|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041549 ID=TCONS_00041549|Name=TCONS_00041549|organism=Clytia hemisphaerica|type=transcript|length=981bp
ttttatgaTATAGAAAAGAAGGGCGCCTCTTATGCTGACAACGCAGAATT
AATAAGATTTGTGCTCGCACGGCGCCGCAAGGGGAGAGAGTTgctcttcc
ttttatttacaactGTTTGGTAAGCAAATGGTAGATGTGTTGTGTGATTT
ACTTTTAAGTAAAAATGCTAAGCCAACAGATTACCCTTATACTACTTCAC
AAATTTCTTTACAACATTTTTGTTGGCAATTTCTAataacaagttggtca
aatccATAAAAATATCAAGATGCACAAATCATCGAAAAACAATAACCATT
ACTGACCATGCACTTTCAGTAGTAGATCCTCTTAGATAGGTTAACAAATT
ACATAGAGCATTTGTAAGGTCTTCAAACCTGTCGAGGACTAATAAAccat
atcaaaattttccatttgAAGAAAGCAACTAGCTTCGTTCTCGAATCCAA
GCTTTATAGTCTGGATAATGGGCAAACCTTTAAGAAATaatgtgactgaa
atttggcacagaggtTTCTGATGGGTCCTAGAACCTCGAGAAAAAACCCA
CGATCGAATCAAGAGTTTTGTTCCTTTTTTGAGGTGTTTTATatgatgac
gtcacttttcagaaaaaagcttaaaaaataaaaaggccttttcgaaaatt
attttgagtgctacgactgcctcgttttgaaatcatGTAAGGTAGATAAC
TAAAATGGGGTCTAATTAAAGTTTTGTCAATTAGACCCCCTAAATGGACC
GAAAGAACTGAAAATCCATCCCAATTCTGGGTGTTNTTAAACCCCCTAAA
ATGGACCGAAAGGACTGAACATCCATCACATTTCTGGGTGCCCAGTTTAC
AGCTGTCCAGTaagatttgattttaaaaacaagCTCAACAGATGGGCCTT
GAAATGGTATTGTTCACATGGTTTCGAAGACTAGATTACAAGATATTCAG
GTTTTAGGATCGATGATTTTTTTACCTTTCT Run BLAST on NCBI transcript from alignment at sc0002905:11732..12712 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041549 ID=TCONS_00041549|Name=TCONS_00041549|organism=Clytia hemisphaerica|type=transcript|length=981bp|location=Sequence derived from alignment at sc0002905:11732..12712 (Clytia hemisphaerica)
AGAAAGGTAAAAAAATCATCGATCCTAAAACCTGAATATCTTGTAATCTA
GTCTTCGAAACCATGTGAACAATACCATTTCAAGGCCCATCTGTTGAGct
tgtttttaaaatcaaatcttACTGGACAGCTGTAAACTGGGCACCCAGAA
ATGTGATGGATGTTCAGTCCTTTCGGTCCATTTTAGGGGGTTTAANAACA
CCCAGAATTGGGATGGATTTTCAGTTCTTTCGGTCCATTTAGGGGGTCTA
ATTGACAAAACTTTAATTAGACCCCATTTTAGTTATCTACCTTACatgat
ttcaaaacgaggcagtcgtagcactcaaaataattttcgaaaaggccttt
ttattttttaagcttttttctgaaaagtgacgtcatcatATAAAACACCT
CAAAAAAGGAACAAAACTCTTGATTCGATCGTGGGTTTTTTCTCGAGGTT
CTAGGACCCATCAGAAacctctgtgccaaatttcagtcacattATTTCTT
AAAGGTTTGCCCATTATCCAGACTATAAAGCTTGGATTCGAGAACGAAGC
TAGTTGCTTTCTTcaaatggaaaattttgatatggTTTATTAGTCCTCGA
CAGGTTTGAAGACCTTACAAATGCTCTATGTAATTTGTTAACCTATCTAA
GAGGATCTACTACTGAAAGTGCATGGTCAGTAATGGTTATTGTTTTTCGA
TGATTTGTGCATCTTGATATTTTTATggatttgaccaacttgttatTAGA
AATTGCCAACAAAAATGTTGTAAAGAAATTTGTGAAGTAGTATAAGGGTA
ATCTGTTGGCTTAGCATTTTTACTTAAAAGTAAATCACACAACACATCTA
CCATTTGCTTACCAAACagttgtaaataaaaggaagagcAACTCTCTCCC
CTTGCGGCGCCGTGCGAGCACAAATCTTATTAATTCTGCGTTGTCAGCAT
AAGAGGCGCCCTTCTTTTCTATAtcataaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041549-exon-sc0002905-1491911889:11732..12712 | TCONS_00041549-exon-sc0002905-1491911889:11732..12712 | Clytia hemisphaerica | exon |
| TCONS_00041549-exon-sc0002905-1510915933:11732..12712 | TCONS_00041549-exon-sc0002905-1510915933:11732..12712 | Clytia hemisphaerica | exon |
| TCONS_00041549-exon-sc0002905-1575043694:11732..12712 | TCONS_00041549-exon-sc0002905-1575043694:11732..12712 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002905 | supercontig | sc0002905:11732..12712 . |
Blast
The following BLAST results are available for this feature:
|
