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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041722 ID=TCONS_00041722|Name=TCONS_00041722|organism=Clytia hemisphaerica|type=transcript|length=140bp
GACGGCtcaaaacaaacagaaattATTTCACAGAAATTGACCGATTTCAG
TTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatgaagAGCTAC
GGCAAAACTATTTCAGgaTGGCGTTTACTCTTTCAACTTC Run BLAST on NCBI transcript from alignment at sc0002988:4177..5083- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041722 ID=TCONS_00041722|Name=TCONS_00041722|organism=Clytia hemisphaerica|type=transcript|length=907bp|location=Sequence derived from alignment at sc0002988:4177..5083- (Clytia hemisphaerica)
GACGGCTCAAAACAAACAGAAATTATTTCACAGAAATTGACCGATTTCAG
TTTCGACGTTTCACAATCTCTAGATGATTTTAACAAAAATGAAGAGCTAC
GGCAAAACTATTTCAGGTATAATCTTTCTTTTGAAATTTTCAAGTATTAA
TGATCTTTATTATTGCAAAAAGCTCAATGAGAGGATATCAGTCATATTTT
CCAAAATTAGGTGCCCGCTAATCCTTTAACCAAATAAATTCCAGACAAAA
AAGAAATACATAATTTTTTTCCTTCAGGATGGCGTTTACTCTTTCAACTT
CCATTTCATCTTTGGGAACGTAAGTCAATACAGTTGATGTCCTCTGATTC
AGCATTGTCAATCAACTNNNNNNNNNNNNNNNNNNNNNNNNNNGGATGGC
GTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGTAAGTCAATACAG
TTGATGTCCTCTGATTCAGCATTGTCAATCAACTAACAGTCACTTGGCAA
ATTCCCTTTAAATTTCTCATATAAGACTTTTTTATCGGACATTATATCAC
TATCATCTCCCTGGGGTTGGGGTAATTAAAATTCACGATTTAACGATTTA
CGATTCACGATTTGCGATGCACGATTTCCGATCCATGTTCCATGTATAAA
TTATGCTGATTTATGCCTAATCATGCTAATCATAACAAAATGATTTGAAA
ACGGAGTTTAGTTCGGGGGGGGGGGGGGACATNAAATATTCAATTTTCAA
TTTTCAATGATCTTTATTATTGCAAAGAGCTCAATGAGAGGATATAAGTC
ATATTTTCCAAAATTAGGTGCCCGTTAATCCTTTAACCAAATATATTCCA
GACTAAAAAAATACATTATTTTTTTTCCTTCAGGATGGCGTTTACTCTTT
CAACTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041722-exon-sc0002988-1575043694:4968..5083 | TCONS_00041722-exon-sc0002988-1575043694:4968..5083 | Clytia hemisphaerica | exon |
| TCONS_00041722-exon-sc0002988-1575043694:4177..4200 | TCONS_00041722-exon-sc0002988-1575043694:4177..4200 | Clytia hemisphaerica | exon |
| TCONS_00041722-exon-sc0002988-1510915933:4968..5083 | TCONS_00041722-exon-sc0002988-1510915933:4968..5083 | Clytia hemisphaerica | exon |
| TCONS_00041722-exon-sc0002988-1510915933:4177..4200 | TCONS_00041722-exon-sc0002988-1510915933:4177..4200 | Clytia hemisphaerica | exon |
| TCONS_00041722-exon-sc0002988-1491911889:4968..5083 | TCONS_00041722-exon-sc0002988-1491911889:4968..5083 | Clytia hemisphaerica | exon |
| TCONS_00041722-exon-sc0002988-1491911889:4177..4200 | TCONS_00041722-exon-sc0002988-1491911889:4177..4200 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002988 | supercontig | sc0002988:4177..5083 - |
Blast
The following BLAST results are available for this feature:
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