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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041540 ID=TCONS_00041540|Name=TCONS_00041540|organism=Clytia hemisphaerica|type=transcript|length=1581bp
CATAACTTTGATCAACTTGGATCGATTCCGCCCTCACAGAACGCTCAaca
attattcaaaaataatccccaaaattttcaaaagacactaaaattcCTTT
CAATGTTACTCAAATCAGTCTTTCATGGTTAGCTTCTCAAATTCCATcat
ctcaaaatttttgtttttaataccCTTAGAAATGTAGATcataactttta
tcaactcggaTCGATTCCGCCCTCACAGAACGCTCACCAagtattcaaaa
ataatcaccaaaattttcaaaagacattaaAATTCCTTTCAATGTTATTC
AAATCAGTCTTTTATGGTTAGCTACTCAAATTCGATTATATCAGTTTTTA
ATTCCATTTTAACACCCTTAGAAATCTAGATCATAACTTTGATCAACTTG
GATCGATTCCGCCCTCACAGAACGCTCAACAAGTATTCAAAAATAAtccc
caaaattttcaaaagacactaaaattcCTTTCAATGTTATTCAAATCAGT
CTTTCATGGTTAGCTTCTCAAATTCCATcatctcaaaatttttgttttta
acacCCTTAGAAATGTAGATcataacttttatcaactcggatcgattccg
ccctcacagaacgctcacaagtattcaaaaataatcaccaaaattttcaa
aagacactaaaattcCTTTCAATGTTATTCAAATCAGTCTTTCATGGTTA
GCTTCTCAAATTCCATcatctcaaaatttttgtttttaacacCCTTAGAA
ATGTAGATcataacttttatcaactcggatcgattccgccctcacagaac
gctcacaagtattcaaaaataatcaccaaaattttcaaaagacattaaAA
TTCCTTTCAATGTTATTCAAATCAGTCTTTTATGGTTAGCTACTCAGATT
CGATTATATCAGTTTTTAATTCCATTTTAACACCCTTAGAAATCTAGATC
ATAACTTTGATCAGCTTGGATCGATTCCGCCCTCACAGAACGCTCACAAG
TATTCAAAAGtaatcaccaaaattttcaaaagacattaaAATTCCTTTCA
ATGTTATTCAAATCAGTCTTTTATGGTTAGCTACTCAAATTCgatcatat
caatttttaattcCATTTTAACACCCTTAGAAATCTAGATCATAACTTTG
ATCAGCTTGGATCGATTCCGCCCTCACAGAACGCTCACAAGTATTCAAAA
GtaatcaccaaaattttcaaaagacactaaaattcCTTTCAATGTTAATT
AAGTCAGTTCTTCATGGTTAGCTATTCAAATTCGATCATATCAGTTTTTA
ATTCCATTTTAACACCCTAAAAATCTAGATcataacttttatcaactcgg
aTCGATTCCGCCCTTACAGAACGCTCACAAGTATTCAAAAATAAacccca
aatttttcaaaagacactaaaattcCTTTCATTGTTATTCAAATCAGTCT
TTCATGGTTAGCTATTCAAATTCgattatatcaatttttaattCCATTTT
AACACCCTTAGAAACCTAGATCATAATTTTTATCAACTTGGATCGATTCC
GCCCTCACAGAACGCTCGCAagtattcaaaa Run BLAST on NCBI transcript from alignment at sc0002903:9500..11080 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041540 ID=TCONS_00041540|Name=TCONS_00041540|organism=Clytia hemisphaerica|type=transcript|length=1581bp|location=Sequence derived from alignment at sc0002903:9500..11080 (Clytia hemisphaerica)
ttttgaatactTGCGAGCGTTCTGTGAGGGCGGAATCGATCCAAGTTGAT
AAAAATTATGATCTAGGTTTCTAAGGGTGTTAAAATGGaattaaaaattg
atataatcGAATTTGAATAGCTAACCATGAAAGACTGATTTGAATAACAA
TGAAAGgaattttagtgtcttttgaaaaatttggggtTTATTTTTGAATA
CTTGTGAGCGTTCTGTAAGGGCGGAATCGAtccgagttgataaaagttat
gATCTAGATTTTTAGGGTGTTAAAATGGAATTAAAAACTGATATGATCGA
ATTTGAATAGCTAACCATGAAGAACTGACTTAATTAACATTGAAAGgaat
tttagtgtcttttgaaaattttggtgattaCTTTTGAATACTTGTGAGCG
TTCTGTGAGGGCGGAATCGATCCAAGCTGATCAAAGTTATGATCTAGATT
TCTAAGGGTGTTAAAATGgaattaaaaattgatatgatcGAATTTGAGTA
GCTAACCATAAAAGACTGATTTGAATAACATTGAAAGGAATTttaatgtc
ttttgaaaattttggtgattaCTTTTGAATACTTGTGAGCGTTCTGTGAG
GGCGGAATCGATCCAAGCTGATCAAAGTTATGATCTAGATTTCTAAGGGT
GTTAAAATGGAATTAAAAACTGATATAATCGAATCTGAGTAGCTAACCAT
AAAAGACTGATTTGAATAACATTGAAAGGAATTttaatgtcttttgaaaa
ttttggtgattatttttgaatacttgtgagcgttctgtgagggcggaatc
gatccgagttgataaaagttatgATCTACATTTCTAAGGgtgttaaaaac
aaaaattttgagatgATGGAATTTGAGAAGCTAACCATGAAAGACTGATT
TGAATAACATTGAAAGgaattttagtgtcttttgaaaattttggtgatta
tttttgaatacttgtgagcgttctgtgagggcggaatcgatccgagttga
taaaagttatgATCTACATTTCTAAGGgtgttaaaaacaaaaattttgag
atgATGGAATTTGAGAAGCTAACCATGAAAGACTGATTTGAATAACATTG
AAAGgaattttagtgtcttttgaaaattttggggaTTATTTTTGAATACT
TGTTGAGCGTTCTGTGAGGGCGGAATCGATCCAAGTTGATCAAAGTTATG
ATCTAGATTTCTAAGGGTGTTAAAATGGAATTAAAAACTGATATAATCGA
ATTTGAGTAGCTAACCATAAAAGACTGATTTGAATAACATTGAAAGGAAT
TttaatgtcttttgaaaattttggtgattatttttgaatactTGGTGAGC
GTTCTGTGAGGGCGGAATCGAtccgagttgataaaagttatgATCTACAT
TTCTAAGggtattaaaaacaaaaattttgagatgATGGAATTTGAGAAGC
TAACCATGAAAGACTGATTTGAGTAACATTGAAAGgaattttagtgtctt
ttgaaaattttggggattatttttgaataattgtTGAGCGTTCTGTGAGG
GCGGAATCGATCCAAGTTGATCAAAGTTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041540-exon-sc0002903-1491911889:9500..11080 | TCONS_00041540-exon-sc0002903-1491911889:9500..11080 | Clytia hemisphaerica | exon |
| TCONS_00041540-exon-sc0002903-1510915933:9500..11080 | TCONS_00041540-exon-sc0002903-1510915933:9500..11080 | Clytia hemisphaerica | exon |
| TCONS_00041540-exon-sc0002903-1575043694:9500..11080 | TCONS_00041540-exon-sc0002903-1575043694:9500..11080 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002903 | supercontig | sc0002903:9500..11080 . |
Blast
The following BLAST results are available for this feature:
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