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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041512 ID=TCONS_00041512|Name=TCONS_00041512|organism=Clytia hemisphaerica|type=transcript|length=781bp
GCTCGATTTGAAATACATGTCACAAACACAATTCAATGATGCTTCTACAT
GACACTTCCTAAATGTCATTTTCAAGCTTATCAACAAAAcgaaaaaatga
tttcaataatCAACCTTCGTATCGTTATTTCACAATTTGACCTCTAGCAT
GTTCCGTCAATTCGATGCTATTTGNAGTTATTTCACAATTTGACCTCTAG
CATGTTCAGTCAATTCGATGCTATTTGTTCAACCATTTTCCTTGATGTTC
CCGATGCGTGTATTAATTCAGATCAGTTATTTATATCGACTACATGATTA
CAAGTACAACGGGTTATGAATAATTTACATTCAACAAATAAACCTAAACG
TTATCAATTCGCAGCAGTTATATATTGACTACATGAATGCTGTATTTCTA
TCTACAACATATTACGAATAGGTTAGATTCAACAAAACCTAAACGTTATA
AATGTTGTTGACTTCGGATATACACAAAGTTGCTGATACAATGATGCTTA
TTTCCCTGATAGTAGACTGGTGTTTTTGGTCTTTAACTATTTTAAATGTC
ATACCATACAACGTGGTAGTTGGAAATTGAATTGTGTTGAGACGGACTTA
TCAATATTTTACAGCAGGAAGCatatttttataaagacttCTTTCCATTT
TAAACGATAATANTGGTGGTTGGTTGGTAGTTGGAAATTGAATTGTGTTG
AGACGGActtatcaatattttaaagcAGGAAGCATATTTTTATAGAGACT
TCTTTCCATTTTAAACGATAatattttatta Run BLAST on NCBI transcript from alignment at sc0002897:3681..4741- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041512 ID=TCONS_00041512|Name=TCONS_00041512|organism=Clytia hemisphaerica|type=transcript|length=1061bp|location=Sequence derived from alignment at sc0002897:3681..4741- (Clytia hemisphaerica)
GCTCGATTTGAAATACATGTCACAAACACAATTCAATGATGCTTCTACAT
GACACTTCCTAAATGTAAGAGTGGTATTTTAGTTGTCGTGAGTGTTTTTT
CAGTGCAACAGTATAATTAGTAGAGTTATGTCTTATGTTATAGTGGTACT
ACTTTTTTCACGTTACATGGCAACAGAAGTCGCCCAAAGCTACACCTCTC
AAATTTGGAGCCTTTTTAGGTGAGGAACCAGAATCAATCAAAACATCCCT
TTGAACAGGCTTAATCTAGCAGAAAGGTTTATAGTGACATAATGGCTCAT
TTTTTAACAATTTTAAATGATTTGATTTTTTTCTCCGTTTTTAGGTCATT
TTCAAGCTTATCAACAAAACGAAAAAATGATTTCAATAATCAACCTTCGT
ATCGTTATTTCACAATTTGACCTCTAGCATGTTCCGTCAATTCGATGCTA
TTTGNAGTTATTTCACAATTTGACCTCTAGCATGTTCAGTCAATTCGATG
CTATTTGTTCAACCATTTTCCTTGATGTTCCCGATGCGTGTATTAATTCA
GATCAGTTATTTATATCGACTACATGATTACAAGTACAACGGGTTATGAA
TAATTTACATTCAACAAATAAACCTAAACGTTATCAATTCGCAGCAGTTA
TATATTGACTACATGAATGCTGTATTTCTATCTACAACATATTACGAATA
GGTTAGATTCAACAAAACCTAAACGTTATAAATGTTGTTGACTTCGGATA
TACACAAAGTTGCTGATACAATGATGCTTATTTCCCTGATAGTAGACTGG
TGTTTTTGGTCTTTAACTATTTTAAATGTCATACCATACAACGTGGTAGT
TGGAAATTGAATTGTGTTGAGACGGACTTATCAATATTTTACAGCAGGAA
GCATATTTTTATAAAGACTTCTTTCCATTTTAAACGATAATANTGGTGGT
TGGTTGGTAGTTGGAAATTGAATTGTGTTGAGACGGACTTATCAATATTT
TAAAGCAGGAAGCATATTTTTATAGAGACTTCTTTCCATTTTAAACGATA
ATATTTTATTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041512-exon-sc0002897-1575043694:4678..4741 | TCONS_00041512-exon-sc0002897-1575043694:4678..4741 | Clytia hemisphaerica | exon |
| TCONS_00041512-exon-sc0002897-1575043694:3681..4397 | TCONS_00041512-exon-sc0002897-1575043694:3681..4397 | Clytia hemisphaerica | exon |
| TCONS_00041512-exon-sc0002897-1510915933:4678..4741 | TCONS_00041512-exon-sc0002897-1510915933:4678..4741 | Clytia hemisphaerica | exon |
| TCONS_00041512-exon-sc0002897-1510915933:3681..4397 | TCONS_00041512-exon-sc0002897-1510915933:3681..4397 | Clytia hemisphaerica | exon |
| TCONS_00041512-exon-sc0002897-1491911889:4678..4741 | TCONS_00041512-exon-sc0002897-1491911889:4678..4741 | Clytia hemisphaerica | exon |
| TCONS_00041512-exon-sc0002897-1491911889:3681..4397 | TCONS_00041512-exon-sc0002897-1491911889:3681..4397 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002897 | supercontig | sc0002897:3681..4741 - |
Blast
The following BLAST results are available for this feature:
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