TCONS_00041819 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041819
Unique NameTCONS_00041819
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1920

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041819 ID=TCONS_00041819|Name=TCONS_00041819|organism=Clytia hemisphaerica|type=transcript|length=1920bp
GTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCTA
TACATTACATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAAT
GGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTCT
CAATACTCAATTACATACTCCGACCGTGATACAACAAAAAGCAGTTTGAC
TATTCGTTCTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGGA
AAGCTAATCTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTTT
TTGCAATTGGAATATATTGATGGGAAAGATAAATTTGACGTCCTGGCTGG
CGAGGATTTAACACTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAA
GCTGGTCTGTTAATGGACAAAGTTTGATAGAACCTTTAATTGACGCATCT
CCTCATTATAACTTGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAAT
TTTGGAGATTCTCAACCCTCGACGGAGACATAGTGGAAGGTACAAGCTTA
AATGGTCAACTCATTCTCATCAATGCCCGATTGTCAATATTTATTTCAAC
GTTACTGTTAGAGAACGTGACACAACAAGTACAACATCACCCACTACCAT
CACTACGACCAGTGCGATAACAACAACACCGCCATCTTTACCGAGCACTG
ATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTTCACAAGACGAAAAT
GATGACTCTATAGGCTTCGTTATGTTGATTGTCGGAACTTTCTTAATTGG
TCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTATAAAAGAGAGTTAG
CTCGCAAGACTAGGAGgaGTTTATCTATTTCATCGTTACATAAAGACAAG
AATTATAGATCGGAATCAATGAATCGAGATGAATCGGACACATCTGAGGA
GGATTCAGACGATTCAGACAGCAAACCTTTACTTCATAATGGCAATGTTA
CACCAAATAGCATCCAGCCCCTACCACAGTATAGATACGGTGAAGGTACT
CACAATGGATATGACGAAGATAATGGGTGTTTGTCTGACAATAACTTTGA
CCCACGACTCCAAAATGAATTTGAGCCACAACTTCGGAATAACATTAACC
GTCAACCGCAGAATAATAGTAACCATGTACCACAGAATAACGTCCCTCCT
GTACcacgaaggcttcaaaaaccaatAGTTGTacccaaaaataatttgca
aaataaatttgaaccacaaCGTCGGAATAACTTTGACCCTTGAGCACAGA
ATAATAGTAACCATGCACCACAGATTAACACCCCTCCTGTACcgccaagg
cttcaaaaacaaATGGCTGTACCCAATGATAGACAACGTGTTGAATATAA
TCCGACTTGAACTTATAATCCGActagaaatttttcaattttattagcaa
ttttagttaaaaacaatttaaataatgggccattccattttatcctCATA
CAGGccggtggacgaacatttccagggggtaacctGAGAACAATTTCCAG
GGGGGTctaaaagagtgtttttttcattttccagggggtaaaaagttatt
ctaaaatttccagggggttaaagaaaggttttagttcgtccatcgtcact
ttgaagtaaaaaaataaatttttccaagggtttctTTGcagattttgcca
ttttccacgGGGTGTCCTCgcatttcaaagaattttattttgacttgaaa
aggttcgtccacccccctgtatggatttttAATGGAATATCTCAATGAAA
ATCATGTTGTACTTATTGTATTTGAATCGGTTATTCGTCATGAATATCGA
ATTTTGTCAATATCATCGAATTTGAGAGAAtttatttcctttaaaaaatt
aattttgattctAGATGGCA
Run BLAST on NCBI

protein sequence of TCONS_00041819-protein

>TCONS_00041819-protein ID=TCONS_00041819-protein|Name=TCONS_00041819-protein|organism=Clytia hemisphaerica|type=polypeptide|length=430bp
VCEPKKEAMVMCHGRSYTLHGKAKNGASAKQYEWYKKSKKDSLVRLDSDS
QYSITYSDRDTTKSSLTIRSFSMVKHEGFYAFRKANLNYIDCYDYKVTAF
LQLEYIDGKDKFDVLAGEDLTLAVKAKDPASETSWSVNGQSLIEPLIDAS
PHYNLPFPSLSDSDTQILEILNPRRRHSGRYKLKWSTHSHQCPIVNIYFN
VTVRERDTTSTTSPTTITTTSAITTTPPSLPSTDQPVLKVGQKYVSQDEN
DDSIGFVMLIVGTFLIGLAIGSCVLWYFYKRELARKTRRSLSISSLHKDK
NYRSESMNRDESDTSEEDSDDSDSKPLLHNGNVTPNSIQPLPQYRYGEGT
HNGYDEDNGCLSDNNFDPRLQNEFEPQLRNNINRQPQNNSNHVPQNNVPP
VPRRLQKPIVVPKNNLQNKFEPQRRNNFDP
Run BLAST on NCBI

transcript from alignment at sc0003036:4966..10136-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041819 ID=TCONS_00041819|Name=TCONS_00041819|organism=Clytia hemisphaerica|type=transcript|length=5171bp|location=Sequence derived from alignment at sc0003036:4966..10136- (Clytia hemisphaerica)
GTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCTA
TACATTACATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAAT
GGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTCT
CAATACTCAATTACATACTCCGACCGTGATACAACAAAAAGCAGTTTGAC
TATTCGTTCTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGGA
AAGCTAATCTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTTT
TGTAAGTTAAATTGCTCTTTGCCCCCCGGGGGAGGCTACCTACCTACCTA
CCTACCTACCTGGACAAAAAGTGAAACATTTCAGTCCCACACAGGATCAC
TTTTTCGCAAATTTTAGCAAAGATAGACTCCATTTTTGAGCATCAGTGGA
ACATCCCCGTCAGTTGGGTAAACGACACGTCAATTACCATATCATTGAAA
ATCACGAAACAGTTAAAAGATTTAAGATATCGCTGAAGTAAAAAATCTTG
TGGTAAAAGGTCTCGTGAAGTTGATGGATCGTCACTTGAAAAATTTTTTT
TAATTTTATCAAAGTATGTCACTTTTTTGAATTTATAGTGCAATTGGAAT
ATATTGATGGGAAAGATAAATTTGACGTCCTGGCTGGCGAGGATTTAACA
CTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAAGCTGGTCTGTTAA
TGGACAAAGTTTGATAGAACCTTTAATTGACGCATCTCCTCATTATAACT
TGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAAGTAAGTAAAATCAT
GAACATATAAACGACTGGACATCCATCTCCTTTGTCTTTTTGTAGAAAAG
GCTGCTAGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGACAATAAAAGATAGATGTCCAGTCGTTTATATGTTCAT
GGTAAAATGTAAATCATTTTTCTTTGTACAGTAATAAGTAAAATATTTTG
TCGTGAAATAGTTTGCTTATGAGAGTAGAAAACCTCTCTTGAAAGAATAA
TCTTACACATCTTAAAGTCCATGGAAATATCCCTAGAAATTCTCAAATTA
CTAGGAAACGTCAAAGTCATTTTGCAAGACACTGTTGTTGCGATGAGAAC
GAAATTGATTGATTTATTCATTTTTTTTACCTTTTTTGGTGGCCCCTAAA
CACAAATCATCGGGGCAAAAAGTTCAGATGCCTCTAGGGATACTGACAGC
AGACAATACATTTTTTCGACTGGGACGGTAATTTTCTCATCGACTATTTT
TTGATATTTGAATCATACCAGGAGGGGGAGTACTCAAGGTACGATTCTTA
AGGGTAATTTTTTTCAGGTTTCCCAAAGTGCACTGAAAGGATGTGTAACG
TGAGAAAAACGAAGTTTTTTTGGCAAAATGAGGGTCGATTTTCGCTCAAA
CTAACTCAATTTTGAATAACTTTCTATGCATTCTAAGGGTTCAATTTTGC
TCCCCTAATTTATGTCTACACATACGGTAGCTTTTAGATCGCGTCCCCCT
CCGGTGGCCCAAACAAGTGATTAGAAGCTCTATCACAGCTTAGCTTTTTT
GGTGTTGATGTTTCTGTTTCTTAATGTAACGATATATTCTAACATGGTCA
TTCGAATAAACCTGGGGAACCTGGGGACATGTTTTCAAATTCTTTGCTAC
TTATTCTAGTTTTGGAGATTCTCAACCCTCGACGGAGACATAGTGGAAGG
TACAAGCTTAAATGGTCAACTCATTCTCATCAATGCCCGATTGTCAATAT
TTATTTCAACGTTACTGTTAGAGGTACGAGACTTTTTTTTGATTTTCATG
TGAAGTATATATGCTGTCTTCCTTCTTTCCTAAAAAAGGATTATAGAATT
CTATTCCAAATTCTACATGACGAGGTTTATTTATTTTCTTAAAAAAAGTA
GCTATGCTTCAACTTGAAGAGAGTACAATACGCTTTTAAAACAGTATTCA
GTACATATTTGTATGCACTCCTGGGGGGGGGGGATACTTAGGCAAATGGA
GGGTACGGTATGTGCCGCCCTTAAGGGTACCTTTTTTGGACTTCCAAAGT
TCCGCTAAGGGTCGAAAAAATCCTAGATGCTAATTCGCACCTTAACAGCT
GTTGATGCAGGTACCACTTCCATAAATGTAGAAATGGAAGAAATTCAAGT
AAATTTCAAACCTACAACCCTATATCTATACTACCAAAAAAGAAGAAAAT
ATAAGAAGAAGCCTTATTCATACAAACTTTTATCGTTTTTTTTGAAGAGA
TGGTCACCCTTTCCACAATACATTATCGGGAAAAAGTAAATTAACGAAAA
TGTAATCTGTTCTCCAATTGCATAGAACGTGACACAACAAGTACAACATC
ACCCACTACCATCACTACGACCAGTGCGATAACAACAACACCGCCATCTT
TACCGAGCACTGATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTTCA
CAAGACGAAAATGATGACTCTATAGGCTTCGTTATGTTGATTGTCGGAAC
TTTCTTAATTGGTCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTATA
AAAGAGAGTTAGCTCGCAAGACTAGGAGGTGAGTTCGATTAGCTCATTAG
ACTAAACTTATATTTGTTCCTTAAACTTGTTTTGTCATTAAAATTTTGGT
CCAATGGGTATCTGGCATAGATTTATAAAGCCCAAATGGCTATATGTCGT
GTTTAAGCTCTTCCAAGCAAAAAAACTAAATATCGCAAAAAATATTGCTG
TTATTGTTTTCGAAAACCCGCGAAGCTTCTTATTGGTCAAACGCTGAAAT
TCTATTGTAATGTGACGTGACCTAGGCAGGATTTCCTATCTAACCTTGGC
ACATTTTTTAGCCAAAGCACGGCTATAAATCTATGATATCTGGTCCTTTG
CAAACTGGTCTGTACCGGTACACAACTACCCCCTGTCATATCTTTTGAGC
CTGTAGGATCTCAAGAACTAAGGAAGCCTTTGACTTTTATCATCAGTGAT
AAATATTGACCATTTTATATAGTGTGAAAAATTTCAATTTGGTCTCGTGT
GTGGTTGATATTTTACAGATAGTCTGGCATTTTACAAATTGGTGCACAAA
AATTTCAAACCCCTCCCCCTCAGATGGACGTAGGATTAAGGTCAACCTTA
AATTTAGCTTGGTGCCTGTACACTTTCGATAGAATTCAAAATATTTTATT
TAAAATTTCAATTTCAGGAGTTTATCTATTTCATCGTTACATAAAGACAA
GAATTATAGATCGGAATCAATGAATCGAGATGAATCGGACACATCTGAGG
AGGATTCAGACGATTCAGACAGCAAACCTTTACTTCATAATGGCAATGTT
ACACCAAATAGCATCCAGCCCCTACCACAGTATAGATACGGTGAAGGTAC
TCACAATGGATATGACGAAGATAATGGGTGTTTGTCTGACAATAACTTTG
ACCCACGACTCCAAAATGAATTTGAGCCACAACTTCGGAATAACATTAAC
CGTCAACCGCAGAATAATAGTAACCATGTACCACAGAATAACGTCCCTCC
TGTACCACGAAGGCTTCAAAAACCAATAGTTGTACCCAAAAATAATTTGC
AAAATAAATTTGAACCACAACGTCGGAATAACTTTGACCCTTGAGCACAG
AATAATAGTAACCATGCACCACAGATTAACACCCCTCCTGTACCGCCAAG
GCTTCAAAAACAAATGGCTGTACCCAATGATAGACAACGTGTTGAATATA
ATCCGACTTGAACTTATAATCCGACTAGAAATTTTTCAATTTTATTAGCA
ATTTTAGTTAAAAACAATTTAAATAATGGGCCATTCCATTTTATCCTCAT
ACAGGCCGGTGGACGAACATTTCCAGGGGGTAACCTGAGAACAATTTCCA
GGGGGGTCTAAAAGAGTGTTTTTTTCATTTTCCAGGGGGTAAAAAGTTAT
TCTAAAATTTCCAGGGGGTTAAAGAAAGGTTTTAGTTCGTCCATCGTCAC
TTTGAAGTAAAAAAATAAATTTTTCCAAGGGTTTCTTTGCAGATTTTGCC
ATTTTCCACGGGGTGTCCTCGCATTTCAAAGAATTTTATTTTGACTTGAA
AAGGTTCGTCCACCCCCCTGTATGGATTTTTAATGGAATATCTCAATGAA
AATCATGTTGTACTTATTGTATTTGAATCGGTTATTCGTCATGAATATCG
AATTTTGTCAATATCATCGAATTTGAGAGAATTTATTTCCTTTAAAAAAT
TAATTTTGATTCTAGATGGCA

Coding sequence (CDS) from alignment at sc0003036:4966..10136-

>TCONS_00041819 ID=TCONS_00041819|Name=TCONS_00041819|organism=Clytia hemisphaerica|type=CDS|length=6465bp|location=Sequence derived from alignment at sc0003036:4966..10136- (Clytia hemisphaerica)
GAGTTTATCTATTTCATCGTTACATAAAGACAAGAATTATAGATCGGAAT
CAATGAATCGAGATGAATCGGACACATCTGAGGAGGATTCAGACGATTCA
GACAGCAAACCTTTACTTCATAATGGCAATGTTACACCAAATAGCATCCA
GCCCCTACCACAGTATAGATACGGTGAAGGTACTCACAATGGATATGACG
AAGATAATGGGTGTTTGTCTGACAATAACTTTGACCCACGACTCCAAAAT
GAATTTGAGCCACAACTTCGGAATAACATTAACCGTCAACCGCAGAATAA
TAGTAACCATGTACCACAGAATAACGTCCCTCCTGTACCACGAAGGCTTC
AAAAACCAATAGTTGTACCCAAAAATAATTTGCAAAATAAATTTGAACCA
CAACGTCGGAATAACTTTGACCCTTGAAACGTGACACAACAAGTACAACA
TCACCCACTACCATCACTACGACCAGTGCGATAACAACAACACCGCCATC
TTTACCGAGCACTGATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTT
CACAAGACGAAAATGATGACTCTATAGGCTTCGTTATGTTGATTGTCGGA
ACTTTCTTAATTGGTCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTA
TAAAAGAGAGTTAGCTCGCAAGACTAGGAGTTTTGGAGATTCTCAACCCT
CGACGGAGACATAGTGGAAGGTACAAGCTTAAATGGTCAACTCATTCTCA
TCAATGCCCGATTGTCAATATTTATTTCAACGTTACTGTTAGAGTGCAAT
TGGAATATATTGATGGGAAAGATAAATTTGACGTCCTGGCTGGCGAGGAT
TTAACACTTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAAGCTGGTC
TGTTAATGGACAAAGTTTGATAGAACCTTTAATTGACGCATCTCCTCATT
ATAACTTGCCTTTCCCTAGTCTATCTGACTCTGATACGCAAAGTTTGTGA
ACCTAAAAAAGAAGCAATGGTTATGTGTCATGGACGGTCCTATACATTAC
ATGGGAAAGCAAAGAATGGTGCCAGCGCTAAACAATATGAATGGTACAAA
AAGAGCAAAAAGGATTCGCTAGTACGATTGGATAGCGATTCTCAATACTC
AATTACATACTCCGACCGTGATACAACAAAAAGCAGTTTGACTATTCGTT
CTTTCAGTATGGTTAAACACGAAGGATTTTACGCTTTCAGGAAAGCTAAT
CTGAACTACATCGATTGTTATGATTACAAAGTGACAGCTTTTTGAGTTTA
TCTATTTCATCGTTACATAAAGACAAGAATTATAGATCGGAATCAATGAA
TCGAGATGAATCGGACACATCTGAGGAGGATTCAGACGATTCAGACAGCA
AACCTTTACTTCATAATGGCAATGTTACACCAAATAGCATCCAGCCCCTA
CCACAGTATAGATACGGTGAAGGTACTCACAATGGATATGACGAAGATAA
TGGGTGTTTGTCTGACAATAACTTTGACCCACGACTCCAAAATGAATTTG
AGCCACAACTTCGGAATAACATTAACCGTCAACCGCAGAATAATAGTAAC
CATGTACCACAGAATAACGTCCCTCCTGTACCACGAAGGCTTCAAAAACC
AATAGTTGTACCCAAAAATAATTTGCAAAATAAATTTGAACCACAACGTC
GGAATAACTTTGACCCTTGAAACGTGACACAACAAGTACAACATCACCCA
CTACCATCACTACGACCAGTGCGATAACAACAACACCGCCATCTTTACCG
AGCACTGATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTTCACAAGA
CGAAAATGATGACTCTATAGGCTTCGTTATGTTGATTGTCGGAACTTTCT
TAATTGGTCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTATAAAAGA
GAGTTAGCTCGCAAGACTAGGAGTTTTGGAGATTCTCAACCCTCGACGGA
GACATAGTGGAAGGTACAAGCTTAAATGGTCAACTCATTCTCATCAATGC
CCGATTGTCAATATTTATTTCAACGTTACTGTTAGAGTGCAATTGGAATA
TATTGATGGGAAAGATAAATTTGACGTCCTGGCTGGCGAGGATTTAACAC
TTGCAGTGAAAGCAAAAGACCCTGCATCTGAAACAAGCTGGTCTGTTAAT
GGACAAAGTTTGATAGAACCTTTAATTGACGCATCTCCTCATTATAACTT
GCCTTTCCCTAGTCTATCTGACTCTGATACGCAAAGTTTGTGAACCTAAA
AAAGAAGCAATGGTTATGTGTCATGGACGGTCCTATACATTACATGGGAA
AGCAAAGAATGGTGCCAGCGCTAAACAATATGAATGGTACAAAAAGAGCA
AAAAGGATTCGCTAGTACGATTGGATAGCGATTCTCAATACTCAATTACA
TACTCCGACCGTGATACAACAAAAAGCAGTTTGACTATTCGTTCTTTCAG
TATGGTTAAACACGAAGGATTTTACGCTTTCAGGAAAGCTAATCTGAACT
ACATCGATTGTTATGATTACAAAGTGACAGCTTTTTGAGTTTATCTATTT
CATCGTTACATAAAGACAAGAATTATAGATCGGAATCAATGAATCGAGAT
GAATCGGACACATCTGAGGAGGATTCAGACGATTCAGACAGCAAACCTTT
ACTTCATAATGGCAATGTTACACCAAATAGCATCCAGCCCCTACCACAGT
ATAGATACGGTGAAGGTACTCACAATGGATATGACGAAGATAATGGGTGT
TTGTCTGACAATAACTTTGACCCACGACTCCAAAATGAATTTGAGCCACA
ACTTCGGAATAACATTAACCGTCAACCGCAGAATAATAGTAACCATGTAC
CACAGAATAACGTCCCTCCTGTACCACGAAGGCTTCAAAAACCAATAGTT
GTACCCAAAAATAATTTGCAAAATAAATTTGAACCACAACGTCGGAATAA
CTTTGACCCTTGAAACGTGACACAACAAGTACAACATCACCCACTACCAT
CACTACGACCAGTGCGATAACAACAACACCGCCATCTTTACCGAGCACTG
ATCAACCAGTACTCAAAGTGGGTCAGAAATACGTTTCACAAGACGAAAAT
GATGACTCTATAGGCTTCGTTATGTTGATTGTCGGAACTTTCTTAATTGG
TCTTGCGATCGGATCTTGTGTGCTTTGGTACTTTTATAAAAGAGAGTTAG
CTCGCAAGACTAGGAGTTTTGGAGATTCTCAACCCTCGACGGAGACATAG
TGGAAGGTACAAGCTTAAATGGTCAACTCATTCTCATCAATGCCCGATTG
TCAATATTTATTTCAACGTTACTGTTAGAGTGCAATTGGAATATATTGAT
GGGAAAGATAAATTTGACGTCCTGGCTGGCGAGGATTTAACACTTGCAGT
GAAAGCAAAAGACCCTGCATCTGAAACAAGCTGGTCTGTTAATGGACAAA
GTTTGATAGAACCTTTAATTGACGCATCTCCTCATTATAACTTGCCTTTC
CCTAGTCTATCTGACTCTGATACGCAAAGTTTGTGAACCTAAAAAAGAAG
CAATGGTTATGTGTCATGGACGGTCCTATACATTACATGGGAAAGCAAAG
AATGGTGCCAGCGCTAAACAATATGAATGGTACAAAAAGAGCAAAAAGGA
TTCGCTAGTACGATTGGATAGCGATTCTCAATACTCAATTACATACTCCG
ACCGTGATACAACAAAAAGCAGTTTGACTATTCGTTCTTTCAGTATGGTT
AAACACGAAGGATTTTACGCTTTCAGGAAAGCTAATCTGAACTACATCGA
TTGTTATGATTACAAAGTGACAGCTTTTTGAGTTTATCTATTTCATCGTT
ACATAAAGACAAGAATTATAGATCGGAATCAATGAATCGAGATGAATCGG
ACACATCTGAGGAGGATTCAGACGATTCAGACAGCAAACCTTTACTTCAT
AATGGCAATGTTACACCAAATAGCATCCAGCCCCTACCACAGTATAGATA
CGGTGAAGGTACTCACAATGGATATGACGAAGATAATGGGTGTTTGTCTG
ACAATAACTTTGACCCACGACTCCAAAATGAATTTGAGCCACAACTTCGG
AATAACATTAACCGTCAACCGCAGAATAATAGTAACCATGTACCACAGAA
TAACGTCCCTCCTGTACCACGAAGGCTTCAAAAACCAATAGTTGTACCCA
AAAATAATTTGCAAAATAAATTTGAACCACAACGTCGGAATAACTTTGAC
CCTTGAAACGTGACACAACAAGTACAACATCACCCACTACCATCACTACG
ACCAGTGCGATAACAACAACACCGCCATCTTTACCGAGCACTGATCAACC
AGTACTCAAAGTGGGTCAGAAATACGTTTCACAAGACGAAAATGATGACT
CTATAGGCTTCGTTATGTTGATTGTCGGAACTTTCTTAATTGGTCTTGCG
ATCGGATCTTGTGTGCTTTGGTACTTTTATAAAAGAGAGTTAGCTCGCAA
GACTAGGAGTTTTGGAGATTCTCAACCCTCGACGGAGACATAGTGGAAGG
TACAAGCTTAAATGGTCAACTCATTCTCATCAATGCCCGATTGTCAATAT
TTATTTCAACGTTACTGTTAGAGTGCAATTGGAATATATTGATGGGAAAG
ATAAATTTGACGTCCTGGCTGGCGAGGATTTAACACTTGCAGTGAAAGCA
AAAGACCCTGCATCTGAAACAAGCTGGTCTGTTAATGGACAAAGTTTGAT
AGAACCTTTAATTGACGCATCTCCTCATTATAACTTGCCTTTCCCTAGTC
TATCTGACTCTGATACGCAAAGTTTGTGAACCTAAAAAAGAAGCAATGGT
TATGTGTCATGGACGGTCCTATACATTACATGGGAAAGCAAAGAATGGTG
CCAGCGCTAAACAATATGAATGGTACAAAAAGAGCAAAAAGGATTCGCTA
GTACGATTGGATAGCGATTCTCAATACTCAATTACATACTCCGACCGTGA
TACAACAAAAAGCAGTTTGACTATTCGTTCTTTCAGTATGGTTAAACACG
AAGGATTTTACGCTTTCAGGAAAGCTAATCTGAACTACATCGATTGTTAT
GATTACAAAGTGACAGCTTTTTGAGTTTATCTATTTCATCGTTACATAAA
GACAAGAATTATAGATCGGAATCAATGAATCGAGATGAATCGGACACATC
TGAGGAGGATTCAGACGATTCAGACAGCAAACCTTTACTTCATAATGGCA
ATGTTACACCAAATAGCATCCAGCCCCTACCACAGTATAGATACGGTGAA
GGTACTCACAATGGATATGACGAAGATAATGGGTGTTTGTCTGACAATAA
CTTTGACCCACGACTCCAAAATGAATTTGAGCCACAACTTCGGAATAACA
TTAACCGTCAACCGCAGAATAATAGTAACCATGTACCACAGAATAACGTC
CCTCCTGTACCACGAAGGCTTCAAAAACCAATAGTTGTACCCAAAAATAA
TTTGCAAAATAAATTTGAACCACAACGTCGGAATAACTTTGACCCTTGAA
ACGTGACACAACAAGTACAACATCACCCACTACCATCACTACGACCAGTG
CGATAACAACAACACCGCCATCTTTACCGAGCACTGATCAACCAGTACTC
AAAGTGGGTCAGAAATACGTTTCACAAGACGAAAATGATGACTCTATAGG
CTTCGTTATGTTGATTGTCGGAACTTTCTTAATTGGTCTTGCGATCGGAT
CTTGTGTGCTTTGGTACTTTTATAAAAGAGAGTTAGCTCGCAAGACTAGG
AGTTTTGGAGATTCTCAACCCTCGACGGAGACATAGTGGAAGGTACAAGC
TTAAATGGTCAACTCATTCTCATCAATGCCCGATTGTCAATATTTATTTC
AACGTTACTGTTAGAGTGCAATTGGAATATATTGATGGGAAAGATAAATT
TGACGTCCTGGCTGGCGAGGATTTAACACTTGCAGTGAAAGCAAAAGACC
CTGCATCTGAAACAAGCTGGTCTGTTAATGGACAAAGTTTGATAGAACCT
TTAATTGACGCATCTCCTCATTATAACTTGCCTTTCCCTAGTCTATCTGA
CTCTGATACGCAAAGTTTGTGAACCTAAAAAAGAAGCAATGGTTATGTGT
CATGGACGGTCCTATACATTACATGGGAAAGCAAAGAATGGTGCCAGCGC
TAAACAATATGAATGGTACAAAAAGAGCAAAAAGGATTCGCTAGTACGAT
TGGATAGCGATTCTCAATACTCAATTACATACTCCGACCGTGATACAACA
AAAAGCAGTTTGACTATTCGTTCTTTCAGTATGGTTAAACACGAAGGATT
TTACGCTTTCAGGAAAGCTAATCTGAACTACATCGATTGTTATGATTACA
AAGTGACAGCTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025725XLOC_025725Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041819-proteinTCONS_00041819-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041819-exon-sc0003036-1575043694:9836..10136TCONS_00041819-exon-sc0003036-1575043694:9836..10136Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1575043694:9301..9498TCONS_00041819-exon-sc0003036-1575043694:9301..9498Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1575043694:7464..7577TCONS_00041819-exon-sc0003036-1575043694:7464..7577Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1575043694:6659..6911TCONS_00041819-exon-sc0003036-1575043694:6659..6911Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1575043694:4966..6019TCONS_00041819-exon-sc0003036-1575043694:4966..6019Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1510915933:9836..10136TCONS_00041819-exon-sc0003036-1510915933:9836..10136Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1510915933:9301..9498TCONS_00041819-exon-sc0003036-1510915933:9301..9498Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1510915933:7464..7577TCONS_00041819-exon-sc0003036-1510915933:7464..7577Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1510915933:6659..6911TCONS_00041819-exon-sc0003036-1510915933:6659..6911Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1510915933:4966..6019TCONS_00041819-exon-sc0003036-1510915933:4966..6019Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1491911889:9836..10136TCONS_00041819-exon-sc0003036-1491911889:9836..10136Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1491911889:9301..9498TCONS_00041819-exon-sc0003036-1491911889:9301..9498Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1491911889:7464..7577TCONS_00041819-exon-sc0003036-1491911889:7464..7577Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1491911889:6659..6911TCONS_00041819-exon-sc0003036-1491911889:6659..6911Clytia hemisphaericaexon
TCONS_00041819-exon-sc0003036-1491911889:4966..6019TCONS_00041819-exon-sc0003036-1491911889:4966..6019Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003036supercontigsc0003036:4966..10136 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.5892	14.8259	5.63368	3.52522	7.20335	5.83377	11.174	11.5599	7.29099	7.1616	10.4087	7.73208	9.18258	7.99903	9.96651	11.1995	7.60214	10.0139	6.94477	6.17949	8.46952	8.12153	14.2549	11.9856	35.9739	30.8437	3.94667	3.25165	12.8281	12.7541
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR007110Ig-like_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041819 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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