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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041199 ID=TCONS_00041199|Name=TCONS_00041199|organism=Clytia hemisphaerica|type=transcript|length=633bp
AATAGGAGAAGTGGCAACAAGTCAAAGGACAATGGTTATCCAACGCTGTC
CTCATTCCCAACCAACTACTTCACAGAGACATACAAGAAATTTATTAACC
TTCGACCAGTCATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAGATT
TTATCGGAATACCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAGTTT
TGTGAAATTGATTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTGAGG
ACTTGAAAGGTCGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGTA
TTAATCCCTGGAGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAAT
CTCCAAAGCAGCAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCCC
GTATCCTGTATTGGGGATCTGCCGAGGTTCACAAATGATTATGCAGCTAC
TGTCGGAAGAAGAAATCCTGCGACCTTCCGACTCTAGTAAAATCACTCTG
CCCTTAATGTTCACAAAGGAAGCAAGGAAATCTCAACTTTTCGGTAAAGC
ACCCAAAGATTTGATTCGAGTTCTAAAGGAGAAGGCTTTGACGTTTAATG
CACATATTTACAGTGCACTGTATGAGAATTTTA Run BLAST on NCBI protein sequence of TCONS_00041199-protein >TCONS_00041199-protein ID=TCONS_00041199-protein|Name=TCONS_00041199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=145bp
NRRSGNKSKDNGYPTLSSFPTNYFTETYKKFINLRPVIGIVPMPLDGDKI
LSEYPVSWSKEYFGASFVKLIEMTGGRAVSISEDLKGRKLRNMLRKVNGV
LIPGGDGDLADSGYSRISKAATEYSSNKLRKESRILYWGSAEVHK Run BLAST on NCBI transcript from alignment at sc0002747:5025..7257- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041199 ID=TCONS_00041199|Name=TCONS_00041199|organism=Clytia hemisphaerica|type=transcript|length=2233bp|location=Sequence derived from alignment at sc0002747:5025..7257- (Clytia hemisphaerica)
AATAGGAGAAGTGGCAACAAGTCAAAGGACAATGGTTATCCAACGCTGTC
CTCATTCCCAACCAACTACTTCACAGAGACATACAAGAAATTTATTAACC
TTCGACCAGTCATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAGATT
TTATCGGAATACCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAGTTT
TGTGAAATTGATTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTGAGG
TAGGTTGCATTTTGATGATTATTTGGTATATTTGGTTTCACTGAAGTACT
GAAAGAAGCGGGTCAAGTTTTCATAGAAACTTTGGAAGTTCCTTTTGAGG
AGCAATGTTCTTTTGAGGAGCGCCTGATACAAGTGATTCCCATAGATTTA
TAAAGCCTGCAGGGCTAGATGTAGTGCTTTGGCTGAAAAGTGTGCCGAGG
TTATTTCACATTACAATAGAATTTCAGCGCTTGACAATAGCAGCAATATT
TTTTGCGATATTCAGTTTTTTTTTTTGCTTGAAAGAGCTTAAAGCACAAC
ATCTAGCCCTTTGGGCTTTACAGAAATTTGTAGTGATATAATTTATCGAA
GTCATAAAAAAACGCGTATCCTGATTACGTATCGTTCCTCCTTGGACGGT
TTCTTTTGGCACNTTTGCGGTTTACGGGAATATTTTTTATCAAACAGACA
CTGCGCACATAGTGTAATACGAAACGATAAACGTGAGATACATACACTCT
AGTACAGAGTATTAAAAAGCCTACGAAGCATTGAATTCGTTTACCTTTTC
TGTAATAGGAGAAGTGGCAACAAGTCAAAGGACAATGGTTATCCAACGCT
GTCCTCATTCCCAACCAACTACTTCACAGAGACATACAAGAAATTTATTA
ACCTTCGACCAGTCATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAG
ATTTTATCGGAATACCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAG
TTTTGTGAAATTGATTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTG
AGGTAGGTTGCATTTTGATGATTATTTGGTATATTTGGTTTCACTGAAGT
ACTGAAAGAAGCGGGTCAAGTTTTCATAGAAACTTTGGAAGTTCCTTTTG
AGGAGCAATGTTCTTTTGAGGAGCGCCTGATACAAGTGATTCCCATAGAT
TTATAAAGCCTGAAGGGCTTTTGGCTGAAAAGTGTGCCGAGGTTATTTCA
CATATTACAATAGAATTTCAGCGCTTGACAATAGCAGCAATATTTTTTGC
GATATTCAGTTTTTTTTTTGCTTGAAAGAGCTTAAAGCACAACATCTAGC
CCTTTGGGCTTTACAGAAATTTGTAGTGATATAATTTATCGAAGTCATAA
AAAAACGCGTATCCTGATTACGTATCGTTCCTCCTTGGACGGTTTCTTTT
GGCACTCCTTACTTTGATTGAGGACATAATCGAATCGCAGTAGTTTTCGA
TTAACTTTCAATACACTTTTTCGACTGTAGCCACCATTGCCGCGCGGGCA
TTTTTGTGTCCGTTTTACCACCCTAAAACCATCCCAGTCTTTTTTTCGCA
CCTATAGACAATCGAAAAAGGTGTACAAAATTGGATCAAGTTTAGGGGCA
CAATTAAATAATAATAAAGTGGCACGTGCCTGACCGCGCGACTACGGTGT
ATTGCCTTCCACATTCTGGATAGATCCATTTTTGTAAAAAAATTTCCAAT
TTATCACAATTATTCTCATAAACACGCGTCTAAACATTCTTCAGCTATAT
CATTACAAAAGAAGCGAAAATTTCAACATCAATCTTTCTTGATTTCTAGG
ACTTGAAAGGTCGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGTA
TTAATCCCTGGAGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAAT
CTCCAAAGCAGCAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCCC
GTATCCTGTATTGGGGATCTGCCGAGGTTCACAAATGATTATGCAGCTAC
TGTCGGAAGAAGAAATCCTGCGACCTTCCGACTCTAGTAAAATCACTCTG
CCCTTAATGTTCACAAAGGAAGCAAGGAAATCTCAACTTTTCGGTAAAGC
ACCCAAAGATTTGATTCGAGTTCTAAAGGAGAAGGCTTTGACGTTTAATG
CACATATTTACAGTGCACTGTATGAGAATTTTA Coding sequence (CDS) from alignment at sc0002747:5025..7257- >TCONS_00041199 ID=TCONS_00041199|Name=TCONS_00041199|organism=Clytia hemisphaerica|type=CDS|length=876bp|location=Sequence derived from alignment at sc0002747:5025..7257- (Clytia hemisphaerica)
GACTTGAAAGGTCGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGT
ATTAATCCCTGGAGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAA
TCTCCAAAGCAGCAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCC
CGTATCCTGTATTGGGGATCTGCCGAGGTTCACAAATGAAATAGGAGAAG
TGGCAACAAGTCAAAGGACAATGGTTATCCAACGCTGTCCTCATTCCCAA
CCAACTACTTCACAGAGACATACAAGAAATTTATTAACCTTCGACCAGTC
ATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAGATTTTATCGGAATA
CCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAGTTTTGTGAAATTGA
TTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTGAGGACTTGAAAGGT
CGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGTATTAATCCCTGG
AGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAATCTCCAAAGCAG
CAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCCCGTATCCTGTAT
TGGGGATCTGCCGAGGTTCACAAATGAAATAGGAGAAGTGGCAACAAGTC
AAAGGACAATGGTTATCCAACGCTGTCCTCATTCCCAACCAACTACTTCA
CAGAGACATACAAGAAATTTATTAACCTTCGACCAGTCATAGGAATCGTC
CCCATGCCTCTGGATGGAGATAAGATTTTATCGGAATACCCTGTATCATG
GTCTAAAGAATATTTTGGTGCCAGTTTTGTGAAATTGATTGAAATGACTG
GTGGACGAGCTGTTAGTATTTCTGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041199-exon-sc0002747-1575043694:7009..7257 | TCONS_00041199-exon-sc0002747-1575043694:7009..7257 | Clytia hemisphaerica | exon |
| TCONS_00041199-exon-sc0002747-1575043694:5025..5408 | TCONS_00041199-exon-sc0002747-1575043694:5025..5408 | Clytia hemisphaerica | exon |
| TCONS_00041199-exon-sc0002747-1510915933:7009..7257 | TCONS_00041199-exon-sc0002747-1510915933:7009..7257 | Clytia hemisphaerica | exon |
| TCONS_00041199-exon-sc0002747-1510915933:5025..5408 | TCONS_00041199-exon-sc0002747-1510915933:5025..5408 | Clytia hemisphaerica | exon |
| TCONS_00041199-exon-sc0002747-1491911889:7009..7257 | TCONS_00041199-exon-sc0002747-1491911889:7009..7257 | Clytia hemisphaerica | exon |
| TCONS_00041199-exon-sc0002747-1491911889:5025..5408 | TCONS_00041199-exon-sc0002747-1491911889:5025..5408 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002747 | supercontig | sc0002747:5025..7257 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006541 | glutamine metabolic process |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006541 |
glutamine metabolic process |
| molecular_function |
GO:0016787 |
hydrolase activity |
Blast
The following BLAST results are available for this feature:
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