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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041760 ID=TCONS_00041760|Name=TCONS_00041760|organism=Clytia hemisphaerica|type=transcript|length=700bp
GTAGGTTGTTATAAAACATAACGTTACGAATACCTCGAAATTCCTGTcat
aagttttgaaaactttctcTCAGATccgttaaaattatttttttcatttt
tacagtCGATGCCGTTATATTCGAATGGTTTATCATCGACGCCAGAGAAC
AGTGTCGGATTACTTGTGggtacgaacaaattttgaaattttacaaatat
taaATATTCAAGCGATGCTGGACGTCATATTATGTTGTGGTTGTTGGAAG
GAAAAGGCAGTTATTAGTTTAGAGAGGGTTCGTGGAATATGCACCATGTA
CCGTATGTAATGCATGCAATGCGTCTTTACCGCCGTACTTACGGATAATG
CATCCACGATACGACGTAAATATGACGTAAATCAATCGAACGGTTTACAG
GGCTATAAAGATtgacaaaagaaattctttaacTGTACACAAACAAGGAC
AATATTAGTACACATACAGTAATAATACTGCAACAACgtaaaagtcaaaa
tttgacgaaaataaaacgtattgaaaaagatttataatGGTATTTTAAGC
ATCTTACGAAGTTGggtccggggggggtactacccttgtcgaccgacggg
ggtgctccactgacgttcgaaaaatggaccctacgtgggactcgaaattt
gcgaaaaaagtgaccctgaatgggactgaaattccaaaattttctcaaat Run BLAST on NCBI transcript from alignment at sc0003008:1..1345- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041760 ID=TCONS_00041760|Name=TCONS_00041760|organism=Clytia hemisphaerica|type=transcript|length=1345bp|location=Sequence derived from alignment at sc0003008:1..1345- (Clytia hemisphaerica)
GTAGGTTGTTATAAAACATAACGTTACGAATACCTCGAAATTCCTGTCAT
AAGTTTTGAAAACTTTCTCTCAGATCCGTTAAAATTATTTTTTTCATTTT
TACAGTCGATGCCGTTATATTCGAATGGTTTATCATCGACGCCAGAGAAC
AGTGTCGGATTACTTGTGGTAAGTTTAAACTACCTTAAGGGTACTAACTT
GCGCGAACCACGTGTCATTAAAGAGAACAATTAAAATCACGTGTCCAAAA
CAAACTTGTAAAACAATTGAAACAATCAAAATCAGCCATATTTGTTTTAA
NATTAAAATCACGTGTCCAAAACAAACTTGTAAAACAATTGAAACAATCA
AAATCAGCCATATTTGTTTTAATATTTGGCATGTGACATTTGTTTTGATT
TTGTATCCCGCTGCATACAGTTTGTTTACAAATTTCGTCTGTACTTTTAT
ATCCCTTTAACTAAAAGAATATACACAAAGGAAATATTTAGACTTTAATC
AAATTGTTTTCGCGATATTCAATTGGGGTTTATGCGTCATTAGACCTTTT
TTTGCGAAAGTTAAACTTGCGAAACGTGTCTAAGGGTCTAATTTAAGGAT
AAATTTATATTCTCGAGAAGCAGAACATTCTTTGTAAATTTTCATTCTCT
ATTATTGTGAATCGGGGTGTGGAGTGACCAGTGGAGAAATTGAAGCACAA
TGAGAGTAGGTAGTAATCATAAATTTCATAACCTGGTGATTTTAGTTGCA
TAATTTCTTTTTTTTTCTACCGCATTCGGAATTTGATGAATTTTCAATAT
TTTCCTTTTTCAGGGTACGAACAAATTTTGAAATTTTACAAATATTAAAT
ATTCAAGCGATGCTGGACGTCATATTATGTTGTGGTTGTTGGAAGGAAAA
GGCAGTTATTAGTTTAGAGAGGGTTCGTGGAATATGCACCATGTACCGTA
TGTAATGCATGCAATGCGTCTTTACCGCCGTACTTACGGATAATGCATCC
ACGATACGACGTAAATATGACGTAAATCAATCGAACGGTTTACAGGGCTA
TAAAGATTGACAAAAGAAATTCTTTAACTGTACACAAACAAGGACAATAT
TAGTACACATACAGTAATAATACTGCAACAACGTAAAAGTCAAAATTTGA
CGAAAATAAAACGTATTGAAAAAGATTTATAATGGTATTTTAAGCATCTT
ACGAAGTTGGGTCCGGGGGGGGTACTACCCTTGTCGACCGACGGGGGTGC
TCCACTGACGTTCGAAAAATGGACCCTACGTGGGACTCGAAATTTGCGAA
AAAAGTGACCCTGAATGGGACTGAAATTCCAAAATTTTCTCAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041760-exon-sc0003008-1575043694:1178..1345 | TCONS_00041760-exon-sc0003008-1575043694:1178..1345 | Clytia hemisphaerica | exon |
| TCONS_00041760-exon-sc0003008-1575043694:1..532 | TCONS_00041760-exon-sc0003008-1575043694:1..532 | Clytia hemisphaerica | exon |
| TCONS_00041760-exon-sc0003008-1510915933:1178..1345 | TCONS_00041760-exon-sc0003008-1510915933:1178..1345 | Clytia hemisphaerica | exon |
| TCONS_00041760-exon-sc0003008-1510915933:1..532 | TCONS_00041760-exon-sc0003008-1510915933:1..532 | Clytia hemisphaerica | exon |
| TCONS_00041760-exon-sc0003008-1491911889:1178..1345 | TCONS_00041760-exon-sc0003008-1491911889:1178..1345 | Clytia hemisphaerica | exon |
| TCONS_00041760-exon-sc0003008-1491911889:1..532 | TCONS_00041760-exon-sc0003008-1491911889:1..532 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003008 | supercontig | sc0003008:1..1345 - |
Blast
The following BLAST results are available for this feature:
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