TCONS_00041877 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041877
Unique NameTCONS_00041877
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length245

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041877 ID=TCONS_00041877|Name=TCONS_00041877|organism=Clytia hemisphaerica|type=transcript|length=245bp
TCCGGGAAAAATCATTGGCGTTATTAAGTAAGAGAGGTAAGGCGCTATCC
ATGTTGAGGATATAGGACATCCAGGGGGGTAATGTTATTTCTTTTCACAA
GAGACGTCCTAGAGGATGGGGAAAATTTAACCTTGAAATCCAAGGGGTTG
GAGAAAAATAGGGCTTGGACATCCCGGGGtttaacaattttgaaaatgga
tATCCTCAACGTGGGGGGTACGGATTTTaactggaaaagcccatt
Run BLAST on NCBI

transcript from alignment at sc0003060:1..245

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041877 ID=TCONS_00041877|Name=TCONS_00041877|organism=Clytia hemisphaerica|type=transcript|length=245bp|location=Sequence derived from alignment at sc0003060:1..245 (Clytia hemisphaerica)
aatgggcttttccagttAAAATCCGTACCCCCCACGTTGAGGATatccat
tttcaaaattgttaaaCCCCGGGATGTCCAAGCCCTATTTTTCTCCAACC
CCTTGGATTTCAAGGTTAAATTTTCCCCATCCTCTAGGACGTCTCTTGTG
AAAAGAAATAACATTACCCCCCTGGATGTCCTATATCCTCAACATGGATA
GCGCCTTACCTCTCTTACTTAATAACGCCAATGATTTTTCCCGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025774XLOC_025774Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041877-exon-sc0003060-1491911889:1..245TCONS_00041877-exon-sc0003060-1491911889:1..245Clytia hemisphaericaexon
TCONS_00041877-exon-sc0003060-1510915933:1..245TCONS_00041877-exon-sc0003060-1510915933:1..245Clytia hemisphaericaexon
TCONS_00041877-exon-sc0003060-1575043694:1..245TCONS_00041877-exon-sc0003060-1575043694:1..245Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003060supercontigsc0003060:1..245 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	7.81833	11.3749	14.7002	14.8627	2.23202	3.14531	3.00647	1.6585	0	0	1.26602	1.07731	4.30552	3.4966	0	0	1.01659	3.85441	1.78383	0.985442	3.20868	5.85721	5.07586	1.21473	1.30333	2.42711
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041877 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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