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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041693 ID=TCONS_00041693|Name=TCONS_00041693|organism=Clytia hemisphaerica|type=transcript|length=1482bp
GGGTAAGGCATCAGGTTACGCACACAAAGTTATACAAGGACATAAAAAGT
AAAGCCAAGTTCAGTTGTAGGTATACACAGATTATAATCTTATAATACTT
CTAAAGAAGGCAACTTTACTTCCAATTCATCCAACCAGATCGATGAACAC
AATTGGCATTCAGCCATTGAGTGCTAGCTGACATCATACCAGAGATATAT
TTATACGTAGACATaggaccttttacatagttctTCTGTCCTTCTTAtgt
ctttttattcattcagcAGCAGACAGTAGAAAATCAGCATCAAATTTGTT
TAGTCTCTATAGTGTTCGTTAGCAGTATGAAATTCCAATGGCATTTTGCT
TGATCAAaagaacattcttcatattcaatgagaaagaaatcaagaaagtg
ACAAGTGATCCtcttgcatattctgttttgcTTTGGAGAAACAGCTTGGC
TCAAACATTTTGACAGTCTGGTTGTGGCTAGtttgtatttgtttttgttg
aaaaatgatataaacCATCCGTAGTTCGggcaagattttttttcctatcc
gtcattaTGGGACTTTGCTAATCAACATCCGATTCGCGTACACCCCtgaa
atcactttcgttttctatgtgtaccagggcttatatcccccgtcaacgcg
tccatcagaatcatcaatagcgtaagggggttagataagccatggagtcg
agggtggaccttgtagtgcactctatcacggccccttctcacagacccgg
tgggattttatcagccagcTGGGATAAAAATAATCGAAAACTCGATGGGG
ACGATATttaggccaatttttccagtgagaagggttcccagtggatctgt
tctatcaaaagtacatccaaacagtgcatttcgagggtctcaaaaaacct
acccttaagggcggcaatACAAATGCCGTGGGTAGGACCATAAGAGTGCC
CGGGAGATAACTGACCATTAAAGAGACTGATTTAAGTCTTTCGGATTTtt
gcaacccttagagagacttttggaaggtgaaaaaacTGACCTTTTCTTTC
CTTTCCCTTCCCTACACTTAGACGACTTTCTTTCAGTCGAAGTCTTAAAT
GTAGGCTGCGGAAGAATGACGACGAATCTAAATCTGTCCTCTTTAAACTG
TTGAAACAATGATCAAAGTTgaagaaaacaagaaactttgcCTGATTTCC
TCATTCAAGGGTGCAGCAGGGGtgtaaatataatatatttatCAGTTAGT
ATTTGAACGTACCTCTAAGCACCTGGAAGATTCATTCAAGGTAAGTGACG
TTAAATTTTCAGGCTTCCTTAAGAACATTGTTAAGGATAAAAAAGAGAGA
AGGGGGATGAACTGtgagaaaaacgaaaaatttagagggtaaaacttgag
aaaatgtcaccatattttgctttaaaatggacaaattataaagaaaacac
ACTGTAACAGCCGATTTTCtgcccaaatttac Run BLAST on NCBI transcript from alignment at sc0002973:6736..8217 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041693 ID=TCONS_00041693|Name=TCONS_00041693|organism=Clytia hemisphaerica|type=transcript|length=1482bp|location=Sequence derived from alignment at sc0002973:6736..8217 (Clytia hemisphaerica)
gtaaatttgggcaGAAAATCGGCTGTTACAGTgtgttttctttataattt
gtccattttaaagcaaaatatggtgacattttctcaagttttaccctcta
aatttttcgtttttctcaCAGTTCATCCCCCTTCTCTCTTTTTTATCCTT
AACAATGTTCTTAAGGAAGCCTGAAAATTTAACGTCACTTACCTTGAATG
AATCTTCCAGGTGCTTAGAGGTACGTTCAAATACTAACTGataaatatat
tatatttacaCCCCTGCTGCACCCTTGAATGAGGAAATCAGgcaaagttt
cttgttttcttcAACTTTGATCATTGTTTCAACAGTTTAAAGAGGACAGA
TTTAGATTCGTCGTCATTCTTCCGCAGCCTACATTTAAGACTTCGACTGA
AAGAAAGTCGTCTAAGTGTAGGGAAGGGAAAGGAAAGAAAAGGTCAgttt
tttcaccttccaaaagtctctctaagggttgcaaAAATCCGAAAGACTTA
AATCAGTCTCTTTAATGGTCAGTTATCTCCCGGGCACTCTTATGGTCCTA
CCCACGGCATTTGTattgccgcccttaagggtaggttttttgagaccctc
gaaatgcactgtttggatgtacttttgatagaacagatccactgggaacc
cttctcactggaaaaattggcctaaATATCGTCCCCATCGAGTTTTCGAT
TATTTTTATCCCAgctggctgataaaatcccaccgggtctgtgagaaggg
gccgtgatagagtgcactacaaggtccaccctcgactccatggcttatct
aacccccttacgctattgatgattctgatggacgcgttgacgggggatat
aagccctggtacacatagaaaacgaaagtgatttcaGGGGTGTACGCGAA
TCGGATGTTGATTAGCAAAGTCCCAtaatgacggataggaaaaaaaatct
tgccCGAACTACGGATGgtttatatcatttttcaacaaaaacaaatacaa
aCTAGCCACAACCAGACTGTCAAAATGTTTGAGCCAAGCTGTTTCTCCAA
AgcaaaacagaatatgcaagaGGATCACTTGTcactttcttgatttcttt
ctcattgaatatgaagaatgttcttTTGATCAAGCAAAATGCCATTGGAA
TTTCATACTGCTAACGAACACTATAGAGACTAAACAAATTTGATGCTGAT
TTTCTACTGTCTGCTgctgaatgaataaaaagacaTAAGAAGGACAGAag
aactatgtaaaaggtcctATGTCTACGTATAAATATATCTCTGGTATGAT
GTCAGCTAGCACTCAATGGCTGAATGCCAATTGTGTTCATCGATCTGGTT
GGATGAATTGGAAGTAAAGTTGCCTTCTTTAGAAGTATTATAAGATTATA
ATCTGTGTATACCTACAACTGAACTTGGCTTTACTTTTTATGTCCTTGTA
TAACTTTGTGTGCGTAACCTGATGCCTTACCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041693-exon-sc0002973-1491911889:6736..8217 | TCONS_00041693-exon-sc0002973-1491911889:6736..8217 | Clytia hemisphaerica | exon |
| TCONS_00041693-exon-sc0002973-1510915933:6736..8217 | TCONS_00041693-exon-sc0002973-1510915933:6736..8217 | Clytia hemisphaerica | exon |
| TCONS_00041693-exon-sc0002973-1575043694:6736..8217 | TCONS_00041693-exon-sc0002973-1575043694:6736..8217 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002973 | supercontig | sc0002973:6736..8217 . |
Blast
The following BLAST results are available for this feature:
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