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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041556 ID=TCONS_00041556|Name=TCONS_00041556|organism=Clytia hemisphaerica|type=transcript|length=1071bp
AATGTCCCATACGAAAACTAATCATGTTAATAACAAGACTGGTGTCATAA
AAGTGCCtcaaaagaaatcaataaaatcattcGTCGTTAAACTGTAATCA
TCAATTGTACGATCAGGGGGTCAAGGATTGTTCAAGtgcctttcttttat
aagaacaatttaattgAAATAAGTTCCACAATTCGTTGGATTTACGGAAA
AATAATGACTAAAAGATAGGACGGATAAAAAAAAGCAACCCTTCAGGAAT
GAGGAGTAAATATCAGAGCCAATTTTGTAAGAGTATAAGAAATGCAAGAA
TAGGATACGAGCTtcggaaaagaaaaacacaccCTGTGCGtgctaatttt
gaatttttcttaagaacttttttaatcaaaagtgattatttttcCGTCAA
ACCTGTTCCGTATTTAGTTAagatacaggggtgtaaaagaAAGTATATGT
AACACTGTATATGGACGTTTCGTCGATCGATATAGATTGTGAGACAGGGG
TGTGCAAAGTCAACGTCAAATGAGCGTTATGAGTATTCTGATGAATATTC
CGGTATCTCGTCAATGGGAACCAGAGAAGGAGTAGCGTATTAGACAATCA
TTTCTCAGTCTAAGAGGTGTCACTCTTTGCGAACGCAGAAATTCGGGCAG
ACAGTGACGGGATACAtggtaaaaagtaaatattCGTTTTCTTCTCGAAT
TTTCACAAATCTCCATACGGTAAATCATGTCATGCCGAAACANTCTtctc
gaatttttacaaatctccATACGGTAAATCATGTCATGCCGAAACACCTG
CCTCaaagccccggtggaattttttcctaCAACGGGGCCAgtaatttcta
tcaaaatcttTATGGGGataggaattctattgttccaagctttaaaatac
acaatgaagatggttttggagtgcaattttttatatTGGAtggatttcga
atggggatgaaatcaagaTCAATTTTTTCCGAGGGGGCATTTTGGTATTT
CTTCCAACGgggacgaattttttttgtatctATTCAACGATTCGATGCAA
AAATTAGATTCTGTAATTTAT Run BLAST on NCBI transcript from alignment at sc0002909:7659..8729 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041556 ID=TCONS_00041556|Name=TCONS_00041556|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at sc0002909:7659..8729 (Clytia hemisphaerica)
ATAAATTACAGAATCTAATTTTTGCATCGAATCGTTGAATagatacaaaa
aaaattcgtcccCGTTGGAAGAAATACCAAAATGCCCCCTCGGAAAAAAT
TGAtcttgatttcatccccattcgaaatccaTCCAatataaaaaattgca
ctccaaaaccatcttcattgtgtattttaaagcttggaacaatagaattc
ctatCCCCATAaagattttgatagaaattacTGGCCCCGTTGtaggaaaa
aattccaccggggctttGAGGCAGGTGTTTCGGCATGACATGATTTACCG
TATggagatttgtaaaaattcgagaAGANTGTTTCGGCATGACATGATTT
ACCGTATGGAGATTTGTGAAAATTCGAGAAGAAAACGaatatttactttt
taccaTGTATCCCGTCACTGTCTGCCCGAATTTCTGCGTTCGCAAAGAGT
GACACCTCTTAGACTGAGAAATGATTGTCTAATACGCTACTCCTTCTCTG
GTTCCCATTGACGAGATACCGGAATATTCATCAGAATACTCATAACGCTC
ATTTGACGTTGACTTTGCACACCCCTGTCTCACAATCTATATCGATCGAC
GAAACGTCCATATACAGTGTTACATATACTTtcttttacacccctgtatc
tTAACTAAATACGGAACAGGTTTGACGgaaaaataatcacttttgattaa
aaaagttcttaagaaaaattcaaaattagcaCGCACAGggtgtgtttttc
ttttccgaAGCTCGTATCCTATTCTTGCATTTCTTATACTCTTACAAAAT
TGGCTCTGATATTTACTCCTCATTCCTGAAGGGTTGCTTTTTTTTATCCG
TCCTATCTTTTAGTCATTATTTTTCCGTAAATCCAACGAATTGTGGAACT
TATTTcaattaaattgttcttataaaagaaaggcaCTTGAACAATCCTTG
ACCCCCTGATCGTACAATTGATGATTACAGTTTAACGACgaatgatttta
ttgatttcttttgaGGCACTTTTATGACACCAGTCTTGTTATTAACATGA
TTAGTTTTCGTATGGGACATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041556-exon-sc0002909-1491911889:7659..8729 | TCONS_00041556-exon-sc0002909-1491911889:7659..8729 | Clytia hemisphaerica | exon |
| TCONS_00041556-exon-sc0002909-1510915933:7659..8729 | TCONS_00041556-exon-sc0002909-1510915933:7659..8729 | Clytia hemisphaerica | exon |
| TCONS_00041556-exon-sc0002909-1575043694:7659..8729 | TCONS_00041556-exon-sc0002909-1575043694:7659..8729 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002909 | supercontig | sc0002909:7659..8729 . |
Blast
The following BLAST results are available for this feature:
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