1491911889:4043..4317Clytia hemisphaericaexon
TCONS_00042084-exon-sc0003197-1491911889:1..980TCONS_00042084-exon-sc0003197-1491911889:1..980Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00042084-proteinTCONS_00042084-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003197supercontigsc0003197:1..5453 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.177836 0.115433 2.59788 1.45906 1.56823 2.65497 3.80931 4.63292 3.1667 3.24877 7.00159 5.48189 3.72475 4.58718 3.21092 3.11026 2.06691 3.90344 2.4573 2.23165 1.60571 2.00904 12.1205 10.7023 5.90103 5.2707 2.68753 1.63722
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00042084 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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