TCONS_00041238 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041238
Unique NameTCONS_00041238
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041238 ID=TCONS_00041238|Name=TCONS_00041238|organism=Clytia hemisphaerica|type=transcript|length=145bp
TTAACTTTTTCACaattgcttgcttgtttttggTGGGTCCAGCCCAGGTC
TAGGTCCCAAGCAAAAAAATAGttttttaagcagCACCCAGTCCTATGTC
TAGTATAGACTTAGGTAAAAAGATCTCTAATCTCGTAATTTGATT
Run BLAST on NCBI

transcript from alignment at sc0002767:6583..6868+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041238 ID=TCONS_00041238|Name=TCONS_00041238|organism=Clytia hemisphaerica|type=transcript|length=286bp|location=Sequence derived from alignment at sc0002767:6583..6868+ (Clytia hemisphaerica)
TTAACTTTTTCACaattgcttgcttgtttttggTGGGTCCAGCCCAGGTC
TAGGTCCCAAGCAAAAAAATAGGTTCCCCTaaatattaaaagttttttaa
gcagNTCTTCATGAGGTATTGTTAACTTTTTCACaattgcttgcttgttt
ttggTGGGTCCAGCCCAGGTCTAGGTCCCAAGCAAAAAAATAGGTTCCCC
TaaatattaaaagttttttaagcagCACCCAGTCCTATGTCTAGTATAGA
CTTAGGTAAAAAGATCTCTAATCTCGTAATTTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025239XLOC_025239Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041238-exon-sc0002767-1491911889:6583..6654TCONS_00041238-exon-sc0002767-1491911889:6583..6654Clytia hemisphaericaexon
TCONS_00041238-exon-sc0002767-1510915933:6583..6654TCONS_00041238-exon-sc0002767-1510915933:6583..6654Clytia hemisphaericaexon
TCONS_00041238-exon-sc0002767-1575043694:6583..6654TCONS_00041238-exon-sc0002767-1575043694:6583..6654Clytia hemisphaericaexon
TCONS_00041238-exon-sc0002767-1491911889:6796..6868TCONS_00041238-exon-sc0002767-1491911889:6796..6868Clytia hemisphaericaexon
TCONS_00041238-exon-sc0002767-1510915933:6796..6868TCONS_00041238-exon-sc0002767-1510915933:6796..6868Clytia hemisphaericaexon
TCONS_00041238-exon-sc0002767-1575043694:6796..6868TCONS_00041238-exon-sc0002767-1575043694:6796..6868Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002767supercontigsc0002767:6583..6868 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041238 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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