TCONS_00041816 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041816
Unique NameTCONS_00041816
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length175

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041816 ID=TCONS_00041816|Name=TCONS_00041816|organism=Clytia hemisphaerica|type=transcript|length=175bp
NttgaaaattgaaattttttgatagttttatgttttattaaTAGAAAACA
GGGATTCAGATTTCCAATTTATGATACAATAGGGATGGGTGGAGGGTGGG
AGTCAAGGGACTCCTTTTAACGcagtaggcttttaaatggCACAAGTTTG
GGTATCTTCAAGAGTTTCAAGCTAG
Run BLAST on NCBI

transcript from alignment at sc0003033:6749..6923

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041816 ID=TCONS_00041816|Name=TCONS_00041816|organism=Clytia hemisphaerica|type=transcript|length=175bp|location=Sequence derived from alignment at sc0003033:6749..6923 (Clytia hemisphaerica)
CTAGCTTGAAACTCTTGAAGATACCCAAACTTGTGccatttaaaagccta
ctgCGTTAAAAGGAGTCCCTTGACTCCCACCCTCCACCCATCCCTATTGT
ATCATAAATTGGAAATCTGAATCCCTGTTTTCTAttaataaaacataaaa
ctatcaaaaaatttcaattttcaaN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025722XLOC_025722Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041816-exon-sc0003033-1491911889:6749..6923TCONS_00041816-exon-sc0003033-1491911889:6749..6923Clytia hemisphaericaexon
TCONS_00041816-exon-sc0003033-1510915933:6749..6923TCONS_00041816-exon-sc0003033-1510915933:6749..6923Clytia hemisphaericaexon
TCONS_00041816-exon-sc0003033-1575043694:6749..6923TCONS_00041816-exon-sc0003033-1575043694:6749..6923Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003033supercontigsc0003033:6749..6923 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041816 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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