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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042064 ID=TCONS_00042064|Name=TCONS_00042064|organism=Clytia hemisphaerica|type=transcript|length=622bp
CAACAAGTCACCAACTGCAAATATTCTGGTCAATGACGATGTTCCATTTC
CAGGGACATATTGGTGCAAATGCTTCATGATCATATATATGCCTCGATTG
GTGTTTTCGTTTTCTTGGATGATACCAACTGAAGTCTAAATGTTCATCAT
ATGCGTGCGAAATATACGTTGGAACAAATTTCTTCATCCAACTTAGACCA
GGGATGTTTTTGATCAGGTCTCTGGCCATCAAGATCTTGAACTCTTTACG
AAGTTGGATATCATCTTTCTCTGATGGAAAGCATAACGTAATGTCTGGTG
CTGGGTTGTCGTCAGTGGTTAAATGTTTGAGAGCGTCTGGAATCGGAATG
CGACATTTAACCTttggttgaaaatgaagaaaaaacaattttatcagata
aaaatagtaaaaagtaattatatcaaataaaaatattgtgaATTAATGAA
TTACTGTATGAAACTTTCTGCAAAACCGACGTCtaatttatgaattttaa
aCTCAATACATATTTGGACTTACAGCAATAGCATGACACAAATGCAAAtc
ctgatttgattttgatgttgTATAATGTCTACGTTTTAGCATTATATCAA
CGTTGTCATCCACCAACATGAA Run BLAST on NCBI transcript from alignment at sc0003180:2438..3302+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042064 ID=TCONS_00042064|Name=TCONS_00042064|organism=Clytia hemisphaerica|type=transcript|length=865bp|location=Sequence derived from alignment at sc0003180:2438..3302+ (Clytia hemisphaerica)
CAACAAGTCACCAACTGCAAATATTCTGGTCAATGACGATGTTCCATTTC
CAGGGACATATTGGTGCAAATGCTTCATGATCATATATATGCCTCGATTG
GTGTTTTCGTTTTCTTGGATGATACCAACTGAAGTCTAAATGGTAAGGAG
TAAAATTGAGACTCTTATCTGATAAATATAGTCTATATAATCTGAGTGTA
AGTTGGTGTTCGTCATATCCAATTATAATTGATTCTGAACGTCTGACCCT
CCTTGATGCATGATTGTCATATTTTTAGCATTATTAGTACCTGTTTTCTT
GTATTGTAAAcattgaaaagttgaaattaattAACATGCTTTCAAACAGC
TTCTAACATActatttctgatttctttttaacCAGTTCATCATATGCGTG
CGAAATATACGTTGGAACAAATTTCTTCATCCAACTTAGACCAGGGATGT
TTTTGATCAGGTCTCTGGCCATCAAGATCTTGAACTCTTTACGAAGTTGG
ATATCATCTTTCTCTGATGGAAAGCATAACGTAATGTCTGGTGCTGGGTT
GTCGTCAGTGGTTAAATGTTTGAGAGCGTCTGGAATCGGAATGCGACATT
TAACCTttggttgaaaatgaagaaaaaacaattttatcagataaaaatag
taaaaagtaattatatcaaataaaaatattgtgaATTAATGAATTACTGT
ATGAAACTTTCTGCAAAACCGACGTCtaatttatgaattttaaaCTCAAT
ACATATTTGGACTTACAGCAATAGCATGACACAAATGCAAAtcctgattt
gattttgatgttgTATAATGTCTACGTTTTAGCATTATATCAACGTTGTC
ATCCACCAACATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042064-exon-sc0003180-1491911889:2438..2579 | TCONS_00042064-exon-sc0003180-1491911889:2438..2579 | Clytia hemisphaerica | exon |
| TCONS_00042064-exon-sc0003180-1510915933:2438..2579 | TCONS_00042064-exon-sc0003180-1510915933:2438..2579 | Clytia hemisphaerica | exon |
| TCONS_00042064-exon-sc0003180-1575043694:2438..2579 | TCONS_00042064-exon-sc0003180-1575043694:2438..2579 | Clytia hemisphaerica | exon |
| TCONS_00042064-exon-sc0003180-1491911889:2823..3302 | TCONS_00042064-exon-sc0003180-1491911889:2823..3302 | Clytia hemisphaerica | exon |
| TCONS_00042064-exon-sc0003180-1510915933:2823..3302 | TCONS_00042064-exon-sc0003180-1510915933:2823..3302 | Clytia hemisphaerica | exon |
| TCONS_00042064-exon-sc0003180-1575043694:2823..3302 | TCONS_00042064-exon-sc0003180-1575043694:2823..3302 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003180 | supercontig | sc0003180:2438..3302 + |
Blast
The following BLAST results are available for this feature:
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