TCONS_00041978 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041978
Unique NameTCONS_00041978
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041978 ID=TCONS_00041978|Name=TCONS_00041978|organism=Clytia hemisphaerica|type=transcript|length=207bp
ATCAGCCTTTTAATATTGCCCCAACGGCCTAAGTGGGCAAAAAGCTGGTC
ACATACCTATAAAAGAAAGTGCAGTCTTTGGGTCGATCAGCTTTTCAGTT
ACTTAAAATTGCTTGGGAGTCACACATGAGAGAGAGGTGAACCTTCTGAT
GAACTGAACAGGCCTATCCAGGACAGCATTCAATATCATAAGATAGGGAA
ATCACTG
Run BLAST on NCBI

transcript from alignment at sc0003130:462..668

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041978 ID=TCONS_00041978|Name=TCONS_00041978|organism=Clytia hemisphaerica|type=transcript|length=207bp|location=Sequence derived from alignment at sc0003130:462..668 (Clytia hemisphaerica)
CAGTGATTTCCCTATCTTATGATATTGAATGCTGTCCTGGATAGGCCTGT
TCAGTTCATCAGAAGGTTCACCTCTCTCTCATGTGTGACTCCCAAGCAAT
TTTAAGTAACTGAAAAGCTGATCGACCCAAAGACTGCACTTTCTTTTATA
GGTATGTGACCAGCTTTTTGCCCACTTAGGCCGTTGGGGCAATATTAAAA
GGCTGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025867XLOC_025867Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041978-exon-sc0003130-1491911889:462..668TCONS_00041978-exon-sc0003130-1491911889:462..668Clytia hemisphaericaexon
TCONS_00041978-exon-sc0003130-1510915933:462..668TCONS_00041978-exon-sc0003130-1510915933:462..668Clytia hemisphaericaexon
TCONS_00041978-exon-sc0003130-1575043694:462..668TCONS_00041978-exon-sc0003130-1575043694:462..668Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003130supercontigsc0003130:462..668 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041978 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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