TCONS_00041649 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041649
Unique NameTCONS_00041649
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041649 ID=TCONS_00041649|Name=TCONS_00041649|organism=Clytia hemisphaerica|type=transcript|length=105bp
ATTCAAACAAACAGCCGCTTTCAAACAAGCATTCAATCATACAAGCAGTG
ATATCTGAAAAATCTGTGCCAGACGAAGCAGATTACTCAGCAGAAGAAGA
AAGNN
Run BLAST on NCBI

transcript from alignment at sc0002953:376..480

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041649 ID=TCONS_00041649|Name=TCONS_00041649|organism=Clytia hemisphaerica|type=transcript|length=105bp|location=Sequence derived from alignment at sc0002953:376..480 (Clytia hemisphaerica)
NNCTTTCTTCTTCTGCTGAGTAATCTGCTTCGTCTGGCACAGATTTTTCA
GATATCACTGCTTGTATGATTGAATGCTTGTTTGAAAGCGGCTGTTTGTT
TGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025582XLOC_025582Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041649-exon-sc0002953-1491911889:376..480TCONS_00041649-exon-sc0002953-1491911889:376..480Clytia hemisphaericaexon
TCONS_00041649-exon-sc0002953-1510915933:376..480TCONS_00041649-exon-sc0002953-1510915933:376..480Clytia hemisphaericaexon
TCONS_00041649-exon-sc0002953-1575043694:376..480TCONS_00041649-exon-sc0002953-1575043694:376..480Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002953supercontigsc0002953:376..480 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041649 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top