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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041737 ID=TCONS_00041737|Name=TCONS_00041737|organism=Clytia hemisphaerica|type=transcript|length=395bp
tttttccttttcgaaatgaacagaaaaatagaaaacaataaagttacttt
ttcattggtattTGCTTGCATTAAACACGagagagaaaaagaaagaggaa
aaaacaaCCATATTCTTTAAATATAATAAATGGGCATTTAAATTCCCAAT
GAACGTGAAACTCTAAATCTAGTTTCGGCTTTGTCTTTTATGTAAGTGTT
CCTGCTGGTGTTTGAAGACCATCGACCATGTTTTGAGATAAGACGATCAG
AAATACCGTTGTTCGCAGCCTCTGATGCTCCTCCTGACCTCAAGGAATGT
AAACCGTATATGGTAGGGTCGGTCATTTTTGAGATATGGTCTTTGAATGT
GCTTATGGCTGTCGTATAGGATATTGGGCGGTGGCTATGCACGTT Run BLAST on NCBI transcript from alignment at sc0002994:26351..27821+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041737 ID=TCONS_00041737|Name=TCONS_00041737|organism=Clytia hemisphaerica|type=transcript|length=1471bp|location=Sequence derived from alignment at sc0002994:26351..27821+ (Clytia hemisphaerica)
tttttccttttcgaaatgaacagaaaaatagaaaacaataaagttacttt
ttcattggtattTGCTTGCATTAAACACTCAGATccgataaaaataaaaa
taaaatttttaatggAAATAAATACAAATCCTAATAGATATGATGGCATA
ATATCTAAGTACATGGGATAAATTTTATATTTAGCTAAGATAACTTATCG
CTGTAAATTTGTCGGAAAAAACAAATAATGTATAAATGGTTTGTTGAAAT
GTTCGTCATATGCATAACTTGAGATGATGTTCGGTAAGTATGTCTCGTTT
GTTTATGTTGTTCAACCGCCTTGTGTTGCTATAAGTGAGGATGTAATCGT
GGAAGGATAATGTGTAGAACGCGTATGCTGTTACTAATGTAATCCAATGT
AACAGTAAGTGAATAATACAACCAATCGATGccattgaaaaatgaaagag
caCAATTGTACATTAGTTATTACAAAAAGCAATAGGAATGagaataaata
aaacaaaaatagtaATTTGAATAGTATGTTATTATAGatacaaaaaaaga
attattatagacattagatataaaataattatttaagaTACAAATTACAC
GTCTAGAGTATACGATCCTCGAATGCCTGGATTAAAAAGCCTCCGTCATC
ATTTATTAGAGGAAAAACCTTGGCAGACTACGCAAACTCgaataaaatat
ttataatatacTATTGATCCTTGGTTGTCCTTTCCGTGGCTAGGGTTTCC
ATTCCAATCTTTCGTTCTCTTTGTATGTTGAATCGGTGTCTTTGGTACGT
TCGTCCGGATAAGTGCATCGATTGGTACGTTGGTCCAGATAAGTGCATGA
AATAGCAAACGAAATTGTTTGAATTTACATTAGTTAACTTCTTTGAGTGA
ATGCAAGAGCGaggattttctcaattttttgaacAGAATATAAAGGCTGA
ATAGCGCATGCATCTCATTATTACATAATGACGTGCATGCATAATTAAAA
TGCATTTCCGTGCAAAATTGTCGAGAACCTgtttttccagcttttttcaa
TCGCTGGAAACTTTGCTTCTCGACTATTTTTCCTTTTCGAAATGAacaga
aaaatagaaaacaataaagttactttttcattggtattTGCTTACATTAA
ACACGagagagaaaaagaaagaggaaaaaacaaCCATATTCTTTAAATAT
AATAAATGGGCATTTAAATTCCCAATGAACGTGAAACTCTAAATCTAGTT
TCGGCTTTGTCTTTTATGTAAGTGTTCCTGCTGGTGTTTGAAGACCATCG
ACCATGTTTTGAGATAAGACGATCAGAAATACCGTTGTTCGCAGCCTCTG
ATGCTCCTCCTGACCTCAAGGAATGTAAACCGTATATGGTAGGGTCGGTC
ATTTTTGAGATATGGTCTTTGAATGTGCTTATGGCTGTCGTATAGGATAT
TGGGCGGTGGCTATGCACGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041737-exon-sc0002994-1491911889:26351..26419 | TCONS_00041737-exon-sc0002994-1491911889:26351..26419 | Clytia hemisphaerica | exon |
| TCONS_00041737-exon-sc0002994-1510915933:26351..26419 | TCONS_00041737-exon-sc0002994-1510915933:26351..26419 | Clytia hemisphaerica | exon |
| TCONS_00041737-exon-sc0002994-1575043694:26351..26419 | TCONS_00041737-exon-sc0002994-1575043694:26351..26419 | Clytia hemisphaerica | exon |
| TCONS_00041737-exon-sc0002994-1491911889:27496..27821 | TCONS_00041737-exon-sc0002994-1491911889:27496..27821 | Clytia hemisphaerica | exon |
| TCONS_00041737-exon-sc0002994-1510915933:27496..27821 | TCONS_00041737-exon-sc0002994-1510915933:27496..27821 | Clytia hemisphaerica | exon |
| TCONS_00041737-exon-sc0002994-1575043694:27496..27821 | TCONS_00041737-exon-sc0002994-1575043694:27496..27821 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002994 | supercontig | sc0002994:26351..27821 + |
Blast
The following BLAST results are available for this feature:
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