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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041755 ID=TCONS_00041755|Name=TCONS_00041755|organism=Clytia hemisphaerica|type=transcript|length=747bp
GTTCAGCTTATCTTGGAGTATTTTTATATGGACAAATTTGTCAACCGAAA
AACCGATTGGTATTTGTTTGTGAAGAGTGCAATGCAACTGGTCATGACTT
GCTGGACTATTTATTCAGCTATTCAAAATGCAAAACGTGCTCGTTTGGTG
AAGATTATGGACAAGGGTGGAAATGAAGATTCAGGTAATGTCGTTAATGA
TATCATCGAACAACGTAAACAGGATGGTTTGGAAATCGATTCTGAACTGC
TTGTAGATCAGGCATTACAACAAATGTGTAAAGAAAATATTCAGAAGCTT
GATGAACTGGAGAATCAACATCGAAAACGGGCCAATATGAAACCACTCGA
CCCTAACCAAGAGAAAGACGCATCAGTCAAGATGAAGTTTTTCTCCTATA
TGATGATCCCAATCGCCATGGCAACCATGTGTCGTGTCATTGGTTCCACT
TACCAATACGGTACCGGCAAAATTGACCGATCCTGTTTCACTGTTGAGGA
TGGAGGAAAGATATTCCAAAGTCCTTTTGATTCAGGCTGCATGAGAGGAA
TAGATTACCTTGTGGTGATTCTAACTTTCACGCCTTTGGCAACAATTCAA
ATTGTTTACGTTGTCATACATGTTTGGTTTCGGTTGAACCCTCGTTCTTC
TACACTGGAGAAGTATTTCTTCTGAAAACTAATTACCATGAACATCGATA
CAGTTGGATAGTGTGTTGGATGGActaattcacttttttgcttcgtT Run BLAST on NCBI protein sequence of TCONS_00041755-protein >TCONS_00041755-protein ID=TCONS_00041755-protein|Name=TCONS_00041755-protein|organism=Clytia hemisphaerica|type=polypeptide|length=224bp
VQLILEYFYMDKFVNRKTDWYLFVKSAMQLVMTCWTIYSAIQNAKRARLV
KIMDKGGNEDSGNVVNDIIEQRKQDGLEIDSELLVDQALQQMCKENIQKL
DELENQHRKRANMKPLDPNQEKDASVKMKFFSYMMIPIAMATMCRVIGST
YQYGTGKIDRSCFTVEDGGKIFQSPFDSGCMRGIDYLVVILTFTPLATIQ
IVYVVIHVWFRLNPRSSTLEKYFF Run BLAST on NCBI transcript from alignment at sc0003005:7092..14328+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041755 ID=TCONS_00041755|Name=TCONS_00041755|organism=Clytia hemisphaerica|type=transcript|length=7237bp|location=Sequence derived from alignment at sc0003005:7092..14328+ (Clytia hemisphaerica)
GTTCAGCTTATCTTGGAGTATTTTTATATGGACAAATTTGTCAACCGAAA
AACCGATTGGTATTTGTTTGTGAAGAGTGCAATGCAACTGGTCATGACTT
GCTGGACTATTTATTCAGCTATTCAAAATGCAAAACGTGCTCGTTTGGTG
AAGATTATGGACAAGGGTGGAAATGAAGATTCAGGTAATGTCGTTAATGA
TATCATCGAACAACGTAAACAGGATGGTTTGGAAATCGATTCTGAACTGC
TTGTAGATCAGGCATTACAACAAATGTGTAAAGAAAATATTCAGAAGCTT
GATGAACTGGAGAATCAACATCGAAAACGGGCCAATATGAAACCACTCGA
CCCTAACCAAGAGAAAGACGCATCAGTCAAGATGAAGTTTTTCTCCTATA
TGATGATCCCAATCGCCATGGCAACCATGTGTCGTGTCATTGGTTCCACT
TACCAATACGGTACCGGCAAAATTGACCGATCCTGTTTCACTGTTGAGGA
TGGAGGAAAGATATTCCAAAGTCCTTTTGATTCAGGCTGCATGAGAGGAA
TAGATTACCTTGTGGTGATTCTAACTTTCACGCCTTTGGCAACAATTCAA
ATTGTTTACGTTGTCATACATGTTTGGTTTCGGTTGAACCCTCGTTCTTC
TACACTGGAGAAGTATTTCTTCTGAAAACTAATTACCATGAACATCGATA
CAGTTTGATAGTGTGTTGGATGGActaattcaattttttgcttCGTTTTT
TGCTTCGTTTTTGTAAGATTTATGTATAAAcaattaattcttttgttatt
ttaaaacttttggttTAAATTGTGACACTTTAATCTTAGCTCTGTTTTAN
tattttaaaacttttggttTAAATTGTGACACTTTAATCTTAGCTCTGTT
TTGACCTCATaacttcaaaaattataaatataaatattttcgagtaaaac
tttttttcccaTGAATTAAATAAAATGTATTGGAACACCGTCTTTTGTTT
GTCTTcaccttttttttataagaacaattcagtaagaataaattttgaat
GCTGGTCATGTTCTGGAAACATCTGACATGATCactaaatcactaaaaat
tttcaagaatgaTATCTGGGAGGGTCggaaaatcgcaaaaaaatcggtga
aattcataccgttacagtgcatttttctcaaactttcaaccctttaagag
agaaaaaaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNAGACTCAGAATGAAATACAGTCACAGTATAAATTCAAAAGCAGTC
ATGTTTTGACAAGGATTCCGTAAATCCGTCAACTAGAAATATTGACCTGT
TTTGATGAGACAGGGGTAAAATCAgctaattttgttgtttttttacgtTT
CCTAGTTACCCATAGAGAGCTTAAGAGCACTTTTTTAAGGAGAGGTATAA
CCAAGAGCATCTAAGAAAATCCATCGACGAGTTTCTTTACCAACGATTAA
AAACGATTATTTGTTACTTTGAACATTTGTTTTTTCGAAATTGAGTACTT
TGGTGCTAATTTTTGGGTTTATGTGCTACATAAGACAAAGGATTGCCACA
GAAACACACAAGTGTCTCACAGCCCAGGTGGAAATTCTTCCCACAATTGG
GATAAAATTTCTTCGAAATCCCAAATTATATTATTTCAAGGTCCAAAAAA
TCCAGTGGagttggttttggagtgcagtttTCTTCATCTGTGTTTTCCAG
TCTTGATTCCTAAAAAAAGGCCGAAGGTTACTCGAAAAAAAATCGTTGAC
AAAAACTATTGAACATCATTGACAACCAACAGTTACTTAatacagggtgt
ctacggattttttttcgggattttcaaggttttcaaggttttttggtcat
ttttaagtggtttttcaaggttttttggcaaaacctttggcacttttcaa
ggttttttgatactcagATATGGCTCTTTNgtgtctacggattttttttc
aggattttcaaggttttcaaggttttcaaggtttttttggtcattttaaa
gtggtttttcaaggttttttgatactcagTTGACATGGCTCTTTACAAga
attttggtttttctaagtggtaggtgaaagaaaaatagaagacAGCAAAT
AAAATGTATTTGCTTTTGGTGCCTGGGGAATTACTTCCACAGTTAAATTC
CTATCTCCCTCTCGAGAACAATACCGCAAAAAGAAATACTCCAGCTCCCT
AGTCTTCcaactgtagaaataaagaattagaagcaaaaccaattgtttac
agtgatcgaggaggcgcaaccatggtttgcgccgacgagagaaaattttg
attttgactctttcaaatggctaaaaaacgccttgtttttgatttttttt
aaacaaaaatcaattgccaaaagagttgttttaaggaatcctcgaaattt
tattgataaacggccattattccaagacgccctgaagcgatttgaaaaCT
GGGGAACAGTCGATTTCTTAGGGCTCGAATGCAAACGAGAAATTAGTGAC
AAATCTCAgctaatgataaaaaaatatgtgaCAGAATCGCAACAGAAACA
GGGAAATATGGAATTCTCTAAATGTTATAAAGGTTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGcgcaataaaaatttcaaaatgttttttctt
cgccggaaataagctcttcaaagttgaaataatcttcttcgcaaaagtct
tcattttcttcttcatcaaattttcgcattgcgattcttaaattttcaga
ctcacggataattggcctaacagaatatgtataacatgccacagttttgg
gggctacatcaagtagaactttatattttgtaagtggcaaacTGCCGAGG
TAAAGCAGCGAAACCTGGCTGCTCTCGTACTTGGTTTACgtcatcttttg
gtcttttgtttttgtttcctaTCTCTTTTGTCTCGTTTCTGTTGCTCTTG
GTTTCCTTTGGGTTTGTGTCATTCATTTTGTCTCGTTTATTATACGCACT
TTCTTTTATTAAAGTAATTAATTTGTACATACAGTAATTATCTAGTAATT
AATATAAAAACTAGGAGTTGTCAGTAGAAATCATTCATTCACATCTGAAT
ACTGTAAGCAAGAGAGATGTTGAATGATGAAGTGATATAGTTCACAAacg
ttttgatatttttccacACTTGTTGAATGAGACTGCTGACGCCTTCTAGC
CCCCCAAAACATTGTCAATTTAGTGAGTATTATTTATTTATGTAGCATTA
GTATGTTAGATTTCAgtttagttcatttgtttttctgAGTGCCTTTTTTC
TGTTCTACAGTACCTGGATTAGAGATTTTCTATAGTTTTGTACATTTTTC
TAAAgtagttttgtattttttgttctAGCCTATCGTTTCAATATACCGTT
TTATCGGAGCGATTGAGTCCATTTCCTGATTTCCTGAGATAAGTTTCTTC
GGAATCAACAGTTGAGAATCAGAATCATTTCCATATCAAGACAGCTTAAG
AAACGCAACAATGGCTTTTGGAAACAGTTCTACATTAATCATGACGACAT
TAAGCAACACTACAGAAAATACTGTATTCGAATGTTTCAAGCTACCCATT
ACAGTTGGGAATGATACGTTTTGTGGTAATAATTTAACAAGATGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AATTTGAGATGTATCGAGTTGAATTTGATATCAAAGACGAGAGCGAGAAT
GGAGATAAAGATAAAATCAAATTGAATTGTATCGTGAGATGTTTCCAGGG
GATCGGCCGGTGTTTCAAAGTGGAAGATTTAGGGTGGAAATTCATATCAC
TCAAAACTTTCGTAACAATCAAATTTCTAACATATGTTAAACAAGCTTTG
GAAGTTCTGGATGTGATCCTGGATTGTTTCTTGCTTTACCAATTAGAATC
TGGTCAAATATTCGATGATGTTGTTCACCGAAACGTTTACGTCACTAATG
TAATTTACGCACTCATCTGGTTAAGTATCATGGTCCAATTTTGTTCTTGT
GATTGTTGTCCAGTGGATAACATTTTTgttcattggctctgttcagcTTA
TCTTGGAGTATTTTTATATGGACAAATTTGTCAACCGAAAAACCGATTGG
TATTTGTTTGTGAAGAGTGCAATGCAACTGGTCATGACTTGCTGGACTAT
TTATTCAGCTATTCAGAATGCAAAACGTGCTCGTTTGGTGAAGCTTATGG
ACAAGGGTGGAAATGAAGATTCAGGTAATGTCGTCAATGATATCATCGAA
CAACGTAAACAGGATGGTTTGGAAATCGATTCTGAACTGCTTGCAGCTCA
GGCATTACAACAAATGTGTAAAGAAAATATTCAGAAGCTTGATGAACTGG
AGAATCAACATCGAAAACGGGCCAACATGAAACCACTCGACCCTAACCAA
GAGAAAGACGGATCAGTCAAGATGAAGTTTTTCTCCTATATGATGATCCC
AATTGCCATGGCAACCATGTGTCGTGTCATTGGTTCCACTTTCCAATACG
GTACCGGAAAAATTGACCGATCCTGTTTCACTGTTGAGGATGGAGGAAAG
ATATTCCAAAGTCCTTTTGATTCAGGTTGTATGAGAGGAATAGATTACCT
TGTGGTGATTCTAACTTTCACGCCTTTGGCAACAATTCAAATTGTTTACG
CTGTCATACATGTTTGGTTTCGGTTGAACCCTCGTTCTTCTACACTGGAG
AAATATTTCTTCTGAAAACTAATTACCATGAACATCGATACAGTTGGATA
GTGTGTTGGATGGActaattcacttttttgcttcgtT Coding sequence (CDS) from alignment at sc0003005:7092..14328+ >TCONS_00041755 ID=TCONS_00041755|Name=TCONS_00041755|organism=Clytia hemisphaerica|type=CDS|length=675bp|location=Sequence derived from alignment at sc0003005:7092..14328+ (Clytia hemisphaerica)
GTTCAGCTTATCTTGGAGTATTTTTATATGGACAAATTTGTCAACCGAAA
AACCGATTGGTATTTGTTTGTGAAGAGTGCAATGCAACTGGTCATGACTT
GCTGGACTATTTATTCAGCTATTCAAAATGCAAAACGTGCTCGTTTGGTG
AAGATTATGGACAAGGGTGGAAATGAAGATTCAGGTAATGTCGTTAATGA
TATCATCGAACAACGTAAACAGGATGGTTTGGAAATCGATTCTGAACTGC
TTGTAGATCAGGCATTACAACAAATGTGTAAAGAAAATATTCAGAAGCTT
GATGAACTGGAGAATCAACATCGAAAACGGGCCAATATGAAACCACTCGA
CCCTAACCAAGAGAAAGACGCATCAGTCAAGATGAAGTTTTTCTCCTATA
TGATGATCCCAATCGCCATGGCAACCATGTGTCGTGTCATTGGTTCCACT
TACCAATACGGTACCGGCAAAATTGACCGATCCTGTTTCACTGTTGAGGA
TGGAGGAAAGATATTCCAAAGTCCTTTTGATTCAGGCTGCATGAGAGGAA
TAGATTACCTTGTGGTGATTCTAACTTTCACGCCTTTGGCAACAATTCAA
ATTGTTTACGTTGTCATACATGTTTGGTTTCGGTTGAACCCTCGTTCTTC
TACACTGGAGAAGTATTTCTTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041755-exon-sc0003005-1491911889:7092..7784 | TCONS_00041755-exon-sc0003005-1491911889:7092..7784 | Clytia hemisphaerica | exon |
| TCONS_00041755-exon-sc0003005-1510915933:7092..7784 | TCONS_00041755-exon-sc0003005-1510915933:7092..7784 | Clytia hemisphaerica | exon |
| TCONS_00041755-exon-sc0003005-1575043694:7092..7784 | TCONS_00041755-exon-sc0003005-1575043694:7092..7784 | Clytia hemisphaerica | exon |
| TCONS_00041755-exon-sc0003005-1491911889:14275..14328 | TCONS_00041755-exon-sc0003005-1491911889:14275..14328 | Clytia hemisphaerica | exon |
| TCONS_00041755-exon-sc0003005-1510915933:14275..14328 | TCONS_00041755-exon-sc0003005-1510915933:14275..14328 | Clytia hemisphaerica | exon |
| TCONS_00041755-exon-sc0003005-1575043694:14275..14328 | TCONS_00041755-exon-sc0003005-1575043694:14275..14328 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0003005 | supercontig | sc0003005:7092..14328 + |
Blast
The following BLAST results are available for this feature:
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