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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041872 ID=TCONS_00041872|Name=TCONS_00041872|organism=Clytia hemisphaerica|type=transcript|length=1001bp
CCTTTTATTTAGTATAGTCATTTAGGCAATCATGACAGCCTATTGAATAG
CTAATTACTACAGCATAAGTCCTTCAATAATTAAGTCATTTAATTGATTT
GCCTTTTACAAGACATCTGTTGCCTCCAGACGAAATAATTCATTCCTTTT
GTATTGGTTGAAGGCAAGTAATGTATGCTGTAGTAATTTGTTAAGCCGCG
TTTGCCTGAAGGTCTATGCTATGAGCTAATAATAGTTGGATTATTACAAT
AAGAGGTTGTTTgctagtgtttttttttttgcttgaatcAATATTCTGCA
AAGATTTCTGAAGATACATCACTTGCCCTCAGCCATGAAAAACGGGTTGA
ATTATTTCATCTCTAGGTCACAGTTCCTTGTAAAAGGTAAATCAATAAGG
TGAtgttgtcattaaaaaatgcAGTTAGTTATTCAATAGACGTGATGGAC
TACAAAAAGAggttttctatttctataatTAATCCAATGGGTATGTATCA
TATTACTTTAAATTCAAACAGACTCGTTTCTACATCCTTGACACTAAATT
TGACTAATAATGAAAAGACAAAAGTAAGGGTTCCATTCACTTTATTAAAA
TGACCTTGGTTTATATATTaatcaatagaccttttgctgATGCTGATAAA
ACTTTGACTTTCAGATTATTCTATGACTAAGATTATGTATTGTTTTTGGA
GTCATTACCGTccactgctctaacttgggatgattggtcaaaacatggga
ttgttgatatctggcctgtattttcacttactgtttaaatctcttcgaca
acaagtttgtttttatacttCAACCAAATtcatcaatcaaactttcaccg
tcccataatcacaaccaaatgtatttttaaagcattttaatcACACACTC
GCTGCTCACATTTTGACGCCTCACAATTTTCTGATCGCATTTTATGCGTT
TCTCGTCGCAAAGATTTGTTCCTTTTGAGGTGTGGAAGCCTACCTGGTGA
G Run BLAST on NCBI transcript from alignment at sc0003056:185..1185 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041872 ID=TCONS_00041872|Name=TCONS_00041872|organism=Clytia hemisphaerica|type=transcript|length=1001bp|location=Sequence derived from alignment at sc0003056:185..1185 (Clytia hemisphaerica)
CTCACCAGGTAGGCTTCCACACCTCAAAAGGAACAAATCTTTGCGACGAG
AAACGCATAAAATGCGATCAGAAAATTGTGAGGCGTCAAAATGTGAGCAG
CGAGTGTGTgattaaaatgctttaaaaatacatttggttgtgattatggg
acggtgaaagtttgattgatgaATTTGGTTGaagtataaaaacaaacttg
ttgtcgaagagatttaaacagtaagtgaaaatacaggccagatatcaaca
atcccatgttttgaccaatcatcccaagttagagcagtggACGGTAATGA
CTCCAAAAACAATACATAATCTTAGTCATAGAATAATCTGAAAGTCAAAG
TTTTATCAGCATcagcaaaaggtctattgattAATATATAAACCAAGGTC
ATTTTAATAAAGTGAATGGAACCCTTACTTTTGTCTTTTCATTATTAGTC
AAATTTAGTGTCAAGGATGTAGAAACGAGTCTGTTTGAATTTAAAGTAAT
ATGATACATACCCATTGGATTAattatagaaatagaaaaccTCTTTTTGT
AGTCCATCACGTCTATTGAATAACTAACTgcattttttaatgacaacaTC
ACCTTATTGATTTACCTTTTACAAGGAACTGTGACCTAGAGATGAAATAA
TTCAACCCGTTTTTCATGGCTGAGGGCAAGTGATGTATCTTCAGAAATCT
TTGCAGAATATTgattcaagcaaaaaaaaaaacactagcAAACAACCTCT
TATTGTAATAATCCAACTATTATTAGCTCATAGCATAGACCTTCAGGCAA
ACGCGGCTTAACAAATTACTACAGCATACATTACTTGCCTTCAACCAATA
CAAAAGGAATGAATTATTTCGTCTGGAGGCAACAGATGTCTTGTAAAAGG
CAAATCAATTAAATGACTTAATTATTGAAGGACTTATGCTGTAGTAATTA
GCTATTCAATAGGCTGTCATGATTGCCTAAATGACTATACTAAATAAAAG
G
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041872-exon-sc0003056-1491911889:185..1185 | TCONS_00041872-exon-sc0003056-1491911889:185..1185 | Clytia hemisphaerica | exon |
| TCONS_00041872-exon-sc0003056-1510915933:185..1185 | TCONS_00041872-exon-sc0003056-1510915933:185..1185 | Clytia hemisphaerica | exon |
| TCONS_00041872-exon-sc0003056-1575043694:185..1185 | TCONS_00041872-exon-sc0003056-1575043694:185..1185 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003056 | supercontig | sc0003056:185..1185 . |
Blast
The following BLAST results are available for this feature:
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