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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041878 ID=TCONS_00041878|Name=TCONS_00041878|organism=Clytia hemisphaerica|type=transcript|length=810bp
TTTTTATCTTATAGCAAGCCCTTAGTCTTTTTGTAGATGGTGACTTTCTT
TCTTCGGCACTGATGATGTTTTTAAATTACTTTACATAAATCTTAATATA
GTTTGACGTTTGATTATTCTTCACTATGACGACATGACGATTTTGACAGT
TGACGTTTACAATTATTTCACGGTAAGCATAAGACTTGACTCGTACATCC
AAGAGTTTCTGGGTTATTTGACTGAAATATACGATGCTGTTCTATGAGAG
ATAAAGATGGAGATGAAAAGACAGGGAAACTTTGAAGTACTTTTTGAAAC
TCTGTTTTAAAATGCATGTGCTAAACATTTGCTAAACTCGATTTTCTCCG
AAATGGTACATAATAACAAAGAAACTGCCAAAATTTGTTTTCTGACCCGT
ACTTAGTCAAAATCCCTAACTAAGATATTTAAACTTAGGCCatttaaaca
cccccttctcacagaactGTTTAATATTCTCATCGTACATCGTTTACATT
ATAATATTCTGTTCTGTTTCTGAAACACCNCtagaaattacaaaaaacaa
attttaagttGCAAATCTTCAAATGATGGGTGAACCATCTAATGATACAG
ACAATGGATTCAATATTGATGATAACAATTCTTTATGGGAAGAAATCGAT
AACCAGACAAATACAGCGTTGGGAAACATTATTATGTGCGGCGAGGCGTG
TCAATTTTNtagactagtaaactagtcggttattacttataaccttataa
taaaactgtcaatcaaataatgtaaacactaattaaatattcagcgcgcg
tgagagaaaa Run BLAST on NCBI transcript from alignment at sc0003062:4063..5269+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041878 ID=TCONS_00041878|Name=TCONS_00041878|organism=Clytia hemisphaerica|type=transcript|length=1207bp|location=Sequence derived from alignment at sc0003062:4063..5269+ (Clytia hemisphaerica)
TTTTTATCTTATAGCAAGCCCTTAGTCTTTTTGTAGATGGTGACTTTCTT
TCTTCGGCACTGATGATGTTTTTAAATTACTTTACATAAATCTTAATATA
GTTTGACGTTTGATTATTCTTCACTATGACGACATGACGATTTTGACAGT
TGACGTTTACAATTATTTCACGGTAAGCATAAGACTTGACTCGTACATCC
AAGAGTTTCTGGGTTATTTGACTGAAATATACGATGCTGTTCTATGAGAG
ATAAAGATGGAGATGAAAAGACAGGGAAACTTTGAAGTACTTTTTGAAAC
TCTGTTTTAAAATGCATGTGCTAAACATTTGCTAAACTCGATTTTCTCCG
AAATGGTACATAATAACAAAGAAACTGCCAAAATTTGTTTTCTGACCCGT
ACTTAGTCAAAATCCCTAACTAAGATATTTAAACTTAGGCCatttaaaca
cccccttctcacagaactGTTTAATATTCTCATCGTACATCGTTTACATT
ATAATATTCTGTTCTGTTTCTGAAACACCNCtagaaattacaaaaaacaa
attttaagttGCAAATCTTCAAATGATGGGTGAACCATCTAATGATACAG
ACAATGGATTCAATATTGATGATAACAATTCTTTATGGGAAGGTATACGT
TACCTatctttagtttttattttcataaatttatcATTGACCCCCCCCCT
CCCTTAATATAAGTNTATTGATGGTAACAATTCTTTATGGGAAGGTATAC
GTTACCTAgctttagtttttattttcataaatttatcATTGACCCCCCAC
CCCTTAATATAAGggggactttaaattttgagataaaCTTCAAGAGGTAa
taacttcaaaacttttgaaataagtCACAAGGGCGGTCAGCTTTCTTTAA
TTACTAATACTTACTTCATTGGATATCTCAGCTGACGATCTAATAAAGAC
TGTATGACAATTGACGTTATACCTTCTTTCTTATTGTTCACCCTCATGCC
TTGTGAGACTATTCTAAAGTTCTTTAATTGTATTTTCAGAAATCGATAAC
CAGACAAATACAGCGTTGGGAAACATTATTATGTGCGGCGAGGCGTGTCA
ATTTTNtagactagtaaactagtcggttattacttataaccttataataa
aactgtcaatcaaataatgtaaacactaattaaatattcagcgcgcgtga
gagaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041878-exon-sc0003062-1491911889:4063..4704 | TCONS_00041878-exon-sc0003062-1491911889:4063..4704 | Clytia hemisphaerica | exon |
| TCONS_00041878-exon-sc0003062-1510915933:4063..4704 | TCONS_00041878-exon-sc0003062-1510915933:4063..4704 | Clytia hemisphaerica | exon |
| TCONS_00041878-exon-sc0003062-1575043694:4063..4704 | TCONS_00041878-exon-sc0003062-1575043694:4063..4704 | Clytia hemisphaerica | exon |
| TCONS_00041878-exon-sc0003062-1491911889:5102..5269 | TCONS_00041878-exon-sc0003062-1491911889:5102..5269 | Clytia hemisphaerica | exon |
| TCONS_00041878-exon-sc0003062-1510915933:5102..5269 | TCONS_00041878-exon-sc0003062-1510915933:5102..5269 | Clytia hemisphaerica | exon |
| TCONS_00041878-exon-sc0003062-1575043694:5102..5269 | TCONS_00041878-exon-sc0003062-1575043694:5102..5269 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003062 | supercontig | sc0003062:4063..5269 + |
Blast
The following BLAST results are available for this feature:
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