TCONS_00041875 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041875
Unique NameTCONS_00041875
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length139

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041875 ID=TCONS_00041875|Name=TCONS_00041875|organism=Clytia hemisphaerica|type=transcript|length=139bp
tgaaaatctacaatcagtataaattaaacgtactgaaatcaaaaatttga
tgttctttCTCTTCCGTCCTTCCTTTCTGGCATCTTTGTGATAATCATTC
CAAACGTTTCCAGTATGATTGCTATTTGAAGTGTTAANN
Run BLAST on NCBI

transcript from alignment at sc0003058:1570..1708

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041875 ID=TCONS_00041875|Name=TCONS_00041875|organism=Clytia hemisphaerica|type=transcript|length=139bp|location=Sequence derived from alignment at sc0003058:1570..1708 (Clytia hemisphaerica)
NNTTAACACTTCAAATAGCAATCATACTGGAAACGTTTGGAATGATTATC
ACAAAGATGCCAGAAAGGAAGGACGGAAGAGaaagaacatcaaatttttg
atttcagtacgtttaatttatactgattgtagattttca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025772XLOC_025772Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041875-exon-sc0003058-1491911889:1570..1708TCONS_00041875-exon-sc0003058-1491911889:1570..1708Clytia hemisphaericaexon
TCONS_00041875-exon-sc0003058-1510915933:1570..1708TCONS_00041875-exon-sc0003058-1510915933:1570..1708Clytia hemisphaericaexon
TCONS_00041875-exon-sc0003058-1575043694:1570..1708TCONS_00041875-exon-sc0003058-1575043694:1570..1708Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003058supercontigsc0003058:1570..1708 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041875 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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