|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041570 ID=TCONS_00041570|Name=TCONS_00041570|organism=Clytia hemisphaerica|type=transcript|length=1349bp
TCTGGTTATTAAAGTCAATTATATCCAATTGTGTTTTAGAATTCATCCAG
AACGCAAAAGGGAAAACTAAAGGGAAAAAGTCTCAGTCCATGAAGACACC
AGACGATCCCAAAAACGGTATGTTATAAAGCTAAAATACTGTGAATTAAT
TGTCTTTGCGATCATGTgatgaaataataaaatgaataacTTGGCTAATA
CCAACCTcgatccctgcgtattatcagctttttgattcttattctctggc
gtcaatcagtaacgtaaataaacctgggatacacggggacgaggttgggc
taatacttcatatattattcagaaaatgaagtcaaaatcgctactttttg
cccatgtcggcatatgccgacattggcaaataggtcgaaccttttttttt
cccgtggcaaataggtcgaaccttaaaaaatacgaacggcagttaaaggg
ttaatctAATACATCAGGTCTAGATGAGGAAAACTTAATTCAATTAATTA
ATATACAAAAANGTTAATCTAATACATCAGGTCTAGATGAGGAAAACTTA
ATTCAATTAATTAATATACAAAAATATTCCTCACACTTCAGGCGAAACGA
GTCAAAGGGTTCAGAATCTTCCGAATGAAGAAATCGTCCTTCCAACATTA
ggtaaaaaatattgttgatcaGTGTATATATCCTCCGAACCCCCATAATA
AAGAATGTTCATAGAGTCTGGCCACGGAATGATTTTTAAGCTTTTGATTT
ATTATGCGACCCGctttaattttactttatacgcttttttaaaaaagatc
tagtctgaatagacgatatcgcatttagataaatgaaatgcattctggtt
tctcggggactctcaaaggaactATAATGTCGATTATATACTGATCtgga
atagattataattcccttgagggtcccgagaaaccagaatgcattgcatt
tatctaaacgcgatatcgtctattaggaTCCTAGCCTCAGAAtgctgtaa
aaatattttaggataatCTTCccggtttttataaaaaatttatgCTTTTA
ATTAAACTAATTAAACCAAACCTTTTTTTAGACGAAGAGGCAATCGTTAA
ACAGAGGATAGAGGAAACTGTAGTTACCACCAAAACCGGTATATATTTTC
GCTTAGTTATAAGACCGCTTTATGAGTGTCAAAAATCAAGGGCTACATGA
CCTACAGGTAGCTAGTTATAAAAAGTgcaacaaacttgtaaaacaatcaa
aagtagccatatttggtttgattttttattttgacatgtgacatttgttt
tgattttgtatccgcatacagtttgtttaaaatttcgcaagtactgttt Run BLAST on NCBI transcript from alignment at sc0002914:14432..15780 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041570 ID=TCONS_00041570|Name=TCONS_00041570|organism=Clytia hemisphaerica|type=transcript|length=1349bp|location=Sequence derived from alignment at sc0002914:14432..15780 (Clytia hemisphaerica)
aaacagtacttgcgaaattttaaacaaactgtatgcggatacaaaatcaa
aacaaatgtcacatgtcaaaataaaaaatcaaaccaaatatggctacttt
tgattgttttacaagtttgttgcACTTTTTATAACTAGCTACCTGTAGGT
CATGTAGCCCTTGATTTTTGACACTCATAAAGCGGTCTTATAACTAAGCG
AAAATATATACCGGTTTTGGTGGTAACTACAGTTTCCTCTATCCTCTGTT
TAACGATTGCCTCTTCGTCTAAAAAAAGGTTTGGTTTAATTAGTTTAATT
AAAAGcataaattttttataaaaaccggGAAGattatcctaaaatatttt
tacagcaTTCTGAGGCTAGGAtcctaatagacgatatcgcgtttagataa
atgcaatgcattctggtttctcgggaccctcaagggaattataatctatt
ccaGATCAGTATATAATCGACATTATagttcctttgagagtccccgagaa
accagaatgcatttcatttatctaaatgcgatatcgtctattcagactag
atcttttttaaaaaagcgtataaagtaaaattaaagCGGGTCGCATAATA
AATCAAAAGCTTAAAAATCATTCCGTGGCCAGACTCTATGAACATTCTTT
ATTATGGGGGTTCGGAGGATATATACACtgatcaacaatattttttaccT
AATGTTGGAAGGACGATTTCTTCATTCGGAAGATTCTGAACCCTTTGACT
CGTTTCGCCTGAAGTGTGAGGAATATTTTTGTATATTAATTAATTGAATT
AAGTTTTCCTCATCTAGACCTGATGTATTAGATTAACNTTTTTGTATATT
AATTAATTGAATTAAGTTTTCCTCATCTAGACCTGATGTATTagattaac
cctttaactgccgttcgtattttttaaggttcgacctatttgccacggga
aaaaaaaaggttcgacctatttgccaatgtcggcatatgccgacatgggc
aaaaagtagcgattttgacttcattttctgaataatatatgaagtattag
cccaacctcgtccccgtgtatcccaggtttatttacgttactgattgacg
ccagagaataagaatcaaaaagctgataatacgcagggatcgAGGTTGGT
ATTAGCCAAgttattcattttattatttcatcACATGATCGCAAAGACAA
TTAATTCACAGTATTTTAGCTTTATAACATACCGTTTTTGGGATCGTCTG
GTGTCTTCATGGACTGAGACTTTTTCCCTTTAGTTTTCCCTTTTGCGTTC
TGGATGAATTCTAAAACACAATTGGATATAATTGACTTTAATAACCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041570-exon-sc0002914-1491911889:14432..15780 | TCONS_00041570-exon-sc0002914-1491911889:14432..15780 | Clytia hemisphaerica | exon |
| TCONS_00041570-exon-sc0002914-1510915933:14432..15780 | TCONS_00041570-exon-sc0002914-1510915933:14432..15780 | Clytia hemisphaerica | exon |
| TCONS_00041570-exon-sc0002914-1575043694:14432..15780 | TCONS_00041570-exon-sc0002914-1575043694:14432..15780 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002914 | supercontig | sc0002914:14432..15780 . |
Blast
The following BLAST results are available for this feature:
|
