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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041691 ID=TCONS_00041691|Name=TCONS_00041691|organism=Clytia hemisphaerica|type=transcript|length=1127bp
AAACCATCGTGTGCATCTTGCGTCACCGAGTAGAGCGTAGATGTTGTTCA
AGCCATCACCAAAATAGAGGTTGTTTTCTATATCGTGAGTCTTGGCCAAG
CTGACCAAGTCCTTGATGGTGTTGATAAGTTGAGTGATGAACGACATAAT
CTTTGTTGGATCCTTAGATTTGGAGACAGAGTCGAGGCTTTTAAGTTCCT
TGAGTTTCTTGGTGAGTAGAACCTTTGTGTTGCCGTACACGTGGATGAGT
CGTTTCCAAATCAAGTTGATATCTGTCATACCCTTGACCAGCGACAGTGC
AGGTTCGGATAGGTAATTGTTGATAAGAAGATCTGCAAGTAGAAGTTTTG
GAGTGTTGCGCAAGCTGATTTTCTCAAAGTCTGATCTGAAGGTGTAAATG
TCTGTGTTGGAATCGTAACCAGAGAATTTTTGCAAGTCGATTCCGAGTTT
GGCTTCGTCGAAAGATTTGAATTTCATTACTTCTCTCGATTCGATTGctg
atttgatttttgaagctatTGAAGACTTCTTGGCTtaattaattttgaaa
gttcGATGTTCATAACAGGAAATTTAATGAGTCTCTCATACCTGTCAGCA
ATGGTGGATAACTTTTTGTCGAAGATTGGTAATTCAGTTTTACATTGCAA
AAGTTCTGAGTCATCAAATTTGGTGATGTCAATATCAAGAGACAATTTTA
GTTCACTAATATGATCTACAATATCATTTGCGGAGAACATCATTGCTTCT
AGTTCGTTTTTAAAATTGGTTGATTCAACAACAGTGTTTGAGAGTGTGGC
GTTGGCCTCGTCGATGTGACTTTTCGCTGCTACAATGAAGTCTTTGATGA
GATCGAATACATTTTGGATTCTCGGCTGTATCGATTTATACTCGTCGGGA
GCTAATTTCGAGAAAGTTTTGACATTTGCACGGAGTCCCTTTCGTAGATC
TTTCAGTTCAGTAAGGATACTTTCGGTGTCTTTGATTGAAGCATTACGGA
TTGAGTGTTCGTCAATTAAGTCAGTTACCTCATCCAAACAAAGTTCAATA
TCAGATTGTAGTATGTATACTTGATTGAGTTGAAGTTTGATGTCTCTCTT
GGCAGACGGTGGTGTCTCGATCAACGG Run BLAST on NCBI protein sequence of TCONS_00041691-protein >TCONS_00041691-protein ID=TCONS_00041691-protein|Name=TCONS_00041691-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
PLIETPPSAKRDIKLQLNQVYILQSDIELCLDEVTDLIDEHSIRNASIKD
TESILTELKDLRKGLRANVKTFSKLAPDEYKSIQPRIQNVFDLIKDFIVA
AKSHIDEANATLSNTVVESTNFKNELEAMMFSANDIVDHISELKLSLDID
ITKFDDSELLQCKTELPIFDKKLSTIADRYERLIKFPVMNIELSKLIKPR
SLQ Run BLAST on NCBI transcript from alignment at sc0002972:8841..9967 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041691 ID=TCONS_00041691|Name=TCONS_00041691|organism=Clytia hemisphaerica|type=transcript|length=1127bp|location=Sequence derived from alignment at sc0002972:8841..9967 (Clytia hemisphaerica)
CCGTTGATCGAGACACCACCGTCTGCCAAGAGAGACATCAAACTTCAACT
CAATCAAGTATACATACTACAATCTGATATTGAACTTTGTTTGGATGAGG
TAACTGACTTAATTGACGAACACTCAATCCGTAATGCTTCAATCAAAGAC
ACCGAAAGTATCCTTACTGAACTGAAAGATCTACGAAAGGGACTCCGTGC
AAATGTCAAAACTTTCTCGAAATTAGCTCCCGACGAGTATAAATCGATAC
AGCCGAGAATCCAAAATGTATTCGATCTCATCAAAGACTTCATTGTAGCA
GCGAAAAGTCACATCGACGAGGCCAACGCCACACTCTCAAACACTGTTGT
TGAATCAACCAATTTTAAAAACGAACTAGAAGCAATGATGTTCTCCGCAA
ATGATATTGTAGATCATATTAGTGAACTAAAATTGTCTCTTGATATTGAC
ATCACCAAATTTGATGACTCAGAACTTTTGCAATGTAAAACTGAATTACC
AATCTTCGACAAAAAGTTATCCACCATTGCTGACAGGTATGAGAGACTCA
TTAAATTTCCTGTTATGAACATCgaactttcaaaattaattaAGCCAAGA
AGTCTTCAatagcttcaaaaatcaaatcagCAATCGAATCGAGAGAAGTA
ATGAAATTCAAATCTTTCGACGAAGCCAAACTCGGAATCGACTTGCAAAA
ATTCTCTGGTTACGATTCCAACACAGACATTTACACCTTCAGATCAGACT
TTGAGAAAATCAGCTTGCGCAACACTCCAAAACTTCTACTTGCAGATCTT
CTTATCAACAATTACCTATCCGAACCTGCACTGTCGCTGGTCAAGGGTAT
GACAGATATCAACTTGATTTGGAAACGACTCATCCACGTGTACGGCAACA
CAAAGGTTCTACTCACCAAGAAACTCAAGGAACTTAAAAGCCTCGACTCT
GTCTCCAAATCTAAGGATCCAACAAAGATTATGTCGTTCATCACTCAACT
TATCAACACCATCAAGGACTTGGTCAGCTTGGCCAAGACTCACGATATAG
AAAACAACCTCTATTTTGGTGATGGCTTGAACAACATCTACGCTCTACTC
GGTGACGCAAGATGCACACGATGGTTT Coding sequence (CDS) from alignment at sc0002972:8841..9967 >TCONS_00041691 ID=TCONS_00041691|Name=TCONS_00041691|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at sc0002972:8841..9967 (Clytia hemisphaerica)
CCGTTGATCGAGACACCACCGTCTGCCAAGAGAGACATCAAACTTCAACT
CAATCAAGTATACATACTACAATCTGATATTGAACTTTGTTTGGATGAGG
TAACTGACTTAATTGACGAACACTCAATCCGTAATGCTTCAATCAAAGAC
ACCGAAAGTATCCTTACTGAACTGAAAGATCTACGAAAGGGACTCCGTGC
AAATGTCAAAACTTTCTCGAAATTAGCTCCCGACGAGTATAAATCGATAC
AGCCGAGAATCCAAAATGTATTCGATCTCATCAAAGACTTCATTGTAGCA
GCGAAAAGTCACATCGACGAGGCCAACGCCACACTCTCAAACACTGTTGT
TGAATCAACCAATTTTAAAAACGAACTAGAAGCAATGATGTTCTCCGCAA
ATGATATTGTAGATCATATTAGTGAACTAAAATTGTCTCTTGATATTGAC
ATCACCAAATTTGATGACTCAGAACTTTTGCAATGTAAAACTGAATTACC
AATCTTCGACAAAAAGTTATCCACCATTGCTGACAGGTATGAGAGACTCA
TTAAATTTCCTGTTATGAACATCgaactttcaaaattaattaAGCCAAGA
AGTCTTCAatag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041691-exon-sc0002972-1491911889:8841..9967 | TCONS_00041691-exon-sc0002972-1491911889:8841..9967 | Clytia hemisphaerica | exon |
| TCONS_00041691-exon-sc0002972-1510915933:8841..9967 | TCONS_00041691-exon-sc0002972-1510915933:8841..9967 | Clytia hemisphaerica | exon |
| TCONS_00041691-exon-sc0002972-1575043694:8841..9967 | TCONS_00041691-exon-sc0002972-1575043694:8841..9967 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002972 | supercontig | sc0002972:8841..9967 . |
Blast
The following BLAST results are available for this feature:
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