TCONS_00041797 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041797
Unique NameTCONS_00041797
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041797 ID=TCONS_00041797|Name=TCONS_00041797|organism=Clytia hemisphaerica|type=transcript|length=187bp
CACGGGACTGTGACGTGGGCGATGAACGTGATGAAGACTTCAAACGCCAA
AAAAGGGCCACACAAGGCAATGAACGCTTACACAGAGTACACCGATAAAG
ACCTTGATGGTCAAATTGCAGCAATAACGATGAGTTATTTaaacatgaaa
aattttgaagATGACCCGATACcagatgaaataaaaa
Run BLAST on NCBI

transcript from alignment at sc0003025:8612..8932+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041797 ID=TCONS_00041797|Name=TCONS_00041797|organism=Clytia hemisphaerica|type=transcript|length=321bp|location=Sequence derived from alignment at sc0003025:8612..8932+ (Clytia hemisphaerica)
CACGGGACTGTGACGTGGGCGATGAACGTGATGAAGACTTCAAACGCCAA
AAAAGGGCCACACAAGGCAATGAACGCTTACACAGAGTACACCGATAAAG
ACCTTGATGGTCAAATTGCAGCAATAACGATGAGTTATTTaaacatgaaa
aattttgaaggtaTTATACTTTCTTTGTAAGAacttaaaagatttttatt
ttgccTTCTGAAATCGCTAACGGTTGATTTATCCTAAAgtgttatatata
aaaaaattatattgttcgaATAAAGATAACAATTTTCTTTCTAGATGACC
CGATACcagatgaaataaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025703XLOC_025703Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041797-exon-sc0003025-1491911889:8612..8771TCONS_00041797-exon-sc0003025-1491911889:8612..8771Clytia hemisphaericaexon
TCONS_00041797-exon-sc0003025-1510915933:8612..8771TCONS_00041797-exon-sc0003025-1510915933:8612..8771Clytia hemisphaericaexon
TCONS_00041797-exon-sc0003025-1575043694:8612..8771TCONS_00041797-exon-sc0003025-1575043694:8612..8771Clytia hemisphaericaexon
TCONS_00041797-exon-sc0003025-1491911889:8906..8932TCONS_00041797-exon-sc0003025-1491911889:8906..8932Clytia hemisphaericaexon
TCONS_00041797-exon-sc0003025-1510915933:8906..8932TCONS_00041797-exon-sc0003025-1510915933:8906..8932Clytia hemisphaericaexon
TCONS_00041797-exon-sc0003025-1575043694:8906..8932TCONS_00041797-exon-sc0003025-1575043694:8906..8932Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003025supercontigsc0003025:8612..8932 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041797 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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