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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041805 ID=TCONS_00041805|Name=TCONS_00041805|organism=Clytia hemisphaerica|type=transcript|length=1013bp
TAACGGTGCAACGATATTGctaaaaatatattataaatgGAAACTTGATG
TTGAACTTGTTTTTCAAGGCATTTTAGAAAGCTGAAATTAAACTACATAA
TAACTTACGACTGNAACGGTGCAACGATATTGccaaaaatatattataaa
tgGAAACTTGATGTTGAACTTGTTTTTCAAGGCATTTTAGAAAGCTGAAA
TTAAACTACATAATAACTTACGACTGGATGGATTCGATGTACATTTGACA
ACGTTATTATTGCATAATATTACCTGATCAGACACTTATAATATTTATTA
TATGTCTGTTAGATAAGAAACCATCAAGTCATCCATGGGAAATTTTTCAA
GCAAGATGAACGAACGAAgatcgaaatgaaaattttatttattggtcagc
ctaagctgagcattcaaataggtaaaattttcttccatcatcagcatcat
aagacggcaaaaaaaaaatccgattttccgatctcNgctatctagctaag
ctctattggctgaccttccagcctcggctggtttattgcATTTGATTTAG
AGACTCGGAATTACATGCAGTACATTTTTATGTGAAAGTTGGCTGATCGA
CATTAACAATGATAATTTCTATACACTACATTAGACTATGGACTTGGTGT
TACCTGATGTGAAAATGAGTTGAATGAGTGGAATGCACTTTTTCGTTTTG
TGTTTACCCAGAGGTAACAAATGAGACTAATTATTGTATTGTAAAAACAC
ATTGTTGTGGTAAAGTCATTTTGCTTCATCTAGCTAGGaaatttaaagct
ttttaagaaaaaatctttatattacatttttaagccttttttgtttttca
tactTTAAAAAGCTATAGTGTTATTTGCAAAAATATCTTGGggtattttc
ttttatttctcgccaaaatttattttttcctccatcagccaaattaaatt
accgccaaatttattttatttaacgcATTCCCCAAATtggtgctatttca
ggccttaaaaaat Run BLAST on NCBI transcript from alignment at sc0003028:9061..10073 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041805 ID=TCONS_00041805|Name=TCONS_00041805|organism=Clytia hemisphaerica|type=transcript|length=1013bp|location=Sequence derived from alignment at sc0003028:9061..10073 (Clytia hemisphaerica)
attttttaaggcctgaaatagcaccaATTTGGGGAATgcgttaaataaaa
taaatttggcggtaatttaatttggctgatggaggaaaaaataaattttg
gcgagaaataaaagaaaataccCCAAGATATTTTTGCAAATAACACTATA
GCTTTTTAAagtatgaaaaacaaaaaaggcttaaaaatgtaatataaaga
ttttttcttaaaaagctttaaatttCCTAGCTAGATGAAGCAAAATGACT
TTACCACAACAATGTGTTTTTACAATACAATAATTAGTCTCATTTGTTAC
CTCTGGGTAAACACAAAACGAAAAAGTGCATTCCACTCATTCAACTCATT
TTCACATCAGGTAACACCAAGTCCATAGTCTAATGTAGTGTATAGAAATT
ATCATTGTTAATGTCGATCAGCCAACTTTCACATAAAAATGTACTGCATG
TAATTCCGAGTCTCTAAATCAAATgcaataaaccagccgaggctggaagg
tcagccaatagagcttagctagatagcNgagatcggaaaatcggattttt
tttttgccgtcttatgatgctgatgatggaagaaaattttacctatttga
atgctcagcttaggctgaccaataaataaaattttcatttcgatcTTCGT
TCGTTCATCTTGCTTGAAAAATTTCCCATGGATGACTTGATGGTTTCTTA
TCTAACAGACATATAATAAATATTATAAGTGTCTGATCAGGTAATATTAT
GCAATAATAACGTTGTCAAATGTACATCGAATCCATCCAGTCGTAAGTTA
TTATGTAGTTTAATTTCAGCTTTCTAAAATGCCTTGAAAAACAAGTTCAA
CATCAAGTTTCcatttataatatatttttggCAATATCGTTGCACCGTTN
CAGTCGTAAGTTATTATGTAGTTTAATTTCAGCTTTCTAAAATGCCTTGA
AAAACAAGTTCAACATCAAGTTTCcatttataatatatttttagCAATAT
CGTTGCACCGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041805-exon-sc0003028-1491911889:9061..10073 | TCONS_00041805-exon-sc0003028-1491911889:9061..10073 | Clytia hemisphaerica | exon |
| TCONS_00041805-exon-sc0003028-1510915933:9061..10073 | TCONS_00041805-exon-sc0003028-1510915933:9061..10073 | Clytia hemisphaerica | exon |
| TCONS_00041805-exon-sc0003028-1575043694:9061..10073 | TCONS_00041805-exon-sc0003028-1575043694:9061..10073 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003028 | supercontig | sc0003028:9061..10073 . |
Blast
The following BLAST results are available for this feature:
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