TCONS_00041837 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041837
Unique NameTCONS_00041837
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041837 ID=TCONS_00041837|Name=TCONS_00041837|organism=Clytia hemisphaerica|type=transcript|length=146bp
ATTAAAATTAACATGGTACAGATTACTTCACTGTTTGATTGAAACATTGA
AATTAATGCATCATCTTAAGCGGTTCAAGCATAACATAAACACAACACAT
TAGAGATTATAAAAGACAACCAATATACCTGCAACTTAGAATTATC
Run BLAST on NCBI

transcript from alignment at sc0003044:6408..7008-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041837 ID=TCONS_00041837|Name=TCONS_00041837|organism=Clytia hemisphaerica|type=transcript|length=601bp|location=Sequence derived from alignment at sc0003044:6408..7008- (Clytia hemisphaerica)
ATTAAAATTAACATGGTACAGATTACTTCACTGTTTGATTGAAACATTGA
AATTAATGCATCATCTTAAGCGGTTCAAGCATAACATAAACACAAGTAAG
TAAATATGTCATTCTTTTCAAATTACCCTTACACCAGGTGACTCAGTGTG
ATAGAATTTGGCTTTGGCATTTTTCAAAAGAAAGCTTTTTACTTTTAAAG
ATCCCTCTTATACACACCATATCATGCTAAGGTTTTTTCATTCGACATTT
GCTGTAACACCCATGCAATTGTTGATATTATCTTTATTGAAATGACGAAC
ATACCCTGACTTGCTTATAACCAAAGCTCTTTCGAGTAGTTTGTTTCGCA
TTTGACTCAGGCTTTTTAATTTCATAAAAATGTAACACAAATGTAATTTC
ATTTAAACAAATTAAAAAAAAATTTTTTTAAGCCGTTTTAATTTTTGAAA
ATGGCTTCTAGGAGGGTTCTAAGATTCTAAAATTTTTCTTAAAAAATATT
AGCATCCCTATCCCTTTACAATATATTTTTCTTTTTGTTACCCTCCACAG
CACATTAGAGATTATAAAAGACAACCAATATACCTGCAACTTAGAATTAT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025743XLOC_025743Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041837-exon-sc0003044-1575043694:6914..7008TCONS_00041837-exon-sc0003044-1575043694:6914..7008Clytia hemisphaericaexon
TCONS_00041837-exon-sc0003044-1575043694:6408..6458TCONS_00041837-exon-sc0003044-1575043694:6408..6458Clytia hemisphaericaexon
TCONS_00041837-exon-sc0003044-1510915933:6914..7008TCONS_00041837-exon-sc0003044-1510915933:6914..7008Clytia hemisphaericaexon
TCONS_00041837-exon-sc0003044-1510915933:6408..6458TCONS_00041837-exon-sc0003044-1510915933:6408..6458Clytia hemisphaericaexon
TCONS_00041837-exon-sc0003044-1491911889:6914..7008TCONS_00041837-exon-sc0003044-1491911889:6914..7008Clytia hemisphaericaexon
TCONS_00041837-exon-sc0003044-1491911889:6408..6458TCONS_00041837-exon-sc0003044-1491911889:6408..6458Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003044supercontigsc0003044:6408..7008 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041837 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top