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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041826 ID=TCONS_00041826|Name=TCONS_00041826|organism=Clytia hemisphaerica|type=transcript|length=550bp
AGGAGGTCACTTGGCAAGTATTAAGAGCAAGCAGGAGAATGATTTTGTGT
ATGGATTGACACCTGGCGGACGCAATAATTACTGGATAGGTTTGTCTGAT
AAACAGGTAGAAGGCTCATTCACTCGGTGGAGTGACGGAAAAACTGCAAC
ATACACGAATTTTGAAAACAGACAGCCAAACAATTCTGGAAATCAAGACT
GTGTATCATTTTTCGAGGACGCTGCTGAGAAATGGAATGATTGGGGGTGC
AGTAAATCCTTTACTTTCGTATGCAAAATTTCACAATAAAAATTCTCTGA
AGAAACTAAATTGTACATCAGTTAAAATCTCGCTCCTATTTTACTTAAAG
ACCAGTTAGATTATTATCagtatttttggattttttcaatttataatTTT
GCATTTCTTGTTGAAGATAAACAAACTCGAACGCAGCTTCTTTACTccct
tttttatgattctgatagcactCACGAAAAAAGAAGGAGATTTTAccacg
tccatcagtaaaatcaaataGTGGTGCAGatgctctgggtacgagattag Run BLAST on NCBI transcript from alignment at sc0003038:8..1046- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041826 ID=TCONS_00041826|Name=TCONS_00041826|organism=Clytia hemisphaerica|type=transcript|length=1039bp|location=Sequence derived from alignment at sc0003038:8..1046- (Clytia hemisphaerica)
AGGAGGTCACTTGGCAAGTATTAAGAGCAAGCAGGAGAATGATTTTGTGT
ATGGATTGACACCTGGCGGACGCAATAATTACTGGATAGGTAAGTTTAGC
TAACAAGAGATGATAGGTTGAAAGTTTATTCAGAATTCAACGAGTATAAA
ATAGAAAGTTTTCAGAGTGGCATCACCTTCCCGCAGCAGACCCAATGGAT
AAAATAGCCAAAATATCGTCCCCCAGTCGAAAAATCATCCTTACTGCAAA
ATAATGCGTGCTATTTTTTCCATCCCCACAAATTATGTTTAAAAATGGAA
ATTCAAACCCCCCCCTTCGAGTTTCAGTTAGTTATTATCCTTGCTGGTTG
AAAAAATCTGTAAAAAGGGATTGTATAGTGTAAAATTTCAAATGCTGGAC
CTGGAGCCGGGACCTGGAAGCATTCTTATTCTACATATCTTTTAAGGCTT
ATTATAAGAGATGCAGCAAGGAGCAAAGTCGGTGTTCGGTTAACTTTTGT
GAACGAATCTTTGATATTAAGCAGATATTCTTTTTAAATAATAGCAGAGA
ATCTACAGCAACTTTTATGTTCTTTTAGGTTTGTCTGATAAACAGGTAGA
AGGCTCATTCACTCGGTGGAGTGACGGAAAAACTGCAACATACACGAATT
TTGAAAACAGACAGCCAAACAATTCTGGAAATCAAGACTGTGTATCATTT
TTCGAGGACGCTGCTGAGAAATGGAATGATTGGGGGTGCAGTAAATCCTT
TACTTTCGTATGCAAAATTTCACAATAAAAATTCTCTGAAGAAACTAAAT
TGTACATCAGTTAAAATCTCGCTCCTATTTTACTTAAAGACCAGTTAGAT
TATTATCAGTATTTTTGGATTTTTTCAATTTATAATTTTGCATTTCTTGT
TGAAGATAAACAAACTCGAACGCAGCTTCTTTACTCCCTTTTTTATGATT
CTGATAGCACTCACGAAAAAAGAAGGAGATTTTACCACGTCCATCAGTAA
AATCAAATAGTGGTGCAGATGCTCTGGGTACGAGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041826-exon-sc0003038-1575043694:958..1046 | TCONS_00041826-exon-sc0003038-1575043694:958..1046 | Clytia hemisphaerica | exon |
| TCONS_00041826-exon-sc0003038-1575043694:8..468 | TCONS_00041826-exon-sc0003038-1575043694:8..468 | Clytia hemisphaerica | exon |
| TCONS_00041826-exon-sc0003038-1510915933:958..1046 | TCONS_00041826-exon-sc0003038-1510915933:958..1046 | Clytia hemisphaerica | exon |
| TCONS_00041826-exon-sc0003038-1510915933:8..468 | TCONS_00041826-exon-sc0003038-1510915933:8..468 | Clytia hemisphaerica | exon |
| TCONS_00041826-exon-sc0003038-1491911889:958..1046 | TCONS_00041826-exon-sc0003038-1491911889:958..1046 | Clytia hemisphaerica | exon |
| TCONS_00041826-exon-sc0003038-1491911889:8..468 | TCONS_00041826-exon-sc0003038-1491911889:8..468 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003038 | supercontig | sc0003038:8..1046 - |
Blast
The following BLAST results are available for this feature:
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