|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041928 ID=TCONS_00041928|Name=TCONS_00041928|organism=Clytia hemisphaerica|type=transcript|length=913bp
TAAAGATCAGAAGCGTGCAATTCAAAAGGGTGTTCTGAGTGATGCTATTC
ACACGTCGGCAAGCTCTCAACTAGTAACTTCTNAGTCAGAAAAACAATAT
ACTTATGGCAGTCGCAAAATATTTCTGCATAATGAACAATAATTGCACGG
AATAAAACATTAATTTCTGTTCGATTTCTTTTCATGGATTAACGAGGTAG
GTAACACCGCAATAACTGTCATTAGTCGAAAGATAATTGTTGATTTAGAA
GGTACTGTATACGTTATAAAGGCTATAGTTTGCAAACAGAGGATATGTGT
GAAGATGTCTTTATTTTTGGTGATAGATAAGCTGATTTCTCAAGAACTTT
GAGAGTAGACTGCACTCTCAAAATCCTTTTgacatcaaaatttaatttgt
taAGCTAGAtctcgttcttttttttcactgtTCTTAAAACTGTACGGTTA
GATGTCCCAGACATGTCCACTTTTCAAAATCGAATTATTGTTCGGAATTT
TCCTATCAAAATGCTTAAAATAATACATTTCGAGCCAGAAAGACATGATT
TCGTATGTGATTTAAAAGGAATAACTACTGCCACTTGAAGAAATATGTAG
ACATAAAATGTGGGTCTGATTCTTTTTCGGCGGATAAAATCATCAACCTC
TTACTTTTATAGTTTGATAATTTCCTTTATaagttctcaaaaaaaaaaaa
aaaaaaaaaaaaattaaaaagaaNACTTGAAGAAATATGTAGACATAAAA
TGTGGGTCTGATTCTTTTTCGGCGGATAAAATCATCAACCTCTTACTTTT
ATAGTTTGATAATTGGCCCAGCGTTAGCGAACGGGCCTTTCAAAAGCAAC
TGTCTGTTTGTCcgtcccactttcgttttcgtttttacAAAAACCGCGCT
CCTTCTAAATTGT Run BLAST on NCBI transcript from alignment at sc0003102:11608..12520 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041928 ID=TCONS_00041928|Name=TCONS_00041928|organism=Clytia hemisphaerica|type=transcript|length=913bp|location=Sequence derived from alignment at sc0003102:11608..12520 (Clytia hemisphaerica)
ACAATTTAGAAGGAGCGCGGTTTTTgtaaaaacgaaaacgaaagtgggac
gGACAAACAGACAGTTGCTTTTGAAAGGCCCGTTCGCTAACGCTGGGCCA
ATTATCAAACTATAAAAGTAAGAGGTTGATGATTTTATCCGCCGAAAAAG
AATCAGACCCACATTTTATGTCTACATATTTCTTCAAGTNttctttttaa
tttttttttttttttttttttttttgagaacttATAAAGGAAATTATCAA
ACTATAAAAGTAAGAGGTTGATGATTTTATCCGCCGAAAAAGAATCAGAC
CCACATTTTATGTCTACATATTTCTTCAAGTGGCAGTAGTTATTCCTTTT
AAATCACATACGAAATCATGTCTTTCTGGCTCGAAATGTATTATTTTAAG
CATTTTGATAGGAAAATTCCGAACAATAATTCGATTTTGAAAAGTGGACA
TGTCTGGGACATCTAACCGTACAGTTTTAAGAacagtgaaaaaaaagaac
gagaTCTAGCTtaacaaattaaattttgatgtcAAAAGGATTTTGAGAGT
GCAGTCTACTCTCAAAGTTCTTGAGAAATCAGCTTATCTATCACCAAAAA
TAAAGACATCTTCACACATATCCTCTGTTTGCAAACTATAGCCTTTATAA
CGTATACAGTACCTTCTAAATCAACAATTATCTTTCGACTAATGACAGTT
ATTGCGGTGTTACCTACCTCGTTAATCCATGAAAAGAAATCGAACAGAAA
TTAATGTTTTATTCCGTGCAATTATTGTTCATTATGCAGAAATATTTTGC
GACTGCCATAAGTATATTGTTTTTCTGACTNAGAAGTTACTAGTTGAGAG
CTTGCCGACGTGTGAATAGCATCACTCAGAACACCCTTTTGAATTGCACG
CTTCTGATCTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041928-exon-sc0003102-1491911889:11608..12520 | TCONS_00041928-exon-sc0003102-1491911889:11608..12520 | Clytia hemisphaerica | exon |
| TCONS_00041928-exon-sc0003102-1510915933:11608..12520 | TCONS_00041928-exon-sc0003102-1510915933:11608..12520 | Clytia hemisphaerica | exon |
| TCONS_00041928-exon-sc0003102-1575043694:11608..12520 | TCONS_00041928-exon-sc0003102-1575043694:11608..12520 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003102 | supercontig | sc0003102:11608..12520 . |
Blast
The following BLAST results are available for this feature:
|
