TCONS_00041379 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041379
Unique NameTCONS_00041379
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041379 ID=TCONS_00041379|Name=TCONS_00041379|organism=Clytia hemisphaerica|type=transcript|length=202bp
GAGTTTCAGAACCCCAAATTTGCCACAAAACAGCCCCTCATTGATACGAA
CTTGCATGGAAAATTTGAAGCTTATACCATAACGCCGTCGGGAGTTATta
gcagattccgtagatttgtaatttgcggaatctcaTTCCGGGCTGAGAAT
GAGATTCCGCAAATTAAAAGGCGGAATCTGATTCCGTAAATTACAATAAG
CC
Run BLAST on NCBI

transcript from alignment at sc0002835:6382..6583

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041379 ID=TCONS_00041379|Name=TCONS_00041379|organism=Clytia hemisphaerica|type=transcript|length=202bp|location=Sequence derived from alignment at sc0002835:6382..6583 (Clytia hemisphaerica)
GGCTTATTGTAATTTACGGAATCAGATTCCGCCTTTTAATTTGCGGAATC
TCATTCTCAGCCCGGAAtgagattccgcaaattacaaatctacggaatct
gctaATAACTCCCGACGGCGTTATGGTATAAGCTTCAAATTTTCCATGCA
AGTTCGTATCAATGAGGGGCTGTTTTGTGGCAAATTTGGGGTTCTGAAAC
TC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025356XLOC_025356Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041379-exon-sc0002835-1491911889:6382..6583TCONS_00041379-exon-sc0002835-1491911889:6382..6583Clytia hemisphaericaexon
TCONS_00041379-exon-sc0002835-1510915933:6382..6583TCONS_00041379-exon-sc0002835-1510915933:6382..6583Clytia hemisphaericaexon
TCONS_00041379-exon-sc0002835-1575043694:6382..6583TCONS_00041379-exon-sc0002835-1575043694:6382..6583Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002835supercontigsc0002835:6382..6583 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.22049	4.86608	11.7958	17.59	86.7218	17.4486	36.9941	26.8746	6.02695	1.41904	0	0	0.168596	0	3.67313	2.06745	3.09388	0	0	1.08644	2.3663	0	2.43993	4.65956	11.1685	17.6519	0	1.62079	2.22652	4.73397
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041379 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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