TCONS_00041569 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041569
Unique NameTCONS_00041569
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length192

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041569 ID=TCONS_00041569|Name=TCONS_00041569|organism=Clytia hemisphaerica|type=transcript|length=192bp
GTTCGGGTTGTCAGCGCTttataaaatttgtaaattggcCGCTATAGGAT
TTCCCTCACAAAGAGGTTTCACTTACCAGATGACTGGATGAGTGTCATTA
TTGTTGTAGAAGAAGCGCCAAGtaaaattcaatcatcaatAATCAGTCAA
TGTCAATTTCGCTCCCAGTTCAAATTTTTATACTTACTTGGA
Run BLAST on NCBI

transcript from alignment at sc0002914:10148..10339

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041569 ID=TCONS_00041569|Name=TCONS_00041569|organism=Clytia hemisphaerica|type=transcript|length=192bp|location=Sequence derived from alignment at sc0002914:10148..10339 (Clytia hemisphaerica)
TCCAAGTAAGTATAAAAATTTGAACTGGGAGCGAAATTGACATTGACTGA
TTattgatgattgaattttaCTTGGCGCTTCTTCTACAACAATAATGACA
CTCATCCAGTCATCTGGTAAGTGAAACCTCTTTGTGAGGGAAATCCTATA
GCGgccaatttacaaattttataaAGCGCTGACAACCCGAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025511XLOC_025511Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041569-exon-sc0002914-1491911889:10148..10339TCONS_00041569-exon-sc0002914-1491911889:10148..10339Clytia hemisphaericaexon
TCONS_00041569-exon-sc0002914-1510915933:10148..10339TCONS_00041569-exon-sc0002914-1510915933:10148..10339Clytia hemisphaericaexon
TCONS_00041569-exon-sc0002914-1575043694:10148..10339TCONS_00041569-exon-sc0002914-1575043694:10148..10339Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002914supercontigsc0002914:10148..10339 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041569 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top