|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041731 ID=TCONS_00041731|Name=TCONS_00041731|organism=Clytia hemisphaerica|type=transcript|length=1507bp
CTCAGTCCCTGCAACTATGAGTAGGTTGACGACAGGAAAGACATCGGGTC
ATAAAACTCAAGGTGTTTTCCGTGCCAATAATTGAATGACTAAACATAGT
TAGTCGCGAACGGTTGCGTATTCTGTGGCGAGTAGCCTTTTCTAATGTGC
CGGGCAGCTCTAGATGGGCTTTATCGATCGTGCATATTACACATGGCCCT
GGCAGCCAATTATGAAAACTAAAATATGGTTCTTTGAATGTTGGAAGCAT
GAGAGGTAGATCTGGAGAAGTTGTAGAGACAGTTTCACGTCGCGAAATTT
CAATCTGTGCGATTTAAGAATCTCGCTGGAAAAGTTATTTAGCCAGAGAA
ATCAGTGGTAAAAACAGCAAATATAAATACTTCTGGTGTGGTGGTGTTAC
TGGTTATGATGGTGCTGGTATCCTTCTTGATGAAGCTTTTATCGAAAATG
TTATATCAGTTGAAAGTATAAACAGTAGGATTATGTATATCCGTATCATG
ATATAGAAATCAATCATCCGTTTCTTCAGTGTCTATGCACCTCAAACTGG
TCTTCCTGAATCTGAGAAAGACAAATTTTATAATGATCTCTTGGCTCAAA
CGGCCATAACTCCAGCAGAGTAATTTTCAATAATATGTGGTGATCTCAAT
GGTCATGCTGGCAAGGATACAGCTGGCTTCGACAATGTTCATGGTGGAAA
TGGTTATGGTCCTAGAAATGCTGACGGTGTTAGGTCTCTAGACTTCCGTT
TAGCTGCTAATCTATCTATCACAAACACTTTCATTTCCAAACCAGACAGT
AAATTGATCACTTACTAGTCTGGACCATCTGTATCTCAAATAGATTTTAT
TCTTATCCCTCGTAACCACCTTAAATTAGTTCATGATGTTACTGTTATAA
ATGGGGAAGAATGTACACCCCATCACAAATTAATTATTGGTGACATGAAA
CCTTCCCTAGACGTGTCTGGAAACTGAAAGACCCTgctttctccaaagtc
tttcgtGAATGTGTTGACTCTAAATTACAAAACGTTGTCATTGCCAATGA
TATTGAGTCTTGGAAAATATTAAAGTCTTCCATTCTTGATAGTCATTCAT
TTCATCAGTCAGTCATTTGATACAACTTATGGTTGGTCTAAATCGCAACA
GAGGTGTAAAGAAACTTGATGGTGGAATGAAACCTTTGATTTTGCGGTGA
AGGAAAAGCGCAGACTTTGGAAATGTTGGAAACAAGGTGGTCAGAAAGAG
CCCTACTTGGCTGCCAAACGTAGAGCGAAGTCTGGGGTTTATATTGCTAA
GAAAAATGCTTCAAATGAAAGATTTTGCTATCTTCATGATAAGGATAAGC
TGAATCATGTTTTCCAGCTTGCCAGAaagttaaaatctgaaaatcaggAC
ATTGTTGGCGAGAAATTTATCAAGAATAAAGAAGGTGTCATTGTGTATGA
TGATAAGTCGAAATTAGATGTTTGGAAGCAACATTACGCGGTACTTTTGA
ATTCGGA Run BLAST on NCBI transcript from alignment at sc0002992:1077..2583 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041731 ID=TCONS_00041731|Name=TCONS_00041731|organism=Clytia hemisphaerica|type=transcript|length=1507bp|location=Sequence derived from alignment at sc0002992:1077..2583 (Clytia hemisphaerica)
TCCGAATTCAAAAGTACCGCGTAATGTTGCTTCCAAACATCTAATTTCGA
CTTATCATCATACACAATGACACCTTCTTTATTCTTGATAAATTTCTCGC
CAACAATGTcctgattttcagattttaacttTCTGGCAAGCTGGAAAACA
TGATTCAGCTTATCCTTATCATGAAGATAGCAAAATCTTTCATTTGAAGC
ATTTTTCTTAGCAATATAAACCCCAGACTTCGCTCTACGTTTGGCAGCCA
AGTAGGGCTCTTTCTGACCACCTTGTTTCCAACATTTCCAAAGTCTGCGC
TTTTCCTTCACCGCAAAATCAAAGGTTTCATTCCACCATCAAGTTTCTTT
ACACCTCTGTTGCGATTTAGACCAACCATAAGTTGTATCAAATGACTGAC
TGATGAAATGAATGACTATCAAGAATGGAAGACTTTAATATTTTCCAAGA
CTCAATATCATTGGCAATGACAACGTTTTGTAATTTAGAGTCAACACATT
CacgaaagactttggagaaagcAGGGTCTTTCAGTTTCCAGACACGTCTA
GGGAAGGTTTCATGTCACCAATAATTAATTTGTGATGGGGTGTACATTCT
TCCCCATTTATAACAGTAACATCATGAACTAATTTAAGGTGGTTACGAGG
GATAAGAATAAAATCTATTTGAGATACAGATGGTCCAGACTAGTAAGTGA
TCAATTTACTGTCTGGTTTGGAAATGAAAGTGTTTGTGATAGATAGATTA
GCAGCTAAACGGAAGTCTAGAGACCTAACACCGTCAGCATTTCTAGGACC
ATAACCATTTCCACCATGAACATTGTCGAAGCCAGCTGTATCCTTGCCAG
CATGACCATTGAGATCACCACATATTATTGAAAATTACTCTGCTGGAGTT
ATGGCCGTTTGAGCCAAGAGATCATTATAAAATTTGTCTTTCTCAGATTC
AGGAAGACCAGTTTGAGGTGCATAGACACTGAAGAAACGGATGATTGATT
TCTATATCATGATACGGATATACATAATCCTACTGTTTATACTTTCAACT
GATATAACATTTTCGATAAAAGCTTCATCAAGAAGGATACCAGCACCATC
ATAACCAGTAACACCACCACACCAGAAGTATTTATATTTGCTGTTTTTAC
CACTGATTTCTCTGGCTAAATAACTTTTCCAGCGAGATTCTTAAATCGCA
CAGATTGAAATTTCGCGACGTGAAACTGTCTCTACAACTTCTCCAGATCT
ACCTCTCATGCTTCCAACATTCAAAGAACCATATTTTAGTTTTCATAATT
GGCTGCCAGGGCCATGTGTAATATGCACGATCGATAAAGCCCATCTAGAG
CTGCCCGGCACATTAGAAAAGGCTACTCGCCACAGAATACGCAACCGTTC
GCGACTAACTATGTTTAGTCATTCAATTATTGGCACGGAAAACACCTTGA
GTTTTATGACCCGATGTCTTTCCTGTCGTCAACCTACTCATAGTTGCAGG
GACTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041731-exon-sc0002992-1491911889:1077..2583 | TCONS_00041731-exon-sc0002992-1491911889:1077..2583 | Clytia hemisphaerica | exon |
| TCONS_00041731-exon-sc0002992-1510915933:1077..2583 | TCONS_00041731-exon-sc0002992-1510915933:1077..2583 | Clytia hemisphaerica | exon |
| TCONS_00041731-exon-sc0002992-1575043694:1077..2583 | TCONS_00041731-exon-sc0002992-1575043694:1077..2583 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002992 | supercontig | sc0002992:1077..2583 . |
Blast
The following BLAST results are available for this feature:
|
