|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00042030 ID=TCONS_00042030|Name=TCONS_00042030|organism=Clytia hemisphaerica|type=transcript|length=1361bp
GTTCGAATTCATAAGTGCTCTTTCAAAACTACCATGATAAGATTTAAAAT
ATTGACCTGTAAGAGGTGCTGAGGAAATGCTGAAACACATTCAAAATGTT
ATGCTATCACTCCACTGTCACCTCTGTACGTAATTTTCCCTCGTGTATCA
TCAGCCAGTGAAGTGTATTCTTGAACAAGACAGCTAATTCTGCTTTGATT
TAACTAAGCAGGGACCACGGCAGTATGGAAGGGGGCAGCCTTGCTTTGcc
cgaccacattttttcaaGGCAAAAGGAAAATTTACTAATCAATCCAAATT
CTGCTTTAATAAACAGACCCGGAGAAACGACCGTAAATATGTAGGGGCTG
AAAACCTATTAAATGAGTTAAATTTCACTAGACCAGGATATGGAGAAAAT
AGTGCATTTTGCTGAAAAGAAGCGAGGCTAAAGTGAAGCCTCCTCTNTTA
AATTTCACTAGACCAGGATATGGAGAAAATAGTGCATTTTGCTGAAAAGA
AGCGAGGCTAAAGTGAAGCCTCCTCTGCCTGCTTCCACCGGGTCTGAATA
GTCTTGAAAAAGACCTATTTTAGTTGATCAAGATTGATTGCAGGGTTtag
attataattttttttccatctgtacctccttagtcactatactCTATCAC
TTTCAAAGTTGAGCCGCAGACTAATAATCtaagttcttgaaaataaaatc
ttgttgacaggaatttaatttgacccgcCCTTTACTGAGTCAGTAAATTC
GAGTAAATTCGTAAATCGCGAGACGCCACTTTCTGGATATGAATATTATG
TTCCAGCCAAGGGTGcatttttttatacaaaagagggttgaaaaaaatac
aaaaattatatttgagtCCCATGGACTGgaaatttctactttttgctgct
tgaaagatcaaaatttggtcaaattatcCCCTATAAGCCCTATAAGGCTC
ATAGAATTCGCttttttttccctctttttcaGTCCCGCTAAGAAAGTTGG
GCGCGGTACATATTCGTATGTCGTAAGCTCGCAACCCTTAGTAGTACCCT
Ggggaaatttggacaaaaattttgggaaaatggtctctttaagggtcgta
aaaacgcTTCTCTAAGGGCCAGTTTTCCAACTTTAGGACGGACATAACAG
TCACCTCGAACACCTCAAAGGACCTGATATGATATGTTTGTTTTTCTCAG
CGTCAATTGCCAAAAATACATGTCTCTAAGACTAGGTAAGGTCTATCCTA
cgacaaaatctttttaaatatGGGGCAAATTGTTTCGCTGCTATTTTTCA
CATCTTTGCCCCAAGTGCCACCAGGTTCCAAATTGTTTCTACAAAATGTG
TCTAAAAGTGG Run BLAST on NCBI transcript from alignment at sc0003156:6125..7485 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00042030 ID=TCONS_00042030|Name=TCONS_00042030|organism=Clytia hemisphaerica|type=transcript|length=1361bp|location=Sequence derived from alignment at sc0003156:6125..7485 (Clytia hemisphaerica)
CCACTTTTAGACACATTTTGTAGAAACAATTTGGAACCTGGTGGCACTTG
GGGCAAAGATGTGAAAAATAGCAGCGAAACAATTTGCCCCatatttaaaa
agattttgtcgTAGGATAGACCTTACCTAGTCTTAGAGACATGTATTTTT
GGCAATTGACGCTGAGAAAAACAAACATATCATATCAGGTCCTTTGAGGT
GTTCGAGGTGACTGTTATGTCCGTCCTAAAGTTGGAAAACTGGCCCTTAG
AGAAgcgtttttacgacccttaaagagaccattttcccaaaatttttgtc
caaatttcccCAGGGTACTACTAAGGGTTGCGAGCTTACGACATACGAAT
ATGTACCGCGCCCAACTTTCTTAGCGGGACtgaaaaagagggaaaaaaaa
GCGAATTCTATGAGCCTTATAGGGCTTATAGGGgataatttgaccaaatt
ttgatctttcaagcagcaaaaagtagaaatttcCAGTCCATGGGactcaa
atataatttttgtatttttttcaaccctcttttgtataaaaaaatgCACC
CTTGGCTGGAACATAATATTCATATCCAGAAAGTGGCGTCTCGCGATTTA
CGAATTTACTCGAATTTACTGACTCAGTAAAGGgcgggtcaaattaaatt
cctgtcaacaagattttattttcaagaacttaGATTATTAGTCTGCGGCT
CAACTTTGAAAGTGATAGagtatagtgactaaggaggtacagatggaaaa
aaaattataatctaAACCCTGCAATCAATCTTGATCAACTAAAATAGGTC
TTTTTCAAGACTATTCAGACCCGGTGGAAGCAGGCAGAGGAGGCTTCACT
TTAGCCTCGCTTCTTTTCAGCAAAATGCACTATTTTCTCCATATCCTGGT
CTAGTGAAATTTAANAGAGGAGGCTTCACTTTAGCCTCGCTTCTTTTCAG
CAAAATGCACTATTTTCTCCATATCCTGGTCTAGTGAAATTTAACTCATT
TAATAGGTTTTCAGCCCCTACATATTTACGGTCGTTTCTCCGGGTCTGTT
TATTAAAGCAGAATTTGGATTGATTAGTAAATTTTCCTTTTGCCttgaaa
aaatgtggtcgggCAAAGCAAGGCTGCCCCCTTCCATACTGCCGTGGTCC
CTGCTTAGTTAAATCAAAGCAGAATTAGCTGTCTTGTTCAAGAATACACT
TCACTGGCTGATGATACACGAGGGAAAATTACGTACAGAGGTGACAGTGG
AGTGATAGCATAACATTTTGAATGTGTTTCAGCATTTCCTCAGCACCTCT
TACAGGTCAATATTTTAAATCTTATCATGGTAGTTTTGAAAGAGCACTTA
TGAATTCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00042030-exon-sc0003156-1491911889:6125..7485 | TCONS_00042030-exon-sc0003156-1491911889:6125..7485 | Clytia hemisphaerica | exon |
| TCONS_00042030-exon-sc0003156-1510915933:6125..7485 | TCONS_00042030-exon-sc0003156-1510915933:6125..7485 | Clytia hemisphaerica | exon |
| TCONS_00042030-exon-sc0003156-1575043694:6125..7485 | TCONS_00042030-exon-sc0003156-1575043694:6125..7485 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003156 | supercontig | sc0003156:6125..7485 . |
Blast
The following BLAST results are available for this feature:
|
