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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041700 ID=TCONS_00041700|Name=TCONS_00041700|organism=Clytia hemisphaerica|type=transcript|length=656bp
aaagagtaaacgcaagacagaaggtttggttttgttgatcaggtatgttt
ttattctatccgaactaatgttaaaaaagaccaaagaggtcctgactgga
GTGATATCTTTACACATACCCAGGCCTGGTGCATTGAAGACTTTATCTCA
ATAGgctaaatttaaaaacataGTCCCGAATTTTAAGAGACGTTGCCAAT
GTATACTGGCATTATAATCAACCAGCGAATGGCTGAGGTTATTATTATCA
ACCAGAGAATGGCTGTTTTTGGGGTAAGGGTGTTTCCTTTTTGGGGTGAC
TTTTAATATATCTACTGTTTGTTATcgtaaaattgaattatttatATGGT
ATCTGCTAAAAAAGGGAATGCTCTACTGAAGCTTAATACTTTCTCCTAAG
AGNAATTAATTTGGCACCGGATTGAATCGTATCTTCAAAACCGTCAACCA
AATGTCTTCGCCAAACATCATATCAGTGTTAACCAGAATTTACTTGTCAC
CTAAATGTATATTCAGGATACGACCCATAAGAAAagGTTGCACAAATTCG
TCTGTCTgaaattatcattgatacctGATACTTTTGCACTCTTGCTGCTG
GTGTAATATGATGAAGCAATGAAAATACTTTAAATTCGGCAGGTAGACTA
ATCCNN Run BLAST on NCBI transcript from alignment at sc0002977:2120..3148+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041700 ID=TCONS_00041700|Name=TCONS_00041700|organism=Clytia hemisphaerica|type=transcript|length=1029bp|location=Sequence derived from alignment at sc0002977:2120..3148+ (Clytia hemisphaerica)
aaagagtaaacgcaagacagaaggtttggttttgttgatcaggtatgttt
ttattctatccgaactaatgttaaaaaagaccaaagaggtcctgactgga
GTGATATCTTTACACATACCCAGGCCTGGTGCATTGAAGACTTTATCTCA
ATAGgctaaatttaaaaacataGTCCCGAATTTTAAGAGACGTTGCCAAT
GTATACTGGCATTATAATCAACCAGCGAATGGCTGAGGTTATTATTATCA
ACCAGAGAATGGCTGTTTTTGGGGTAAGGGTGTTTCCTTTTTGGGGTGAC
TTTTAATATATCTACTGTTTGTTATcgtaaaattgaattatttatATGGT
ATCTGCTAAAAAAGGGAATGCTCTACTGAAGCTTAATACTTTCTCCTAAG
AGNAATTAATTTGGCACCGGATTGAATCGTATCTTCAAAACCGTCAACCA
AATGTCTTCGCCAAACATCATATCAGTGTTAACCAGAATTTACTTGTCAC
CTAAATGTATATTCAGGATACGACCCATAAGAAAaggtaaaattaaattt
taaaatatgtttCTTATGTTGATCTTAACAGTTTATGGTTGAAAgagatt
ttctcaatttttttatttcacagaATGACATAATGGATATGAATAAAATG
CtgatatgtttttaaaaactttaaacttaTAATTTCCCATATTACGAATC
ACAAAAATTTATGATGTAATTTTTCGAAGCAACTGTTACAATTTTTATAA
GGGATTATATTATATCAGACAGTTCTGGTTTTGGGATTGTTCTAATTTTC
GTGGTCCccaataaaaatttatatttgcTGTTTTGACCTTTTTTGCTACG
CCAATAAGGTATGGACAAGTTTTGAAATTGGTAATAATTTCCTACTCTTT
ATTTTTCAGGTTGCACAAATTCGTCTGTCTgaaattatcattgatacctG
ATACTTTTGCACTCTTGCTGCTGGTGTAATATGATGAAGCAATGAAAATA
CTTTAAATTCGGCAGGTAGACTAATCCNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041700-exon-sc0002977-1491911889:2120..2655 | TCONS_00041700-exon-sc0002977-1491911889:2120..2655 | Clytia hemisphaerica | exon |
| TCONS_00041700-exon-sc0002977-1510915933:2120..2655 | TCONS_00041700-exon-sc0002977-1510915933:2120..2655 | Clytia hemisphaerica | exon |
| TCONS_00041700-exon-sc0002977-1575043694:2120..2655 | TCONS_00041700-exon-sc0002977-1575043694:2120..2655 | Clytia hemisphaerica | exon |
| TCONS_00041700-exon-sc0002977-1491911889:3029..3148 | TCONS_00041700-exon-sc0002977-1491911889:3029..3148 | Clytia hemisphaerica | exon |
| TCONS_00041700-exon-sc0002977-1510915933:3029..3148 | TCONS_00041700-exon-sc0002977-1510915933:3029..3148 | Clytia hemisphaerica | exon |
| TCONS_00041700-exon-sc0002977-1575043694:3029..3148 | TCONS_00041700-exon-sc0002977-1575043694:3029..3148 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002977 | supercontig | sc0002977:2120..3148 + |
Blast
The following BLAST results are available for this feature:
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