TCONS_00041148 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041148
Unique NameTCONS_00041148
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length328

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041148 ID=TCONS_00041148|Name=TCONS_00041148|organism=Clytia hemisphaerica|type=transcript|length=328bp
AAATCCAGTCATTTATTAATCATCCGatatataaagtttttactGCGGTT
ACAGTACAGTAAATGTAAGCCACTTTGATTTGGAAAACTAACAAAATGAA
TGACGGCGATAGTTCCTTCTCCATGGTCCCTGCATTACTATCTGGTCCCT
TCATAGATTCATAAGTCCGTAATGTTGTTCGTCAGGTCTGCCGTATTTGA
CTGTATCTTTGTTTGTGTATTTACTGATCGCGCATTTTAAACCACCAAAG
GACTTTAGCTAAAGCGACACTATACTATCTTTGATCCTCCTCTTTGTGCT
GCAGTTCAAAGTACATTTCAATTTCTAT
Run BLAST on NCBI

transcript from alignment at sc0002721:5076..5403

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041148 ID=TCONS_00041148|Name=TCONS_00041148|organism=Clytia hemisphaerica|type=transcript|length=328bp|location=Sequence derived from alignment at sc0002721:5076..5403 (Clytia hemisphaerica)
ATAGAAATTGAAATGTACTTTGAACTGCAGCACAAAGAGGAGGATCAAAG
ATAGTATAGTGTCGCTTTAGCTAAAGTCCTTTGGTGGTTTAAAATGCGCG
ATCAGTAAATACACAAACAAAGATACAGTCAAATACGGCAGACCTGACGA
ACAACATTACGGACTTATGAATCTATGAAGGGACCAGATAGTAATGCAGG
GACCATGGAGAAGGAACTATCGCCGTCATTCATTTTGTTAGTTTTCCAAA
TCAAAGTGGCTTACATTTACTGTACTGTAACCGCagtaaaaactttatat
atCGGATGATTAATAAATGACTGGATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025155XLOC_025155Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041148-exon-sc0002721-1491911889:5076..5403TCONS_00041148-exon-sc0002721-1491911889:5076..5403Clytia hemisphaericaexon
TCONS_00041148-exon-sc0002721-1510915933:5076..5403TCONS_00041148-exon-sc0002721-1510915933:5076..5403Clytia hemisphaericaexon
TCONS_00041148-exon-sc0002721-1575043694:5076..5403TCONS_00041148-exon-sc0002721-1575043694:5076..5403Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002721supercontigsc0002721:5076..5403 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.337547	0	257.338	211.841	33.7308	46.9097	5.25828	14.6544	4.64434	1.19128	0.594811	1.64725	1.38025	0.363332	0.89519	1.48658	0.888581	0.994865	0.399871	0	0.341819	1.05209	2.24055	4.28493	3.24078	0.436263	0.720214	0.337125
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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