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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041254 ID=TCONS_00041254|Name=TCONS_00041254|organism=Clytia hemisphaerica|type=transcript|length=1467bp
NNTACAGAAGTTTTGGAGAAAATTGATGATGCCCTTGAAGCTATCGAAAC
AACGGACGTGGAAGGAATAACAACTGCTTTAAAGAAAGGTAAGCAATTAC
TTGAAACCAGGATAAAGCATTTAATGATCGCCGATGCCTACGGTTGGCTA
ACAGTTAAGTAATTTAAAGCTAATGAATTGACATCTGGGGAGGCAGAGGA
GAAAAGACTAAAGAGGGCAATAAAAAACGCAGAGATTGTCAAAGgccgtt
tttataaaaaacaaaaactttccgATGATTCAGATTACAATAAAGTAATA
AGAAATAAAACCGAACAAAGAAGTTGCATGGACGAAATAGTATGCTACTC
CTGTAAACGTGTTGGACATTACGTATCGCACTGTCCCTTTTCGAATATAG
TATCGCCTTCGTCTCTCGCATATTCAACAAAATCACATTCATCGTcatca
acaaataaaaattcGTCAAGTTCTTCAAAAAGCTCGAAAGACGGTAAAAG
TACCTCCGGATAAAAATATTCGTTATCACTTTAAATTTCACAGTCAAGTT
GCTTACTCGTGTTGAAAAATTGAAGCGTTATAATTCAAACGACTTTCCTT
AGtattattttatcttttatgAACAATTAAATTCATTGTGCTTGATGTAC
TTTAATCAAAAGACAGTAATTTCGAATAATGAAATTCATTGTGTTTAATG
TACTTTAACCAAAGGACAGTCATTTCAATTTATTAAATTTATATACATGA
ACAACACTTAACGTGTAGAATGTAATTCAAATTTGTGTAACATCGTTGTT
TTCTAAATAACTTTCGCCAATTTGATATCAagtttttgttcgttttttcg
CTTCTCCAGAGAGATTTTGGGAATTTGAGCAATCTTCCGAAAGCGTCTCC
TTTGCTGGTAAGATNTTGTTTTCTAAATAACTTTCGCCAATTTGATATCA
agtttttgttcgttttttcgCTTCTCCAGAGAGATTTTGGGAATTTGAGC
AATCTTCCGAAAGCGTCTCCGTTGCTGGtaagataatgaaattttcgcAC
TTTTgggaaaaagatttgaaagcATCAAAATTCGCCCTGGGTGTCGTACG
TGAAGGCTATAAAATACCCTTTGAATCAAACCCACCACCTTTTTACGCTA
AGAACAATGCGTCCAGTTTAAAGAACGACCATTTTGTCAAAGACagcatc
aaaaaacttttggaaGACAGTTGTATTGAAAAAGTATCGGAGCCACCCTA
CTGCATCAACCCCTTAACCGTAGCagaaagaaattctaagcttaGGTTGG
TATTAGATCTCAGACACGTCAATAAATTCAtcaccaaaccaaacaaattc
aaatacgaaaatttaaaacaagcctTAGAGTTAATCGACCAGAACGATTT
TTTAATCACTTTCGACCTCAAAAGCGGATACCATCATGTACCGATCAATC
ATATTTTTCGAACCTTT Run BLAST on NCBI transcript from alignment at sc0002771:1..1467- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041254 ID=TCONS_00041254|Name=TCONS_00041254|organism=Clytia hemisphaerica|type=transcript|length=1467bp|location=Sequence derived from alignment at sc0002771:1..1467- (Clytia hemisphaerica)
NNTACAGAAGTTTTGGAGAAAATTGATGATGCCCTTGAAGCTATCGAAAC
AACGGACGTGGAAGGAATAACAACTGCTTTAAAGAAAGGTAAGCAATTAC
TTGAAACCAGGATAAAGCATTTAATGATCGCCGATGCCTACGGTTGGCTA
ACAGTTAAGTAATTTAAAGCTAATGAATTGACATCTGGGGAGGCAGAGGA
GAAAAGACTAAAGAGGGCAATAAAAAACGCAGAGATTGTCAAAGGCCGTT
TTTATAAAAAACAAAAACTTTCCGATGATTCAGATTACAATAAAGTAATA
AGAAATAAAACCGAACAAAGAAGTTGCATGGACGAAATAGTATGCTACTC
CTGTAAACGTGTTGGACATTACGTATCGCACTGTCCCTTTTCGAATATAG
TATCGCCTTCGTCTCTCGCATATTCAACAAAATCACATTCATCGTCATCA
ACAAATAAAAATTCGTCAAGTTCTTCAAAAAGCTCGAAAGACGGTAAAAG
TACCTCCGGATAAAAATATTCGTTATCACTTTAAATTTCACAGTCAAGTT
GCTTACTCGTGTTGAAAAATTGAAGCGTTATAATTCAAACGACTTTCCTT
AGTATTATTTTATCTTTTATGAACAATTAAATTCATTGTGCTTGATGTAC
TTTAATCAAAAGACAGTAATTTCGAATAATGAAATTCATTGTGTTTAATG
TACTTTAACCAAAGGACAGTCATTTCAATTTATTAAATTTATATACATGA
ACAACACTTAACGTGTAGAATGTAATTCAAATTTGTGTAACATCGTTGTT
TTCTAAATAACTTTCGCCAATTTGATATCAAGTTTTTGTTCGTTTTTTCG
CTTCTCCAGAGAGATTTTGGGAATTTGAGCAATCTTCCGAAAGCGTCTCC
TTTGCTGGTAAGATNTTGTTTTCTAAATAACTTTCGCCAATTTGATATCA
AGTTTTTGTTCGTTTTTTCGCTTCTCCAGAGAGATTTTGGGAATTTGAGC
AATCTTCCGAAAGCGTCTCCGTTGCTGGTAAGATAATGAAATTTTCGCAC
TTTTGGGAAAAAGATTTGAAAGCATCAAAATTCGCCCTGGGTGTCGTACG
TGAAGGCTATAAAATACCCTTTGAATCAAACCCACCACCTTTTTACGCTA
AGAACAATGCGTCCAGTTTAAAGAACGACCATTTTGTCAAAGACAGCATC
AAAAAACTTTTGGAAGACAGTTGTATTGAAAAAGTATCGGAGCCACCCTA
CTGCATCAACCCCTTAACCGTAGCAGAAAGAAATTCTAAGCTTAGGTTGG
TATTAGATCTCAGACACGTCAATAAATTCATCACCAAACCAAACAAATTC
AAATACGAAAATTTAAAACAAGCCTTAGAGTTAATCGACCAGAACGATTT
TTTAATCACTTTCGACCTCAAAAGCGGATACCATCATGTACCGATCAATC
ATATTTTTCGAACCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041254-exon-sc0002771-1575043694:1..1467 | TCONS_00041254-exon-sc0002771-1575043694:1..1467 | Clytia hemisphaerica | exon |
| TCONS_00041254-exon-sc0002771-1510915933:1..1467 | TCONS_00041254-exon-sc0002771-1510915933:1..1467 | Clytia hemisphaerica | exon |
| TCONS_00041254-exon-sc0002771-1491911889:1..1467 | TCONS_00041254-exon-sc0002771-1491911889:1..1467 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002771 | supercontig | sc0002771:1..1467 - |
Blast
The following BLAST results are available for this feature:
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