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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041198 ID=TCONS_00041198|Name=TCONS_00041198|organism=Clytia hemisphaerica|type=transcript|length=633bp
AATAGGAGAAGTGGCAACAAGTCAAAGGACAATGGTTATCCAACGCTGTC
CTCATTCCCAACCAACTACTTCACAGAGACATACAAGAAATTTATTAACC
TTCGACCAGTCATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAGATT
TTATCGGAATACCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAGTTT
TGTGAAATTGATTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTGAGG
ACTTGAAAGGTCGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGTA
TTAATCCCTGGAGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAAT
CTCCAAAGCAGCAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCCC
GTATCCTGTATTGGGGATCTGCCGAGGTTCACAAATGATTATGCAGCTAC
TGTCGGAAGAAGAAATCCTGCGACCTTCCGACTCTAGTAAAATCACTCTG
CCCTTAATGTTCACAAAGGAAGCAAGGAAATCTCAACTTTTCGGTAAAGC
ACCCAAAGATTTGATTCGAGTTCTAAAGGAGAAGGCTTTGACGTTTAATG
CACATATTTACAGTGCACTGTATGAGAATTTTA Run BLAST on NCBI transcript from alignment at sc0002747:5025..6454- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041198 ID=TCONS_00041198|Name=TCONS_00041198|organism=Clytia hemisphaerica|type=transcript|length=1430bp|location=Sequence derived from alignment at sc0002747:5025..6454- (Clytia hemisphaerica)
AATAGGAGAAGTGGCAACAAGTCAAAGGACAATGGTTATCCAACGCTGTC
CTCATTCCCAACCAACTACTTCACAGAGACATACAAGAAATTTATTAACC
TTCGACCAGTCATAGGAATCGTCCCCATGCCTCTGGATGGAGATAAGATT
TTATCGGAATACCCTGTATCATGGTCTAAAGAATATTTTGGTGCCAGTTT
TGTGAAATTGATTGAAATGACTGGTGGACGAGCTGTTAGTATTTCTGAGG
TAGGTTGCATTTTGATGATTATTTGGTATATTTGGTTTCACTGAAGTACT
GAAAGAAGCGGGTCAAGTTTTCATAGAAACTTTGGAAGTTCCTTTTGAGG
AGCAATGTTCTTTTGAGGAGCGCCTGATACAAGTGATTCCCATAGATTTA
TAAAGCCTGAAGGGCTTTTGGCTGAAAAGTGTGCCGAGGTTATTTCACAT
ATTACAATAGAATTTCAGCGCTTGACAATAGCAGCAATATTTTTTGCGAT
ATTCAGTTTTTTTTTTGCTTGAAAGAGCTTAAAGCACAACATCTAGCCCT
TTGGGCTTTACAGAAATTTGTAGTGATATAATTTATCGAAGTCATAAAAA
AACGCGTATCCTGATTACGTATCGTTCCTCCTTGGACGGTTTCTTTTGGC
ACTCCTTACTTTGATTGAGGACATAATCGAATCGCAGTAGTTTTCGATTA
ACTTTCAATACACTTTTTCGACTGTAGCCACCATTGCCGCGCGGGCATTT
TTGTGTCCGTTTTACCACCCTAAAACCATCCCAGTCTTTTTTTCGCACCT
ATAGACAATCGAAAAAGGTGTACAAAATTGGATCAAGTTTAGGGGCACAA
TTAAATAATAATAAAGTGGCACGTGCCTGACCGCGCGACTACGGTGTATT
GCCTTCCACATTCTGGATAGATCCATTTTTGTAAAAAAATTTCCAATTTA
TCACAATTATTCTCATAAACACGCGTCTAAACATTCTTCAGCTATATCAT
TACAAAAGAAGCGAAAATTTCAACATCAATCTTTCTTGATTTCTAGGACT
TGAAAGGTCGTAAATTACGAAACATGTTGAGGAAAGTAAACGGAGTATTA
ATCCCTGGAGGCGACGGTGACTTAGCAGATTCTGGATACAGTAGAATCTC
CAAAGCAGCAACTGAATACTCAAGCAACAAGCTAAGAAAGGAATCCCGTA
TCCTGTATTGGGGATCTGCCGAGGTTCACAAATGATTATGCAGCTACTGT
CGGAAGAAGAAATCCTGCGACCTTCCGACTCTAGTAAAATCACTCTGCCC
TTAATGTTCACAAAGGAAGCAAGGAAATCTCAACTTTTCGGTAAAGCACC
CAAAGATTTGATTCGAGTTCTAAAGGAGAAGGCTTTGACGTTTAATGCAC
ATATTTACAGTGCACTGTATGAGAATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041198-exon-sc0002747-1575043694:6206..6454 | TCONS_00041198-exon-sc0002747-1575043694:6206..6454 | Clytia hemisphaerica | exon |
| TCONS_00041198-exon-sc0002747-1575043694:5025..5408 | TCONS_00041198-exon-sc0002747-1575043694:5025..5408 | Clytia hemisphaerica | exon |
| TCONS_00041198-exon-sc0002747-1510915933:6206..6454 | TCONS_00041198-exon-sc0002747-1510915933:6206..6454 | Clytia hemisphaerica | exon |
| TCONS_00041198-exon-sc0002747-1510915933:5025..5408 | TCONS_00041198-exon-sc0002747-1510915933:5025..5408 | Clytia hemisphaerica | exon |
| TCONS_00041198-exon-sc0002747-1491911889:6206..6454 | TCONS_00041198-exon-sc0002747-1491911889:6206..6454 | Clytia hemisphaerica | exon |
| TCONS_00041198-exon-sc0002747-1491911889:5025..5408 | TCONS_00041198-exon-sc0002747-1491911889:5025..5408 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002747 | supercontig | sc0002747:5025..6454 - |
Blast
The following BLAST results are available for this feature:
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