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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041746 ID=TCONS_00041746|Name=TCONS_00041746|organism=Clytia hemisphaerica|type=transcript|length=1097bp
CTGAAGTTTGACCCTTACTGAAATCCTTGGTTTGGACATTTTAGTTGGAA
TTAGTTACTGTGTTTGTGAAAGTCGCTCTGATTGTATTGACTGGTTTTGA
AATCGCTTTCAAAATTCCTGATCACAATGAATCCGTACTACTTGTCCAGT
TAAATAAAACAGTCGGAAACGGGTCGTATATACCTCATGGAAAGATCATC
AAAATACACAATCCCAACTTCAACGCAGTTTTATCGTACATGCAAGGATG
ATGACGATGTACTGACTTGTACCTACTTCATTCGAATGCATAACTGTGCA
TAAAtacatttcaaaacttttagtGCGTGATGGAAGATGAAGGTTTTTGT
ATGAAGTTTGTAAAGGATTATGGTTAATATTACTTGATATTATGGATTAA
AGCTTCCAGAATGCAACAATACTGGttacatttttcaaagtctAGTTACG
GACGGACAGGGAATGTGCTAAGCTTTTTAGTACAATTCAATTTGAGTGCC
CTATTATTGATTATTTTTGCATTGACACGTATGCAGCCAGGCATGATTTT
TCATTATGAAATCTCAAATTTCAACATCTATCAACGAAAGCGATTTGTAT
GCTACAGTTTCTCCATAGTAGGATAGAGATATTGAATGCGTTGGTGGATT
TACTTGGACAATCTGTTTTAATGACATTGATAAGCTGTGACTCAGTTCAA
CAGAGCTTTTCCTAAAGAACACTTTGAAGAGTGACAACTCTGGGGGATAA
TGCCCTTCTTAATCATCAAACCAGGAAGTCAAGACTATAAAGCAAAAGAA
CTAAACTAAGGGAACATCCTCGTTTGGAAAAAGACACAACAAAACACACA
CTTTGTGTGTAAGGTGTGGACGTTCTGCATATCACATCCAAAAGAAAGTA
TGTGGTGCTTGTGGGTTCCCATCCGCTAGAAAGAGAACATGTGAGTCCTT
TTCCTACTTTGATCGTTTTTAATCTTTCATCTATAAGTACAAGAAATAAA
ccattaaaaatatatatacattTTGTTGTGAGAATGAAAACGCCTGCATG
TTTTTGGGTTGCTCTCTGAccagggggggtcaagcagttagtacaag Run BLAST on NCBI transcript from alignment at sc0002996:1..1255+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041746 ID=TCONS_00041746|Name=TCONS_00041746|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at sc0002996:1..1255+ (Clytia hemisphaerica)
CTGAAGTTTGACCCTTACTGAAATCCTTGGTTTGGACATTTTAGTTGGAA
TTAGTTACTGTGTTTGTGAAAGTCGCTCTGATTGTATTGACTGGTTTTGA
AATCGCTTTCAAAATTCCTGATCACAATGAATCCGTACTACTTGTCCAGT
TAAATAAAACAGTCGGAAACGGGTCGTATATACCTCATGGAAAGATCATC
AAAATACACAATCCCAACTTCAACGCAGTTTTATCGTACATGCAAGGATG
ATGACGATGTACTGACTTGTACCTACTTCATTCGAATGCATAACTGTGCA
TAAAtacatttcaaaacttttagtGCGTGATGGAAGATGAAGGTTTTTGT
ATGAAGTTTGTAAAGGATTATGGTTAATATTACTTGATATTATGGATTAA
AGCTTCCAGAATGCAACAATACTGGttacatttttcaaagtctAGTTACG
GACGGACAGGGAATGTGCTAAGCTTTTTAGTACAATTCAATTTGAGTGCC
CTATTATTGATTATTTTTGCATTGACACGTATGCAGCCAGGCATGATTTT
TCATTATGAAATCTCAAATTTCAACATCTATCAACGAAAGCGATTTGTAT
GCTACAGTTTCTCCATAGTAGGATAGAGATATTGAATGCGTTGGTGGATT
TACTTGGACAATCTGTTTTAATGACATTGATAAGCTGTGACTCAGTTCAA
CAGAGCTTTTCCTAAAGAACACTTTGAAGAGTGACAACTCTGGGGGATAA
TGCCCTTCTTAATCATCAAACCAGGAAGTCAAGACTATAAAGCAAAAGAA
CTAAGTAATCAAGAAATACTTTAACATATTACTTTGGACAAATCTTTGAT
AGCATTNctacaattgggcctatgaataatttgaagccactgaagttgag
cccagtgcgttgcgcacgttcgactatttattaatcaatctttgttttct
atttcattTCAGACTAAGGGAACATCCTCGTTTGGAAAAAGACACAACAA
AACACACACTTTGTGTGTAAGGTGTGGACGTTCTGCATATCACATCCAAA
AGAAAGTATGTGGTGCTTGTGGGTTCCCATCCGCTAGAAAGAGAACATGT
GAGTCCTTTTCCTACTTTGATCGTTTTTAATCTTTCATCTATAAGTACAA
GAAATAAAccattaaaaatatatatacattTTGTTGTGAGAATGAAAACG
CCTGCATGTTTTTGGGTTGCTCTCTGAccagggggggtcaagcagttagt
acaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041746-exon-sc0002996-1491911889:1..804 | TCONS_00041746-exon-sc0002996-1491911889:1..804 | Clytia hemisphaerica | exon |
| TCONS_00041746-exon-sc0002996-1510915933:1..804 | TCONS_00041746-exon-sc0002996-1510915933:1..804 | Clytia hemisphaerica | exon |
| TCONS_00041746-exon-sc0002996-1575043694:1..804 | TCONS_00041746-exon-sc0002996-1575043694:1..804 | Clytia hemisphaerica | exon |
| TCONS_00041746-exon-sc0002996-1491911889:963..1255 | TCONS_00041746-exon-sc0002996-1491911889:963..1255 | Clytia hemisphaerica | exon |
| TCONS_00041746-exon-sc0002996-1510915933:963..1255 | TCONS_00041746-exon-sc0002996-1510915933:963..1255 | Clytia hemisphaerica | exon |
| TCONS_00041746-exon-sc0002996-1575043694:963..1255 | TCONS_00041746-exon-sc0002996-1575043694:963..1255 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002996 | supercontig | sc0002996:1..1255 + |
Blast
The following BLAST results are available for this feature:
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