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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041422 ID=TCONS_00041422|Name=TCONS_00041422|organism=Clytia hemisphaerica|type=transcript|length=2096bp
CTCCTTCTTCAAATGATCATATGCATAGAATGTAGCTTGTCCTTTCTTGC
GACTGTCCTCTTCAAGTGATAATGCTCCATAGCAGGGTTTGTCTTCAATA
TTAACATTGGTTTTTGAAAATTCGTGTGTTTTGTATTCGTTTGCTAGCTG
ATCCTGTTTTCTTTTCACCCGTTGCCTCAACTGATCCAAtgtgtgttttt
tcttttcGATATGTAGACCAAATGAACTAGCAAAAGCAACAACTTCATCC
TTTGATCtcattttttccaattcttttgaACCGAAGGAAATGAATGATAT
TTGTTGATCAGGTTGGAAGAAAAAAAGACGTTTATCCACGTACCACATTT
GCTGAGCAATAACGGAATGAACGATATCGATCTTGTCCACTGGATTGTGT
AACTGGGTACGATACACTTTGCTTTCACTGGTAGAGTCATCATACGTCAG
TAAAAAAATGTATCCTACCGAACCAAGACAAACATCGATAGGGTTTTTAA
ACATTCCAACACGATTCTTGTTGGTAAATTTGGTTGTCTCGGGTATAAGG
GTGTGTACAACAGGACCGACATCTTCCAGATACTCGAGCAGCTTTCTATC
TGAAAGTTTCAACACGGCAACGGGGTCTTGTCGGTCCTTGTTACGAACAT
AATCGTTTTTAGGAATCAGCTTTTTGACGATCTTCATTTCTGTGTCACTC
GACTTATTTCTCAAGGTATGAAGGAACGCCAAAGAACCTCTCTCATCCAA
TAACTTTAAGAGCCAATTACTAAACGAAGCTTTCAGGCTTTTCCCTAGAT
GAGGTGGATCTGGAAGAGGGACGGTCAGTGCTAAGGCTGGGTCAATACAC
TTCTTTTGGATTTCGTCCTTAAGGGAAAGGAACATTTGCTTATTCCCCTC
TTCACAGTCTGTTGCAATCACCAAGACTGCCCGTTTAATACATTGTTGCT
TACTTGTAAGGCATTGGCGGCACGCTCGAGCTTGAGGATAAATGCTGACC
TGGCCATCAGCAATACAAGCACTGCAGAGTTCTCCGTTTTTATAACAGTT
TTTACAAAGGGAATCACAACCATCGTAAGGACCCATGATTAGCTTATCTG
ACTTAGCTTTAACAGTACATGCCTTACAAATCTGAAGAATTTTCAAGTGT
TTAGTGAACAtttcttttagatttttacCTGACTTTCCGGCTTTGGGTGT
ATACTCGACAGATACAGGTAACGAAACCTTATCATCTAGAGTTGTAACTG
AACCTACTACAGCTTCGGTTATTAACTGTTCCTTGAGCATTTCAGGGTCT
GGCGGGtcattatttttcacaaaatcgaTGTCAACAGGAACTGCTAACCC
AATATTTTGTTTGGTGACAGGATCAAATTCGACTGCCGGTTTCAGTGCTG
TGCCGTCGTTACTGTAACAACACGGGAAAACAAGTAGTCGTGGGTTTGAA
ATGAGTGGCTCTGGTGTTTCTTCAGTCGCGTCAGTTTTGTCAGCCGATGA
GGATAGTTCAAGGTTTAATAGGCTCAAACACTTTATAATCCCTGACTCGG
AAGAAAAGGCTACATTTCCTTTGAGGCATTGAGTTTCAGACGGACCTCCG
AGGTTCAtacgaagatttttgaaatctcGATTTTCGTCAAATGCTTTTCC
CTGTCCGTAAAACATTGGACCTCTTATAAAGTTAAAGGTTCTTCTTCCAC
CGAGGTAAATGATGGTAGAATAAAATTCAACTACTTCAGGGTCATAAGAA
TGATTATGGTCATAAAATCGCTCAATGACGTCTTTCAAGTATTTGTAAAA
TATTCTGTCTCTCGAAATAGTTCCATCTCGCAGCAATTTATTAAGTTTGA
CGGCTAGGTCATCGACCTTCTCGAAATTACAACCATGAATCCTCCAATCG
TCCTTCTCTGATGCTTGTTGCATGTAGCACGTTTCTATGCATGTTTCTAT
GTCTAATACATCTTCGTATTCGTCAACAACTTCAAATGAATCCTCGTCAT
CTACATCCTCATCAGAAGAAATAAACTCCATCTCACTCATCTCTTGATCT
TGACCACTACTGTCTGAtctgaaaatgacaaaaattttatACATAA Run BLAST on NCBI protein sequence of TCONS_00041422-protein >TCONS_00041422-protein ID=TCONS_00041422-protein|Name=TCONS_00041422-protein|organism=Clytia hemisphaerica|type=polypeptide|length=698bp
MYKIFVIFRSDSSGQDQEMSEMEFISSDEDVDDEDSFEVVDEYEDVLDIE
TCIETCYMQQASEKDDWRIHGCNFEKVDDLAVKLNKLLRDGTISRDRIFY
KYLKDVIERFYDHNHSYDPEVVEFYSTIIYLGGRRTFNFIRGPMFYGQGK
AFDENRDFKNLRMNLGGPSETQCLKGNVAFSSESGIIKCLSLLNLELSSS
ADKTDATEETPEPLISNPRLLVFPCCYSNDGTALKPAVEFDPVTKQNIGL
AVPVDIDFVKNNDPPDPEMLKEQLITEAVVGSVTTLDDKVSLPVSVEYTP
KAGKSGKNLKEMFTKHLKILQICKACTVKAKSDKLIMGPYDGCDSLCKNC
YKNGELCSACIADGQVSIYPQARACRQCLTSKQQCIKRAVLVIATDCEEG
NKQMFLSLKDEIQKKCIDPALALTVPLPDPPHLGKSLKASFSNWLLKLLD
ERGSLAFLHTLRNKSSDTEMKIVKKLIPKNDYVRNKDRQDPVAVLKLSDR
KLLEYLEDVGPVVHTLIPETTKFTNKNRVGMFKNPIDVCLGSVGYIFLLT
YDDSTSESKVYRTQLHNPVDKIDIVHSVIAQQMWYVDKRLFFFQPDQQIS
FISFGSKELEKMRSKDEVVAFASSFGLHIEKKKHTLDQLRQRVKRKQDQL
ANEYKTHEFSKTNVNIEDKPCYGALSLEEDSRKKGQATFYAYDHLKKE Run BLAST on NCBI transcript from alignment at sc0002859:12387..14482 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041422 ID=TCONS_00041422|Name=TCONS_00041422|organism=Clytia hemisphaerica|type=transcript|length=2096bp|location=Sequence derived from alignment at sc0002859:12387..14482 (Clytia hemisphaerica)
TTATGTataaaatttttgtcattttcagaTCAGACAGTAGTGGTCAAGAT
CAAGAGATGAGTGAGATGGAGTTTATTTCTTCTGATGAGGATGTAGATGA
CGAGGATTCATTTGAAGTTGTTGACGAATACGAAGATGTATTAGACATAG
AAACATGCATAGAAACGTGCTACATGCAACAAGCATCAGAGAAGGACGAT
TGGAGGATTCATGGTTGTAATTTCGAGAAGGTCGATGACCTAGCCGTCAA
ACTTAATAAATTGCTGCGAGATGGAACTATTTCGAGAGACAGAATATTTT
ACAAATACTTGAAAGACGTCATTGAGCGATTTTATGACCATAATCATTCT
TATGACCCTGAAGTAGTTGAATTTTATTCTACCATCATTTACCTCGGTGG
AAGAAGAACCTTTAACTTTATAAGAGGTCCAATGTTTTACGGACAGGGAA
AAGCATTTGACGAAAATCgagatttcaaaaatcttcgtaTGAACCTCGGA
GGTCCGTCTGAAACTCAATGCCTCAAAGGAAATGTAGCCTTTTCTTCCGA
GTCAGGGATTATAAAGTGTTTGAGCCTATTAAACCTTGAACTATCCTCAT
CGGCTGACAAAACTGACGCGACTGAAGAAACACCAGAGCCACTCATTTCA
AACCCACGACTACTTGTTTTCCCGTGTTGTTACAGTAACGACGGCACAGC
ACTGAAACCGGCAGTCGAATTTGATCCTGTCACCAAACAAAATATTGGGT
TAGCAGTTCCTGTTGACAtcgattttgtgaaaaataatgaCCCGCCAGAC
CCTGAAATGCTCAAGGAACAGTTAATAACCGAAGCTGTAGTAGGTTCAGT
TACAACTCTAGATGATAAGGTTTCGTTACCTGTATCTGTCGAGTATACAC
CCAAAGCCGGAAAGTCAGgtaaaaatctaaaagaaaTGTTCACTAAACAC
TTGAAAATTCTTCAGATTTGTAAGGCATGTACTGTTAAAGCTAAGTCAGA
TAAGCTAATCATGGGTCCTTACGATGGTTGTGATTCCCTTTGTAAAAACT
GTTATAAAAACGGAGAACTCTGCAGTGCTTGTATTGCTGATGGCCAGGTC
AGCATTTATCCTCAAGCTCGAGCGTGCCGCCAATGCCTTACAAGTAAGCA
ACAATGTATTAAACGGGCAGTCTTGGTGATTGCAACAGACTGTGAAGAGG
GGAATAAGCAAATGTTCCTTTCCCTTAAGGACGAAATCCAAAAGAAGTGT
ATTGACCCAGCCTTAGCACTGACCGTCCCTCTTCCAGATCCACCTCATCT
AGGGAAAAGCCTGAAAGCTTCGTTTAGTAATTGGCTCTTAAAGTTATTGG
ATGAGAGAGGTTCTTTGGCGTTCCTTCATACCTTGAGAAATAAGTCGAGT
GACACAGAAATGAAGATCGTCAAAAAGCTGATTCCTAAAAACGATTATGT
TCGTAACAAGGACCGACAAGACCCCGTTGCCGTGTTGAAACTTTCAGATA
GAAAGCTGCTCGAGTATCTGGAAGATGTCGGTCCTGTTGTACACACCCTT
ATACCCGAGACAACCAAATTTACCAACAAGAATCGTGTTGGAATGTTTAA
AAACCCTATCGATGTTTGTCTTGGTTCGGTAGGATACATTTTTTTACTGA
CGTATGATGACTCTACCAGTGAAAGCAAAGTGTATCGTACCCAGTTACAC
AATCCAGTGGACAAGATCGATATCGTTCATTCCGTTATTGCTCAGCAAAT
GTGGTACGTGGATAAACGTCTTTTTTTCTTCCAACCTGATCAACAAATAT
CATTCATTTCCTTCGGTtcaaaagaattggaaaaaatgaGATCAAAGGAT
GAAGTTGTTGCTTTTGCTAGTTCATTTGGTCTACATATCgaaaagaaaaa
acacacaTTGGATCAGTTGAGGCAACGGGTGAAAAGAAAACAGGATCAGC
TAGCAAACGAATACAAAACACACGAATTTTCAAAAACCAATGTTAATATT
GAAGACAAACCCTGCTATGGAGCATTATCACTTGAAGAGGACAGTCGCAA
GAAAGGACAAGCTACATTCTATGCATATGATCATTTGAAGAAGGAG Coding sequence (CDS) from alignment at sc0002859:12387..14482 >TCONS_00041422 ID=TCONS_00041422|Name=TCONS_00041422|organism=Clytia hemisphaerica|type=CDS|length=2094bp|location=Sequence derived from alignment at sc0002859:12387..14482 (Clytia hemisphaerica)
ATGTataaaatttttgtcattttcagaTCAGACAGTAGTGGTCAAGATCA
AGAGATGAGTGAGATGGAGTTTATTTCTTCTGATGAGGATGTAGATGACG
AGGATTCATTTGAAGTTGTTGACGAATACGAAGATGTATTAGACATAGAA
ACATGCATAGAAACGTGCTACATGCAACAAGCATCAGAGAAGGACGATTG
GAGGATTCATGGTTGTAATTTCGAGAAGGTCGATGACCTAGCCGTCAAAC
TTAATAAATTGCTGCGAGATGGAACTATTTCGAGAGACAGAATATTTTAC
AAATACTTGAAAGACGTCATTGAGCGATTTTATGACCATAATCATTCTTA
TGACCCTGAAGTAGTTGAATTTTATTCTACCATCATTTACCTCGGTGGAA
GAAGAACCTTTAACTTTATAAGAGGTCCAATGTTTTACGGACAGGGAAAA
GCATTTGACGAAAATCgagatttcaaaaatcttcgtaTGAACCTCGGAGG
TCCGTCTGAAACTCAATGCCTCAAAGGAAATGTAGCCTTTTCTTCCGAGT
CAGGGATTATAAAGTGTTTGAGCCTATTAAACCTTGAACTATCCTCATCG
GCTGACAAAACTGACGCGACTGAAGAAACACCAGAGCCACTCATTTCAAA
CCCACGACTACTTGTTTTCCCGTGTTGTTACAGTAACGACGGCACAGCAC
TGAAACCGGCAGTCGAATTTGATCCTGTCACCAAACAAAATATTGGGTTA
GCAGTTCCTGTTGACAtcgattttgtgaaaaataatgaCCCGCCAGACCC
TGAAATGCTCAAGGAACAGTTAATAACCGAAGCTGTAGTAGGTTCAGTTA
CAACTCTAGATGATAAGGTTTCGTTACCTGTATCTGTCGAGTATACACCC
AAAGCCGGAAAGTCAGgtaaaaatctaaaagaaaTGTTCACTAAACACTT
GAAAATTCTTCAGATTTGTAAGGCATGTACTGTTAAAGCTAAGTCAGATA
AGCTAATCATGGGTCCTTACGATGGTTGTGATTCCCTTTGTAAAAACTGT
TATAAAAACGGAGAACTCTGCAGTGCTTGTATTGCTGATGGCCAGGTCAG
CATTTATCCTCAAGCTCGAGCGTGCCGCCAATGCCTTACAAGTAAGCAAC
AATGTATTAAACGGGCAGTCTTGGTGATTGCAACAGACTGTGAAGAGGGG
AATAAGCAAATGTTCCTTTCCCTTAAGGACGAAATCCAAAAGAAGTGTAT
TGACCCAGCCTTAGCACTGACCGTCCCTCTTCCAGATCCACCTCATCTAG
GGAAAAGCCTGAAAGCTTCGTTTAGTAATTGGCTCTTAAAGTTATTGGAT
GAGAGAGGTTCTTTGGCGTTCCTTCATACCTTGAGAAATAAGTCGAGTGA
CACAGAAATGAAGATCGTCAAAAAGCTGATTCCTAAAAACGATTATGTTC
GTAACAAGGACCGACAAGACCCCGTTGCCGTGTTGAAACTTTCAGATAGA
AAGCTGCTCGAGTATCTGGAAGATGTCGGTCCTGTTGTACACACCCTTAT
ACCCGAGACAACCAAATTTACCAACAAGAATCGTGTTGGAATGTTTAAAA
ACCCTATCGATGTTTGTCTTGGTTCGGTAGGATACATTTTTTTACTGACG
TATGATGACTCTACCAGTGAAAGCAAAGTGTATCGTACCCAGTTACACAA
TCCAGTGGACAAGATCGATATCGTTCATTCCGTTATTGCTCAGCAAATGT
GGTACGTGGATAAACGTCTTTTTTTCTTCCAACCTGATCAACAAATATCA
TTCATTTCCTTCGGTtcaaaagaattggaaaaaatgaGATCAAAGGATGA
AGTTGTTGCTTTTGCTAGTTCATTTGGTCTACATATCgaaaagaaaaaac
acacaTTGGATCAGTTGAGGCAACGGGTGAAAAGAAAACAGGATCAGCTA
GCAAACGAATACAAAACACACGAATTTTCAAAAACCAATGTTAATATTGA
AGACAAACCCTGCTATGGAGCATTATCACTTGAAGAGGACAGTCGCAAGA
AAGGACAAGCTACATTCTATGCATATGATCATTTGAAGAAGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00041422-exon-sc0002859-1491911889:12387..14482 | TCONS_00041422-exon-sc0002859-1491911889:12387..14482 | Clytia hemisphaerica | exon |
| TCONS_00041422-exon-sc0002859-1510915933:12387..14482 | TCONS_00041422-exon-sc0002859-1510915933:12387..14482 | Clytia hemisphaerica | exon |
| TCONS_00041422-exon-sc0002859-1575043694:12387..14482 | TCONS_00041422-exon-sc0002859-1575043694:12387..14482 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0002859 | supercontig | sc0002859:12387..14482 . |
Blast
The following BLAST results are available for this feature:
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