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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041962 ID=TCONS_00041962|Name=TCONS_00041962|organism=Clytia hemisphaerica|type=transcript|length=557bp
ttataggAAAAAATTGTTGGGAGAGTTGTGGTGGCAAGGGAGGTCACTGT
CATGGATTTTGTGGTGTCAATGGTCGTTGCTGTCGTAAAGGATGGCTTGA
CCATGGGTGTCAAGGGATGGCTGCTGCTTGTAACGGGCATCATTGTTGTA
CTACTCAAAGACAAGAAGTTTTAAATCACGGTAAAAATTGTTGGGCTCCG
TGCAACGGGAAAGGTGGCGAGTGTTTTACAGGATTCTGTGGAAAGGATGG
AATATGCTGTAGACAGGGCTGGCATGATTACAAATGTGGACGAAGCATTG
GAGCATGCGATGGATATCATTGTTGTGTAGCAACCAGGTCTCTTGGAAAA
CAATCATAATACCGGTGTTGATGTAGAAAATTGCTCCATTGCAATGAACA
TTTAATTGGCTGTGttgtttatgtttttatgtGTTAATGAGCATTCCTTG
TATAGTCTTTAAGTTTACATGTGTCTCTTGAGTCCTCTTTTGTTTAGTGG
TCCCTTTGTTTTGAGTgtctttcccagctggcacacgacgttgtttcaac
attaaTC Run BLAST on NCBI transcript from alignment at sc0003119:13069..14068+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041962 ID=TCONS_00041962|Name=TCONS_00041962|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at sc0003119:13069..14068+ (Clytia hemisphaerica)
ttataggAAAAAATTGTTGGGAGAGTTGTGGTGGCAAGGGAGGTCACTGT
CATGGATTTTGTGGTGTCAATGGTCGTTGCTGTCGTAAAGGATGGCTTGA
CCATGGGTGTCAAGGGATGGCTGCTGCTTGTAACGGGCATCATTGTTGTA
CTACTCAAAGACAAGAAGTTTTAAATCACGGTAAGATTAACTATTATATC
GGAAGAAATATGTTACGTTCTAAGACTTTTATAAATTAAAGCCACAACCG
CACTTTCTCCAACTAACAGCACACCTGTAGTCATGGATTATTGAAAATAC
TTAAGTAATGTCAATTGAATGTCATTCTGGTCAGGGAAGACGGACAAAAA
ggacaattttcattttattttggtcacgtgatcaaCATCGATGGGTAATC
ACAATTCTCTTCCACTTCAATGATTTAATTTCATTGACCACTCTAACACG
GACTTTGTATGATCGAAAAGAATGCGCAAAACAAAATATTAACCTCGAAA
TTCAAAACAAGCCAAACACCCGAACCATGGAGAGATGTTCTTATTATTGC
TCAGGTACTGATTACATATGTTTTCGTTAATGTTGAAAcgttaaatttaa
ttttaagagATCTTTTTTCATAGGTAAAAATTGTTGGGCTCCGTGCAACG
GGAAAGGTGGCGAGTGTTTTACAGGATTCTGTGGAAAGGATGGAATATGC
TGTAGACAGGGCTGGCATGATTACAAATGTGGACGAAGCATTGGAGCATG
CGATGGATATCATTGTTGTGTAGCAACCAGGTCTCTTGGAAAACAATCAT
AATACCGGTGTTGATGTAGAAAATTGCTCCATTGCAATGAACATTTAATT
GGCTGTGttgtttatgtttttatgtGTTAATGAGCATTCCTTGTATAGTC
TTTAAGTTTACATGTGTCTCTTGAGTCCTCTTTTGTTTAGTGGTCCCTTT
GTTTTGAGTgtctttcccagctggcacacgacgttgtttcaacattaaTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041962-exon-sc0003119-1491911889:13069..13248 | TCONS_00041962-exon-sc0003119-1491911889:13069..13248 | Clytia hemisphaerica | exon |
| TCONS_00041962-exon-sc0003119-1510915933:13069..13248 | TCONS_00041962-exon-sc0003119-1510915933:13069..13248 | Clytia hemisphaerica | exon |
| TCONS_00041962-exon-sc0003119-1575043694:13069..13248 | TCONS_00041962-exon-sc0003119-1575043694:13069..13248 | Clytia hemisphaerica | exon |
| TCONS_00041962-exon-sc0003119-1491911889:13692..14068 | TCONS_00041962-exon-sc0003119-1491911889:13692..14068 | Clytia hemisphaerica | exon |
| TCONS_00041962-exon-sc0003119-1510915933:13692..14068 | TCONS_00041962-exon-sc0003119-1510915933:13692..14068 | Clytia hemisphaerica | exon |
| TCONS_00041962-exon-sc0003119-1575043694:13692..14068 | TCONS_00041962-exon-sc0003119-1575043694:13692..14068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003119 | supercontig | sc0003119:13069..14068 + |
Blast
The following BLAST results are available for this feature:
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