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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041513 ID=TCONS_00041513|Name=TCONS_00041513|organism=Clytia hemisphaerica|type=transcript|length=249bp
ctATTTTTCAGTGCAAAACTTGTAAGGAAGGCTGGCCACTTTGTAAGACT
CCAAATGATAAAAGTAATTATGAATGCGTACGATGTAAAAGAGATAAAAC
TCAGCCAANATGGGAAGTACTTGCTTATCTCTGACCGTGGTTATGGTTGG
GATGTTCAAGAGAAAACTCACTATAATGGATTCTACTTTCAGGCAGAAAG
AACTAATGGAAAAACTATATGGTTGACCCTTTCCTCAAGACACCTTANN Run BLAST on NCBI transcript from alignment at sc0002897:7652..9145- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041513 ID=TCONS_00041513|Name=TCONS_00041513|organism=Clytia hemisphaerica|type=transcript|length=1494bp|location=Sequence derived from alignment at sc0002897:7652..9145- (Clytia hemisphaerica)
CTATTTTTCAGTGCAAAACTTGTAAGGAAGGCTGGCCACTTTGTAAGACT
CCAAATGATAAAAGTAATTATGAATGCGTACGATGTAAAAGAGATAAAAC
TCAGCCAANATGGGAAGTACTTGCTTATCTCTGACCGTGGTTATGGTAAG
AGATGAAAGGTTCAACATGATTCTCTTTTATCAGAAGTTAAAGACAAATT
GTGAACTTTTAGTCAAAATATTTAAATATATTAGTTAAGAGGAAAGTGAA
TTGACTTCTATCATTGTTGATCTCTCATGCATATAATACTGACCGTGTTT
TATGGGAAGTAGTTACTTATCTCTCACCGTGGTTATGGTAAGAGATGAAA
GGTTCAACATGATTCTCTTTTATCAGAAGTTAAAGACAAATTATGAACTT
TTAGTCAAAATATTTAAATATATTAGTTAAGAGGAAAGTCAAATTAATTT
CTATCATTGTTGATCTCTCATGCATATAATACTGACCGTGTTTTATGGGA
AGTAGTTGCTTATCTCTGACCGTGGTTATGGTAAGAGATGAAAGACTCAA
CATGGTTCTCCATTGCCATTAAATTTAATGACTTTTATAAATCTATTTAT
TATCTATTTATTTTCTATTTCTGGCCCATTTCTGTTTGTTTTAAAGTGTG
TACTATCCACTTGGGAAATTGTTTCTTTGCATTAAAAAGAAAGCAAAAGG
ACAGTATAGATTATTAAATGACATGTGCATGGATTTTCACTCAAAATTTC
AAAAAATCTGAAAACAAGTTTTAATTTCATTTCTTCAGGTTGGGATGTTC
AAGAGAAAACTCACTATAATGGATTCTACTTTCAGGCAGAAAGAACTAAT
GGTAAGCAAAAGAAACACTTTTCATATTTTGTATCTTGGATCTGAGCTGC
CAAATTTTATGTCCCATCTGTACAGTACACTACAATCATGGACAAAAGGT
TGTAGACAAATGAAATTTTAGTGAAAAATAATGAGAAATAGAGCAAAATG
ACACTTCAATGTGTCTGAGAGGGGAGGGATGTTAAGAAAAATACTTTTGA
AGTCGTTGCATTGCTTTTGAGGGAACCACAAGCAAAAAATCAGCGTTTTG
ATACTGGTGTAAGCCAGTTAATCAAGCCCTTGTGGTTAGCCNGGAACCAC
AAGCAAAAAATCAGCGTTTTGATACTGGTGTAAGCCAGTTAATCAAGCCC
TTGTGGTTAGACTGTAGTGGGTGACTTTGAATGAACAGCTTTGGATGGGT
TAAGAAAGCACCCAGAACCTCTTGGGAACTTGTTTTTGATCAATATTTAA
GTATTTTAGAAATATTGCAGAAGTCTACAAACCTTTTGTCCGTGACTGTA
CAAGACATTTTAAACCTAACTTCGTAAATCATACAAACTAGCCAATCATT
GGGCTGTTAGTAAAATGTTTCAATTATAATAAATGTTTTACTTCCATTTT
CAGGAAAAACTATATGGTTGACCCTTTCCTCAAGACACCTTANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041513-exon-sc0002897-1575043694:9001..9145 | TCONS_00041513-exon-sc0002897-1575043694:9001..9145 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1575043694:8295..8357 | TCONS_00041513-exon-sc0002897-1575043694:8295..8357 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1575043694:7652..7692 | TCONS_00041513-exon-sc0002897-1575043694:7652..7692 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1510915933:9001..9145 | TCONS_00041513-exon-sc0002897-1510915933:9001..9145 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1510915933:8295..8357 | TCONS_00041513-exon-sc0002897-1510915933:8295..8357 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1510915933:7652..7692 | TCONS_00041513-exon-sc0002897-1510915933:7652..7692 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1491911889:9001..9145 | TCONS_00041513-exon-sc0002897-1491911889:9001..9145 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1491911889:8295..8357 | TCONS_00041513-exon-sc0002897-1491911889:8295..8357 | Clytia hemisphaerica | exon |
| TCONS_00041513-exon-sc0002897-1491911889:7652..7692 | TCONS_00041513-exon-sc0002897-1491911889:7652..7692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002897 | supercontig | sc0002897:7652..9145 - |
Blast
The following BLAST results are available for this feature:
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