TCONS_00041421 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041421
Unique NameTCONS_00041421
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1503

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041421 ID=TCONS_00041421|Name=TCONS_00041421|organism=Clytia hemisphaerica|type=transcript|length=1503bp
AGCTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAAC
AACCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCAC
TGATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacC
CATTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCAC
TGGTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCA
ATGTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGG
TTGGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCA
ATCATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGG
TTTGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGT
CAAAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGA
AGATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCA
GGCGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGT
GTGACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCT
TTGAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCAT
GAATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGA
TTGACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAG
TCCActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCA
AACGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCA
TCGATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAA
TCGGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAAC
TAAACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGT
TCATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGT
GCACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGC
TGTGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACG
TCAATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAG
GATGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAG
ACGCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTC
GTTCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTT
GCTCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAG
TCCTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGG
TTA
Run BLAST on NCBI

protein sequence of TCONS_00041421-protein

>TCONS_00041421-protein ID=TCONS_00041421-protein|Name=TCONS_00041421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
LFPRIKINYDYIEVKNNQYLKLSSRAYVACPFTDDEFGVISPRNFFNFDP
FRTECHGGYLASAIAHWFPSLPDQVDLAHRIYQCLLCHQFPDKTKKLTLV
GKIDSGKTSLMNLFSSIIPKEKIAILTKESTFGLSMINDDTELLFVDEWS
KEMTPPDIAKTLFQNGRFPQAVKFKTPRMQTMQAGVFLTCNEKPKFDTQC
DQESVERRLAIFETRALSTLDPAAPGWIKDNAMNCLTYIMNLVNNNIEMI
DKDDLSYTLPVNVKCESTVLKENLDQKQLEGIQTCLIDQDKSVGLAESPI
DGLEIFHLEEFDVDKQSETCGSQQLDDVDLVTTKRPMKDDQFDTESLIGF
ISTTDVDSDIEPPKKRARKNWFNSPQRETDKDAVESVVEYLVRNVSSKDV
NGSSTLKTQTNAMPTQDAVESPIKDKTFIKSPRRFKVEDINVPEYWRMVR
SYLHHNLKFKTLNGPVAHSLFRLFEKFEGALKSPRPPTMADPKLDASFLV
Run BLAST on NCBI

transcript from alignment at sc0002859:6140..8211+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041421 ID=TCONS_00041421|Name=TCONS_00041421|organism=Clytia hemisphaerica|type=transcript|length=2072bp|location=Sequence derived from alignment at sc0002859:6140..8211+ (Clytia hemisphaerica)
AGCTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAAC
AACCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCAC
TGATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacC
CATTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCAC
TGGTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCA
ATGTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGG
TTGGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCA
ATCATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGG
TTTGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGT
CAAAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGA
AGATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCA
GGCGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGT
GTGACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCT
TTGAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCAT
GAATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGA
TTGACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAG
TCCActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCA
AACGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCA
TCGATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAGTAAG
TGATCATTTTTCGTTTCATTTCCTGGTCTTTAGATTCTCTGTGATATCTT
catatgtttttaaaatgacTTTGCCCATAAAGTTCCATGGAAGCCAGATG
TATTTCAAAATATACTTTTCGCTTTTCTCAGAACAATCGGAAACTTGTGG
ATCACAACAGCTTGACGACGTAGATTTAGTCACAACTAAACGTCCAATGA
AGGATGGTATgtctaatttttgttttgaaattttcctcAAATGGCCTTAT
TTAATCATGGCAGATTTTATTCAGCTCATTGGCTTACACACAAGTCTATC
TTGAAAGCTTGATAGTACGACATTTCGTTAACATGAATGAACTTCAGCGG
AAGCATATTTGTGAACAGTTCTTTTCGTATTTTCTCTCAGATCAATTCGA
CACGGAATCTCTTATCGGGTTCATTTCCACAACAGATGTCGACTCGGACA
TAGAGCCCCCAAAGAAACGTGCACGTAAAAACTGGTTCAACAGCCCACAA
CGAGAGACCGACAAAGACGCTGTGGAAAGTGTTGTTGAATATCTCGTACG
AAACGGTAAGAGCACTTTTTTGATGGTCTTTGTAATCCAAATATGTTGCT
TTGCAGGTATAAAGTAATTTAGCTTTAGTTCATTCTCCATGCAgcttcaa
tttttaaataagaaatttttgttatttCAGTTTCATCAAAAGACGTCAAT
GGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGATGG
TAAGTGAACTACTTACGCTAtctccaatttttgaaaacaaaggtGCTCTG
ATTGACCCAATTTAAGACAAAACATAACAACTTGTGGTCCCACAAAgtga
gaaaagtttttttctctttttagcggTCGAAAGTCCCATCAAAGACAAAA
CGTTCATCAAGTCACCAAGACGCTTCAAGGTGGAAGATATCAATGTACCC
GAGTATTGGCGTATGGTTCGTTCATACCTTCATCACAACTTGAAATTCAA
GACGTTAAATGGACCTGTTGCTCACTCCTTATTTCGTctctttgaaaagt
ttgaaggTGCATTGAAAAGTCCTCGACCACCAACGATGGCTGATCCAAAG
CTAGATGCTTCATTCTTGGTTA

Coding sequence (CDS) from alignment at sc0002859:6140..8211+

>TCONS_00041421 ID=TCONS_00041421|Name=TCONS_00041421|organism=Clytia hemisphaerica|type=CDS|length=7500bp|location=Sequence derived from alignment at sc0002859:6140..8211+ (Clytia hemisphaerica)
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATC
GGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTA
AACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGTTC
ATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGTGC
ACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGCTG
TGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACGTC
AATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGA
TGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATC
GGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTA
AACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGTTC
ATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGTGC
ACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGCTG
TGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACGTC
AATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGA
TGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATC
GGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTA
AACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGTTC
ATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGTGC
ACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGCTG
TGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACGTC
AATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGA
TGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATC
GGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTA
AACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGTTC
ATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGTGC
ACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGCTG
TGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACGTC
AATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGA
TGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
CTCTTTCCCAGAATCAAGATCAACTATGACTATATCGAGGTCAAAAACAA
CCAATACCTGAAATTATCAAGCAGGGCCTACGTTGCTTGCCCATTCACTG
ATGATGAGTTTGGAGTGATAAGTcctcgtaacttttttaatttcgacCCA
TTCCGAACCGAATGTCACGGAGGATACTTGGCTTCTGCAATCGCCCACTG
GTTCCCAAGTCTCCCCGACCAAGTGGACCTCGCCCATCGGATTTATCAAT
GTCTCCTTTGTCATCAATTTCCAGACAAAACCAAGAAATTGACATTGGTT
GGAAAAATTGATTCTGGCAAAACGTCACTGATGAACCTCTTTTCATCAAT
CATCCCGAAagaaaaaatcgccattttgacaaAAGAAAGCACTTTCGGTT
TGTCTATGATCAACGACGACACGGAGCTTCTGTTTGTGGATGAGTGGTCA
AAGGAGATGACACCACCTGACATTGCTAAAACCCTATTTCAAAATGGAAG
ATTCCCCCAAGCTGTCAAATTCAAAACGCCGAGAATGCAGACCATGCAGG
CGGGTGTTTTCTTGACCTGCAACGAAAAGCCAAAGTTCGACACTCAGTGT
GACCAAGAGTCTGTCGAGAGGCGATTGGCAATATTTGAGACACGGGCTTT
GAGCACTCTTGACCCTGCAGCCCCTGGATGGATCAAGGATAATGCCATGA
ATTGCTTAACGTACATCATGAACCTGGTCAACAACAACATTGAGATGATT
GACAAGGACGACTTGTCCTACACGCTGCCGGTCAACGTTAAATGCGAGTC
CActgttttaaaagaaaatctcgACCAAAAGCAATTAGAAGGGATCCAAA
CGTGTTTGATCGATCAAGACAAGTCTGTTGGGTTGGCAGAATCGCCCATC
GATGGATTGGAAATCTTCCATCTAGAAGAATTTGACGTTGATAAACAATC
GGAAACTTGTGGATCACAACAGCTTGACGACGTAGATTTAGTCACAACTA
AACGTCCAATGAAGGATGATCAATTCGACACGGAATCTCTTATCGGGTTC
ATTTCCACAACAGATGTCGACTCGGACATAGAGCCCCCAAAGAAACGTGC
ACGTAAAAACTGGTTCAACAGCCCACAACGAGAGACCGACAAAGACGCTG
TGGAAAGTGTTGTTGAATATCTCGTACGAAACGTTTCATCAAAAGACGTC
AATGGATCATCGACGTTGAAAACACAAACTAATGCAATGCCTACACAGGA
TGcggTCGAAAGTCCCATCAAAGACAAAACGTTCATCAAGTCACCAAGAC
GCTTCAAGGTGGAAGATATCAATGTACCCGAGTATTGGCGTATGGTTCGT
TCATACCTTCATCACAACTTGAAATTCAAGACGTTAAATGGACCTGTTGC
TCACTCCTTATTTCGTctctttgaaaagtttgaaggTGCATTGAAAAGTC
CTCGACCACCAACGATGGCTGATCCAAAGCTAGATGCTTCATTCTTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025395XLOC_025395Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041421-exon-sc0002859-1491911889:6140..7084TCONS_00041421-exon-sc0002859-1491911889:6140..7084Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1510915933:6140..7084TCONS_00041421-exon-sc0002859-1510915933:6140..7084Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1575043694:6140..7084TCONS_00041421-exon-sc0002859-1575043694:6140..7084Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1491911889:7221..7295TCONS_00041421-exon-sc0002859-1491911889:7221..7295Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1510915933:7221..7295TCONS_00041421-exon-sc0002859-1510915933:7221..7295Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1575043694:7221..7295TCONS_00041421-exon-sc0002859-1575043694:7221..7295Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1491911889:7480..7644TCONS_00041421-exon-sc0002859-1491911889:7480..7644Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1510915933:7480..7644TCONS_00041421-exon-sc0002859-1510915933:7480..7644Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1575043694:7480..7644TCONS_00041421-exon-sc0002859-1575043694:7480..7644Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1491911889:7770..7838TCONS_00041421-exon-sc0002859-1491911889:7770..7838Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1510915933:7770..7838TCONS_00041421-exon-sc0002859-1510915933:7770..7838Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1575043694:7770..7838TCONS_00041421-exon-sc0002859-1575043694:7770..7838Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1491911889:7963..8211TCONS_00041421-exon-sc0002859-1491911889:7963..8211Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1510915933:7963..8211TCONS_00041421-exon-sc0002859-1510915933:7963..8211Clytia hemisphaericaexon
TCONS_00041421-exon-sc0002859-1575043694:7963..8211TCONS_00041421-exon-sc0002859-1575043694:7963..8211Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041421-proteinTCONS_00041421-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002859supercontigsc0002859:6140..8211 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.301588	0.374304	0.0620861	0.0911124	0.221841	0.0876509	0.281992	0.362997	1.15519	3.46276	1.27775	0.566049	0.510559	0.340856	0.544892	0.684996	0.205819	0.337533	0.262305	0.0936239	0.212067	0.116369	0.754462	0.514437	1.23633	6.54158	0.639103	0.120365	0.334739	0.186025
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041421 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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