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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041514 ID=TCONS_00041514|Name=TCONS_00041514|organism=Clytia hemisphaerica|type=transcript|length=704bp
atgactATTTTTCAGTGCAAAACTTGTAAGGAAGGCTGGCCACTTTGTAA
GACTCCAAATGATAAAAGTAATTATGAATGCGTACGATGTAAAAGAGATA
AAACTCAGCCAANATGGGAAGTACTTGCTTATCTCTGACCGTGGTTATGG
TAAGAGATGAAAGGTTCAACATGATTCTCTTTTATCAGAAGTTAAAGACA
AATTATGAACTTttagtcaaaatatttaaatatattaGTTAAGAGGAAAG
TCAAATTaatttctatcattgttgatCTCTCATGCATATAATACTGACCG
TGTTTTATGGGAAGTAGTTGCTTATCTCTGACCGTGGTTATGGTAAGAGA
TGAAAGACTCAACATGGTTCTCCATTGCCATTAAATTTAATgacttttat
aaatctatttattatctatttattttctatttctggCCCATTTCTGTTTG
TTTTAAAGTGTGTACTATCCACTTGGGAAATTGTTTCTTTGCattaaaaa
gaaagcaaaaggaCAGTATAGATTATTAAATGACATGTGCATGGATTTtc
actcaaaatttcaaaaaatctgaaaacaagttttaatttcatttcttcAG
GTTGGGATGTTCAAGAGAAAACTCACTATAATGGATTCTACTTTCAGGCA
GAAAGAACTAATGGAAAAACTATATGGTTGACCCTTTCCTCAAGACACCT
TANN Run BLAST on NCBI transcript from alignment at sc0002897:7652..9149- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041514 ID=TCONS_00041514|Name=TCONS_00041514|organism=Clytia hemisphaerica|type=transcript|length=1498bp|location=Sequence derived from alignment at sc0002897:7652..9149- (Clytia hemisphaerica)
ATGACTATTTTTCAGTGCAAAACTTGTAAGGAAGGCTGGCCACTTTGTAA
GACTCCAAATGATAAAAGTAATTATGAATGCGTACGATGTAAAAGAGATA
AAACTCAGCCAANATGGGAAGTACTTGCTTATCTCTGACCGTGGTTATGG
TAAGAGATGAAAGGTTCAACATGATTCTCTTTTATCAGAAGTTAAAGACA
AATTGTGAACTTTTAGTCAAAATATTTAAATATATTAGTTAAGAGGAAAG
TGAATTGACTTCTATCATTGTTGATCTCTCATGCATATAATACTGACCGT
GTTTTATGGGAAGTAGTTACTTATCTCTCACCGTGGTTATGGTAAGAGAT
GAAAGGTTCAACATGATTCTCTTTTATCAGAAGTTAAAGACAAATTATGA
ACTTTTAGTCAAAATATTTAAATATATTAGTTAAGAGGAAAGTCAAATTA
ATTTCTATCATTGTTGATCTCTCATGCATATAATACTGACCGTGTTTTAT
GGGAAGTAGTTGCTTATCTCTGACCGTGGTTATGGTAAGAGATGAAAGAC
TCAACATGGTTCTCCATTGCCATTAAATTTAATGACTTTTATAAATCTAT
TTATTATCTATTTATTTTCTATTTCTGGCCCATTTCTGTTTGTTTTAAAG
TGTGTACTATCCACTTGGGAAATTGTTTCTTTGCATTAAAAAGAAAGCAA
AAGGACAGTATAGATTATTAAATGACATGTGCATGGATTTTCACTCAAAA
TTTCAAAAAATCTGAAAACAAGTTTTAATTTCATTTCTTCAGGTTGGGAT
GTTCAAGAGAAAACTCACTATAATGGATTCTACTTTCAGGCAGAAAGAAC
TAATGGTAAGCAAAAGAAACACTTTTCATATTTTGTATCTTGGATCTGAG
CTGCCAAATTTTATGTCCCATCTGTACAGTACACTACAATCATGGACAAA
AGGTTGTAGACAAATGAAATTTTAGTGAAAAATAATGAGAAATAGAGCAA
AATGACACTTCAATGTGTCTGAGAGGGGAGGGATGTTAAGAAAAATACTT
TTGAAGTCGTTGCATTGCTTTTGAGGGAACCACAAGCAAAAAATCAGCGT
TTTGATACTGGTGTAAGCCAGTTAATCAAGCCCTTGTGGTTAGCCNGGAA
CCACAAGCAAAAAATCAGCGTTTTGATACTGGTGTAAGCCAGTTAATCAA
GCCCTTGTGGTTAGACTGTAGTGGGTGACTTTGAATGAACAGCTTTGGAT
GGGTTAAGAAAGCACCCAGAACCTCTTGGGAACTTGTTTTTGATCAATAT
TTAAGTATTTTAGAAATATTGCAGAAGTCTACAAACCTTTTGTCCGTGAC
TGTACAAGACATTTTAAACCTAACTTCGTAAATCATACAAACTAGCCAAT
CATTGGGCTGTTAGTAAAATGTTTCAATTATAATAAATGTTTTACTTCCA
TTTTCAGGAAAAACTATATGGTTGACCCTTTCCTCAAGACACCTTANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041514-exon-sc0002897-1575043694:8980..9149 | TCONS_00041514-exon-sc0002897-1575043694:8980..9149 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1575043694:8295..8787 | TCONS_00041514-exon-sc0002897-1575043694:8295..8787 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1575043694:7652..7692 | TCONS_00041514-exon-sc0002897-1575043694:7652..7692 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1510915933:8980..9149 | TCONS_00041514-exon-sc0002897-1510915933:8980..9149 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1510915933:8295..8787 | TCONS_00041514-exon-sc0002897-1510915933:8295..8787 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1510915933:7652..7692 | TCONS_00041514-exon-sc0002897-1510915933:7652..7692 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1491911889:8980..9149 | TCONS_00041514-exon-sc0002897-1491911889:8980..9149 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1491911889:8295..8787 | TCONS_00041514-exon-sc0002897-1491911889:8295..8787 | Clytia hemisphaerica | exon |
| TCONS_00041514-exon-sc0002897-1491911889:7652..7692 | TCONS_00041514-exon-sc0002897-1491911889:7652..7692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002897 | supercontig | sc0002897:7652..9149 - |
Blast
The following BLAST results are available for this feature:
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