TCONS_00041407 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041407
Unique NameTCONS_00041407
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length197

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041407 ID=TCONS_00041407|Name=TCONS_00041407|organism=Clytia hemisphaerica|type=transcript|length=197bp
AGAGGAAGAAAACCTTTCAAAAACAAATGATTATATACCAGTTGAAGTTA
GAGAACAATGCGAACATTTGAGGGTAATTGACCCAGAAAACATTGATATC
ATTGAAACTTTTTTATATCTAGTGCAGAACTACGCGTGAATTGCTGAATG
ACTTTTGATAATGATATTTTATATGAGAATGGTACACCTCATTATCA
Run BLAST on NCBI

transcript from alignment at sc0002849:12004..12200

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041407 ID=TCONS_00041407|Name=TCONS_00041407|organism=Clytia hemisphaerica|type=transcript|length=197bp|location=Sequence derived from alignment at sc0002849:12004..12200 (Clytia hemisphaerica)
TGATAATGAGGTGTACCATTCTCATATAAAATATCATTATCAAAAGTCAT
TCAGCAATTCACGCGTAGTTCTGCACTAGATATAAAAAAGTTTCAATGAT
ATCAATGTTTTCTGGGTCAATTACCCTCAAATGTTCGCATTGTTCTCTAA
CTTCAACTGGTATATAATCATTTGTTTTTGAAAGGTTTTCTTCCTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025381XLOC_025381Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041407-exon-sc0002849-1491911889:12004..12200TCONS_00041407-exon-sc0002849-1491911889:12004..12200Clytia hemisphaericaexon
TCONS_00041407-exon-sc0002849-1510915933:12004..12200TCONS_00041407-exon-sc0002849-1510915933:12004..12200Clytia hemisphaericaexon
TCONS_00041407-exon-sc0002849-1575043694:12004..12200TCONS_00041407-exon-sc0002849-1575043694:12004..12200Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002849supercontigsc0002849:12004..12200 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041407 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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