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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041739 ID=TCONS_00041739|Name=TCONS_00041739|organism=Clytia hemisphaerica|type=transcript|length=767bp
AAGGCTTTCAGCTTTTCGTTTCAAGTTTCTGTCCTTAATGTTCAGTAGTT
TCTCTCTCAACCCTGGCGCGTCGCCGTGATCTGttgggaaaaaagaaaat
gaatagtTTTTTGTTACCTTTGTAGTGATCATATCATGAAATGATAATGC
AAATTGATAATCGTTGGAGAAAGCAGAGCTCCTTTAAACACGTTTGTACG
GAGACATTGACGCCGAAACAGTGATGCACGGAGGCATTGTCACGGAAGCA
TATCTTTCACTTGGTTGCAATCATGGTAAACAGGCTTCCAATGAAGCGAG
AAATGTCGTCAACCTCATTTTTTCCCCAATGACATGAAAATGCGTTGATT
GCTGATGTCCCTGGGCAGTATTCACGAGAGTTGAATCTAGGGGATTTTTT
GTTTAGGTTATCTGCAAATCTGTCGATTGTAATTTGTCCATAGTTTTTAA
TAATGTAATCGAAAGTCTCGTTGTCAATGGACCAATTATCTGTGTCGAtc
gattttgaaattatatcgGCTGTTTCGTTTGACGCTCTAGGGATCCAATT
AGGATAAATTTCGATATTGTGTAGTaaacaaatgttgaaaatatcgATTG
CAATGTTTTGTAAGTGTTGTTTTGTACTACCTCGATTAATAATTCTACAT
ATATTGTCGCTGTCTGTAAACCACTCCACTGTCTCGTTTTCGAGTAATTG
AGGAAAAGATAGCAAAATGTATTTAACTGCCGTTAGCTCACGAAATGTCG
AACTTGTTTCCCTTTCG Run BLAST on NCBI transcript from alignment at sc0002994:29029..30140+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041739 ID=TCONS_00041739|Name=TCONS_00041739|organism=Clytia hemisphaerica|type=transcript|length=1112bp|location=Sequence derived from alignment at sc0002994:29029..30140+ (Clytia hemisphaerica)
AAGGCTTTCAGCTTTTCGTTTCAAGTTTCTGTCCTTAATGTTCAGTAGTT
TCTCTCTCAACCCTGGCGCGTCGCCGTGATCTGttgggaaaaaagaaaat
gaatagtTTTTTGTTACCTTTGTAGTGATCATATCATGAAATGATAATGC
AAATTGATAATCGTTGGAGAAAGCAGAGCTCCTTTAAACACGTTTGTACG
GAGACATTGACGCCGAAACAGTGATGCACGGAGGCATTGTCACGGAAGCA
TATCTTTCACTTGGTTGCAATCATGGTAAACAGGCTTCCAATGAAGCGAG
AAATGTCGTCAACATAAAACAGGAAAAAATACAATTGTTAAGGGAATTAG
ATGACAAAGAAGTTGTATTTATTTCAATAGGTTATTTCTTATTCTAACAT
ATCGATGAACAAGGCTAAGGAATAAAATTTGGCAAAGCCATCAAAAACGC
ATTTAGTGTTGGAATAATTTACAAAGAAAGGATCTAGTACTAAAAACATT
CTTACAAAAGGTTCAAATTGAAGACCGTTTGACGTCAGTAATGGCCAATA
GTATGACGAAGGCCACAAGGGAACAAGCAATATTCCTTTACCTTTACAGT
TTCTCAAGTGCTGAATAGTTTTACCTACTAGTGATATGGGAGGGCAAAGC
CAATTAACCTCATTTTTTCCCCAATGACATGAAAATGCGTTGATTGCTGA
TGTCCCTGGGCAGTATTCACGAGAGTTGAATCTAGGGGATTTTTTGTTTA
GGTTATCTGCAAATCTGTCGATTGTAATTTGTCCATAGTTTTTAATAATG
TAATCGAAAGTCTCGTTGTCAATGGACCAATTATCTGTGTCGAtcgattt
tgaaattatatcgGCTGTTTCGTTTGACGCTCTAGGGATCCAATTAGGAT
AAATTTCGATATTGTGTAGTaaacaaatgttgaaaatatcgATTGCAATG
TTTTGTAAGTGTTGTTTTGTACTACCTCGATTAATAATTCTACATATATT
GTCGCTGTCTGTAAACCACTCCACTGTCTCGTTTTCGAGTAATTGAGGAA
AAGATAGCAAAATGTATTTAACTGCCGTTAGCTCACGAAATGTCGAACTT
GTTTCCCTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041739-exon-sc0002994-1491911889:29029..29341 | TCONS_00041739-exon-sc0002994-1491911889:29029..29341 | Clytia hemisphaerica | exon |
| TCONS_00041739-exon-sc0002994-1510915933:29029..29341 | TCONS_00041739-exon-sc0002994-1510915933:29029..29341 | Clytia hemisphaerica | exon |
| TCONS_00041739-exon-sc0002994-1575043694:29029..29341 | TCONS_00041739-exon-sc0002994-1575043694:29029..29341 | Clytia hemisphaerica | exon |
| TCONS_00041739-exon-sc0002994-1491911889:29687..30140 | TCONS_00041739-exon-sc0002994-1491911889:29687..30140 | Clytia hemisphaerica | exon |
| TCONS_00041739-exon-sc0002994-1510915933:29687..30140 | TCONS_00041739-exon-sc0002994-1510915933:29687..30140 | Clytia hemisphaerica | exon |
| TCONS_00041739-exon-sc0002994-1575043694:29687..30140 | TCONS_00041739-exon-sc0002994-1575043694:29687..30140 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002994 | supercontig | sc0002994:29029..30140 + |
Blast
The following BLAST results are available for this feature:
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