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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041442 ID=TCONS_00041442|Name=TCONS_00041442|organism=Clytia hemisphaerica|type=transcript|length=1370bp
CTAGCGCTATCAAAATCGTAGATAAGCTGGTGATACAACACGGGCGGGAA
GAAAAcgaggttgattttttatttattttttgtaattatttttgttGCTT
CGTGGTGTTTATAAATATTCTAGAAAGATCATTATTGCTATatattgaaa
aaagttttccgcCATCGGGGAGAGTGTTGGTTGCCGTATTTTGTTGACAT
TTGTGGTGTTTATTCGATCATCCCGGGAAAAGTTGCGCCCGCCCTTCACG
ATTATTACACCGATGATGGCGGGATTTTTATTTGGAGATTCCGCCCGGTT
GTATAATGTATCGTTGCCGTAAGATTTACAAGTGCCATTATTTAAAACCT
CCACCATCCTGATGACATACTTTCCATTCTGAAGTTGAACAACTGGAACA
TCAACATCACACCACAACAAGAAGGTATGTCTCCTAACCTAAAAGACCTA
TCAAAACTGCTTTAAATTTGAGATAGGATTTGTCAATCACTTAACAAAAA
TCTGTATGATTTATGATCAATCCAAAATACTTTTACTGTTAACTTTACTG
TTTTTAACATTTAATATTTTATAGTTGTGTGTTGAGAGAGAAGCAGCAGA
CTCATCATAGCATGATCAACTTATACTTTTTTCTTAGACCTTGTGAAAAT
GTCAAAGAGGAAGGCTGACGGAAAAGCAGTGACACCATCAACCTCATCTC
AAGAAGGTACTAGACAGCTTTATATAATTCACTTTTCTTAGGCCgagatc
acaaataacttgtgttcgcgTCATTTTCAGGTCCAAAATATGAGTCGGTT
GGTCAGTAGGTCGGTAAAGAATACGTcagaaaattgagatttttagaCCA
TGAGTCAACCTGTCTTGTCAGAGAAATTTCCAAATGGAGGAGAGAGCTAC
TCATACGCGCATTTTCGGCTGCCGTACATTTTTCATAACACAGACGGCCG
AGTGAAAATCCAACGTTTTTCGACTTTCCGACTCGAAAATGTCAGAAATT
TAGCTAAAATTAAAAGTTGGACGAtgcgaacacaagttatttgtggtcTC
GGCTGATTGAAAACGACTCCTCCTTGCGGCTCGTTTTCCCGCTTCCTGCT
TGCATGCTTAACTTTCTGTAATTTAAACGTGCAATAACACTCTAAAATAA
TCCACTTTTTAAGAGTACAATATTACACtgctttaaaaaattcaaaggcA
GGGCACCATAACTTCTTCAGGCTAGAGACggacatttttcattttctctg
cGCCTTTACATCCTATTTCTCAATAAAAATATGATATGCAAGAACTATAC
ACGATACTATATCTTGTGCATAATTCAACATAATTTAATGGTACAATTAC
CTTTTAAGGTTTGACCATGG Run BLAST on NCBI transcript from alignment at sc0002878:3911..5280 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041442 ID=TCONS_00041442|Name=TCONS_00041442|organism=Clytia hemisphaerica|type=transcript|length=1370bp|location=Sequence derived from alignment at sc0002878:3911..5280 (Clytia hemisphaerica)
CCATGGTCAAACCTTAAAAGGTAATTGTACCATTAAATTATGTTGAATTA
TGCACAAGATATAGTATCGTGTATAGTTCTTGCATATCATATTTTTATTG
AGAAATAGGATGTAAAGGCgcagagaaaatgaaaaatgtccGTCTCTAGC
CTGAAGAAGTTATGGTGCCCTgcctttgaattttttaaagcaGTGTAATA
TTGTACTCTTAAAAAGTGGATTATTTTAGAGTGTTATTGCACGTTTAAAT
TACAGAAAGTTAAGCATGCAAGCAGGAAGCGGGAAAACGAGCCGCAAGGA
GGAGTCGTTTTCAATCAGCCGAgaccacaaataacttgtgttcgcaTCGT
CCAACTTTTAATTTTAGCTAAATTTCTGACATTTTCGAGTCGGAAAGTCG
AAAAACGTTGGATTTTCACTCGGCCGTCTGTGTTATGAAAAATGTACGGC
AGCCGAAAATGCGCGTATGAGTAGCTCTCTCCTCCATTTGGAAATTTCTC
TGACAAGACAGGTTGACTCATGGtctaaaaatctcaattttctgACGTAT
TCTTTACCGACCTACTGACCAACCGACTCATATTTTGGACCTGAAAATGA
cgcgaacacaagttatttgtgatctcGGCCTAAGAAAAGTGAATTATATA
AAGCTGTCTAGTACCTTCTTGAGATGAGGTTGATGGTGTCACTGCTTTTC
CGTCAGCCTTCCTCTTTGACATTTTCACAAGGTCTAAGAAAAAAGTATAA
GTTGATCATGCTATGATGAGTCTGCTGCTTCTCTCTCAACACACAACTAT
AAAATATTAAATGTTAAAAACAGTAAAGTTAACAGTAAAAGTATTTTGGA
TTGATCATAAATCATACAGATTTTTGTTAAGTGATTGACAAATCCTATCT
CAAATTTAAAGCAGTTTTGATAGGTCTTTTAGGTTAGGAGACATACCTTC
TTGTTGTGGTGTGATGTTGATGTTCCAGTTGTTCAACTTCAGAATGGAAA
GTATGTCATCAGGATGGTGGAGGTTTTAAATAATGGCACTTGTAAATCTT
ACGGCAACGATACATTATACAACCGGGCGGAATCTCCAAATAAAAATCCC
GCCATCATCGGTGTAATAATCGTGAAGGGCGGGCGCAACTTTTCCCGGGA
TGATCGAATAAACACCACAAATGTCAACAAAATACGGCAACCAACACTCT
CCCCGATGgcggaaaacttttttcaatatATAGCAATAATGATCTTTCTA
GAATATTTATAAACACCACGAAGCaacaaaaataattacaaaaaataaat
aaaaaatcaacctcgTTTTCTTCCCGCCCGTGTTGTATCACCAGCTTATC
TACGATTTTGATAGCGCTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041442-exon-sc0002878-1491911889:3911..5280 | TCONS_00041442-exon-sc0002878-1491911889:3911..5280 | Clytia hemisphaerica | exon |
| TCONS_00041442-exon-sc0002878-1510915933:3911..5280 | TCONS_00041442-exon-sc0002878-1510915933:3911..5280 | Clytia hemisphaerica | exon |
| TCONS_00041442-exon-sc0002878-1575043694:3911..5280 | TCONS_00041442-exon-sc0002878-1575043694:3911..5280 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002878 | supercontig | sc0002878:3911..5280 . |
Blast
The following BLAST results are available for this feature:
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