TCONS_00041125 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041125
Unique NameTCONS_00041125
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041125 ID=TCONS_00041125|Name=TCONS_00041125|organism=Clytia hemisphaerica|type=transcript|length=1141bp
TAGGAGTTGAAATCAAGACGGTATCCCCCGAAGTATACCAAGTTGGAAAA
TCAGCAATTCTTGTCTGGAATATTACATACACAAAAGCAGAAGTTTACAA
GCATTCATTTCTGAACTTGAGTTTCAATGATACCCATTATGTACATGTTG
GTCCTAACAATAAAAAAGCCATTGAGTTGTTATGGGAACAAGGattaagt
gtactctttgacaCGAATAGTGTGGTTGTTCGAGTCCACAAGCTGAACTA
TGGAGACGTGTTGAATTGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTT
TCAAGAACATCAGTCTCACAAGAAAGACTATCTTACTTCAAAATGTGAAA
GGTGGAGTAACGAACTGCGGCGGTAAGGTGGTCCAAAAGGTTTACCAGAT
CCAAGAAAATAGATATTCTTCACATATCTCATTAACTTTATGTGGAAATC
CAACACCTTCATTAAAATACACTTGGGCTGAAGAGAGCAATGGTTTAGCG
AGGATCAATCATGATTTTGAAGATGCGAAGACAAGAAAATATCGATATAA
TATCGATTTGTATAACATTACTCGAAAACATTGTGGAAGTGAGATCCATT
TTAAAGCTTTCGGATTTAAAATATGGATGGCTTCCTCCAGATTGATGGTC
AAATATAAAGCatcaaaagtgacgaaaaattTCACCATTGTCAAATTATC
GACATTTTCCGGCACCTGTTGTACCATCTTCAAATTACCAGCACCTGAAA
CACAGTGTAAACAGACCTTTAGCATTTTCGCATACGATGTCAATAAAACC
TTAATCATGACAAAGCTGTATCATGAGGAGAATCAACTGACAAATTGTAA
TGACAAGGCCTTGTTTACACGGATCAAATTTGCAAGGATACAAGCAGTTA
GTTGGGATGGCCAGCTTGGTGAGATGTCTCAATTCTTTCAAACAACAGAC
GAAAGACAAGTGGCAGAACCATCAAAACCCAAAGAAACAAAGGCGACGAA
GATCAAAAAACCTCTATTTTCGCACACAGTTATAATAATCCTCGTTGCCA
TGGGAGCATTACTTGTTGTCATAACTTTGACCGCCATTTTGGTTTCCAAA
AATTGTCACGgaaagaaaaatgcaagagaaaatgaaggtaa
Run BLAST on NCBI

protein sequence of TCONS_00041125-protein

>TCONS_00041125-protein ID=TCONS_00041125-protein|Name=TCONS_00041125-protein|organism=Clytia hemisphaerica|type=polypeptide|length=379bp
GVEIKTVSPEVYQVGKSAILVWNITYTKAEVYKHSFLNLSFNDTHYVHVG
PNNKKAIELLWEQGLSVLFDTNSVVVRVHKLNYGDVLNCSVEAFGQTASF
KNISLTRKTILLQNVKGGVTNCGGKVVQKVYQIQENRYSSHISLTLCGNP
TPSLKYTWAEESNGLARINHDFEDAKTRKYRYNIDLYNITRKHCGSEIHF
KAFGFKIWMASSRLMVKYKASKVTKNFTIVKLSTFSGTCCTIFKLPAPET
QCKQTFSIFAYDVNKTLIMTKLYHEENQLTNCNDKALFTRIKFARIQAVS
WDGQLGEMSQFFQTTDERQVAEPSKPKETKATKIKKPLFSHTVIIILVAM
GALLVVITLTAILVSKNCHGKKNARENEG
Run BLAST on NCBI

transcript from alignment at sc0002714:7168..18264-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041125 ID=TCONS_00041125|Name=TCONS_00041125|organism=Clytia hemisphaerica|type=transcript|length=11097bp|location=Sequence derived from alignment at sc0002714:7168..18264- (Clytia hemisphaerica)
TAGGAGTTGAAATCAAGACGGTATCCCCCGAAGTATACCAAGTTGGAAAA
TCAGCAATTCTTGTCTGGAATATTACATACACAAAAGCAGAAGTTTACAA
GCATTCATTTCTGAACTTGAGTTTCAATGATACCCATTATGTACATGTTG
GTCCTAACAATAAAAAAGCCATTGAGTTGTTATGGGAACAAGGATTAAGT
GTACTCTTTGACACGAATAGTGTGGTTGTTCGAGTCCACAAGCTGAACTA
TGGAGACGTGTTGAATTGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTT
TCAAGAACATCAGTCTCACAAGAAAGACTATCTTACTTCAAAATGTGAAA
GGTATTAACTTGAATTAAGTACAGAATCCCATGGGGATCTTTGCACACTT
GAATTGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTTTCAAGAAAATCA
GTCTCACAAGAAAGGCTATCTTCCTTCAAAATGTGAAAGGTATTAACTTG
AATTAAGTGCAGAATCCCATGGGGATCTTTGCACACTTGAATTGCTCTGT
TGAGGCTTTTGGCCAGACAGCGTCTTTCAAGAACATCAGTCTCGCAAGAA
AGACTATCTTACTTCAAAATGTGAAAGGTACTAACTTGAATTAAGTGCAG
AATCCCATGCGGATCTTTGCACACTTGAATTGCTCTGTTGAGGCTTTTGG
CCAGACAGCGTCTTTCAAGAACATCAGTCTCACAAGAAAGACTATCTTAC
TTCAAAATGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCTTACTTCAAAATGTGAAAGGTATT
AACTTGAATTAAGTGCAGAATCCCATGGGGATCTTTGCACACTTGAATTG
CTCTGTTGAGGCTTTTGGCCAGACAGCATCTTTCAAGAACATCATTCTCA
CAAAAAAGACTATCTTACTTCAAAATGTGAAAGGTATTAACTTGAATTAA
GTGCAGAATCCCATGAGGATCTTTGCACAATTGAATTGCTCTGTTGAGGC
TTTTGGCCAGACAGCGTCTTTCAAGAACATCAGTCTCACAAGAAAGACTA
TCTTACTTCAAAATGTGAAAGGTATTAACTTGAATTAAGTGCAGAATCCC
ATGAGGATCTTTGCACAATTGAATTGCTCTGTTGAGGCTTTTGGCCAGAC
AGCGTCTTTCAAGAACATCAGTCTCACAAGAAAGACTATCTTACTTCAAA
ATGTGAAAGGTATTAACTTGAATTAAGTGCAGAATCCCATGAGGATCTTT
GCACAATTGAATTGCTCTGTTGAGGCTTTTGGCCAGACAGCGTCTTTCAA
GAAAGACTATCTTACTTCAAAATGTGAAAGGTATTAACTTGAATTAAGTG
CAGAATCCCATGGGGATCTTTGCACACTCGAATTGCTCTGTTGAGGCTTT
TAGCCAGACAGCATCTTTCAAGAACATCAGTCTCACAAGAAAGACTATCT
TACTTCAAAATGTGAAAGGTATTAACTTGAATTAAGTGCAGAATCCCATG
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGTTG
AGGCTTTTGGCCAGACCGCGTCTTTCAAGAACATCAGTCTCACAAGAAAG
ACTATCTTACTTCAAAATGTGAAAGGTACTTACTTGAATTAAGTGCAGAA
TCCCATGGGGATCTTTGCACACTTGAATTGCTCTGTTGAGGCTTTTGGCC
AGACCGCGTCTTTCAAGAACATCAGTCTCACAAAAAAGACCATCTTACTT
CAAAATGTGAAAGGTATTAACTTGACTTACTTGAATTAAGTGCAGAATCC
CATGGGGATCTTTGCACACTTGAATTGCTCTGTTGAGGCTTTTGGCCAGA
CAGCGTTTTTCAAGAACATCAGTCTCACAAAAAAGACTATCTTACTTCAA
AATGTGAAAGGTATTAACTTGAATTAAGTGCAGAATCCCATGGGGATCTT
TGCACACTTGAATTGCTCTGTTGAGGCTTTTGGCCAGACAGCGTCTTTCA
AGAACATCAGTCTCACAAAAAAGACTATCTTACTTCAAAATGTGAAAGGT
ATTAACTTGACTTACTTGAATTAAGTGCAGAATCCCATGGGGATCTTTGC
ACACTTGAATTGCTCTGTTGAGGCTTTTGGCCAGACAGCGTCTTTCAAGA
ACATCAGTCTCACAAAAAAGACTATCTTCCTTCAAAATGTGAAAGGTATT
AACTTGAATTAAGTACAGAATCCCATGGGGATCTTTGCACACTTGAATTG
CTCTGTTGAGGCTTTTGGCCAGACAGCGTCTTTCAAGAATATCAGTCTCA
CAAGAAAGACTATCTTACTTCAAAATGTGAAAGGTATTAACTTGACTTAC
TTGAATTAAGTGCATAATCGCACGGGGATCTTTGCACACTCCTTGGAGAC
AAACTCTTTCCACTTTTCTCTGTTACGGGCACGGCGCTCAGCAGTAGGAA
GTGGGATCCCTGTGTCTTCTTGGATTAGATCGCTCCATATTTTAGGGGGA
CGTCCACGAAGTATGAAGAATTCACACTCATGCGCGTACCACAGATACGA
TTTTAGAAGGGATGATGCATAATGTACTTGACCCAAAACCTCTTAAGCAA
TTAACAGAAAATTCTCCCCTTTGAGGCCGGGATTCAGTCAACTCTTCCCA
CATTCCTTTACCACCCTCTCGTCACGTCAGGATCGGTAAATCAAGGCACT
ATTTGATCAAACCACAGATATCTATCATATTCTTTTACACACTAGATAGG
TTAACTGCTTACAGTGTCCAGTTTTGAAGTCAACTAGTCTACCATGTTGT
TTTTCATTTAATCTTAGATTTTGGAACGTTCGAATTTCAAAACATTCGAA
TCGCGCTGTTGACGACAAGAATTGAAAACAACACGGCGCTTTAGGCAACT
TTTAAATTGGAACACGCTTCCTTTTATATGGGAAGCCCGACCCAGTCACT
TAGTTAGACTAGTGGATTAAAACCATCATTTGTTAAACCTTGAAAATAAA
TGATGTATCCCTTAAGTATTTTATATAACTTTCTTTAACAACTTAAACAA
GCTCTGATATCACTGAGCACTTTCTGCAGATAGAAGAAAATAGACTTGTA
TTACTATTTTAATATTTGTATTTAAGGTGGAGTAACGAACTGCGGCGGTA
AGGTGGTCCAAAAGGTTTACCAGATCCAAGAAAATAGATATTCTTCACAT
ATCTCATTAACTTTATGTGGAAATCCAACACCTTCATTAAAATACACTTG
GGCTGAAGAGAGCAATGGTTTAGCGAGGATCAATCATGATTTTGAAGATG
CGAAGACAAGAAAATATCGATATAATATCGATTTGTATAACATTACTCGA
AAACATTGTGGAAGTGAGATCCATTTTAAAGCTTTCGGATTTAAAATATG
GATGGCTTCCTCCAGATTGATGGTCAAATGTGAGTATTCTGCATCACTGC
AATGTCTTCTGCATCACTGCAATGTCTTCTACATCACTGCAATGTCTTTT
GCATCACTACAATGTCTTTTGCATCACTGCAATGTCTTTTGCGTCACTGC
AATGTCTTCTGCATCACTGCAATGTCTTCTGCATCACTGCAATGTCTTCT
GCATCACTGCAATGTCTTCTGCATCACTGCAATGTCTTTTGCATCACCCA
ACGGCTGATTGGTTGCAAGTGACGTATTGACGGGTTTTACGTCACTTACA
ACCAATCAGCTGTTTGGTCCGTGATGTAATGTTAGAAGATATTGCAGTGA
TGCATATCATGAATTCATGATATGCGCATCACTGCAATGTCTTCTGCATC
ATCCAACAGATGATAGCTGATTAGTTGTAAGTGACGTAAAATAAGTCAAT
ACGTCACTTGCAGCCAATCAGCTGTTGGGTCTATGATGTAATGTTAGAAG
ACATTGCACTGGTGCATATTATGAATTTTAGTGTACGTAATGGTCGAAAC
TCTATCGCATAATTATTACTATTTTTTCGGATTCGATTCGTTCGATTGAT
AGAGAACAAAAACAGCAATCGAGCCCATAGAATCAGATAGAATTTCATTT
TTAAAGATTTCTAAAACTATTCGATTCAGTTTCGATTGCGATCGATTGCA
ATCAGTTTGGTTCGATTGATTCAAAATTGAAAGTTCTGCTTACATTCTTT
TATAAGAAAAACTTTATAAGAACAAGAAGGCTAAAAAAATGTCAAAGTAT
AAGAAAAAAGCAGAACCGTGAAAGGCTGAGTTATACCTTAAGAGATGTCA
GAAAGAAAAGACACTGACATCGCTCTACTTATTTATCGNACCTTAAGAGA
TGTCAGAAAGAAAAGACACTGACATCGCTCTACTTATGTATCAAGCACTG
TAAAAGACTGAAGGATTACTTACCTTAAGGGGTGTAATTTTTGCAATAAC
TGATTTTCGTGGAACTTACATTCGTGTTGCGAGGGCTGGAGATTTTTTGC
GCTTGACACCCACTTTTTGTCGAAATTCTTTCCTATGAGTTACAAGAATT
TATAGTAAAAATTGCATTTCACGGAACTAATTTTCACAGTACACACCCAA
AAACGCGAAAATTTGTTTCGCGAAAATAATTTCCGCGAAAAATAGGTGAG
CAAAATAAGGACCGAATAAATAAAAATGTGATATAAAATTCTAAAATACC
CCAATTTTGCCCTAGAAATAAGAACATGATTAAAGAACAATTTTAGGCTC
AAAATGCAAAAAAGAAAGAAGGGGTGGGCAAAGATTCTGAAGCCTTCGGA
TGTTCTTAACTTTTTTAGTTTTAAGGTCAAAAATTGTTCTTATTTTCACC
GTTTTCTGAGTATTTTTGCCCATTCTCCTAAGAAATAAGGTGTTTACGAG
TCCACATAGCCTTAAAATGTTCTTAACCTATTTCCTTAACATTTTGGCCA
TCGAATCCTTATGTTCTTATATAGTTTGTTCTTATTTTACTATTGGGAAT
TGAGATATTTATGAACTAGCTATACAAACTCTCATGCAAAGATTTCCTTC
GATTTTGTGAGTATTTTTGGGTATTAGTCCACAAAGTCTTAAAATGTTCT
TAACGTGTTTCCTTAAAATATTTTGNGATTTTTGGGTATTAGTCCACAAA
GCCTTAAAATGCTCTTAACGTATTTCCTTTAAATATTTTAGCCATCGAAT
CCTCATGTTCTTATAAAAACGTGTATTCACTAACCTTTAGATAAAGCATC
AAAAGTGACGAAAAATTTCACCATTGTCAAATTATCGACATTTTCCGGCA
CCTGTTGTACCATCTTCAAATTACCAGCACCTGAAACACAGTGTAAACAG
ACCTTTAGCATTTTCGCATACGATGTCAATAAAACCTTAATCATGACAAA
GCTGTATCATGAGGAGAATCAACTGACAAATTGTAATGACAAGGCCTTGT
TTACACGGATCAAATTTGCAAGGATACAAGCAGTTAGTTGGGATGGCCAG
CTTGGTGAGATGTCTCAATTCTTTCAAACAACAGACGAAAGACAAGGTAG
TTTTAAGACTTCGATAGATACACTGTTTTTTTATAAGAACATCCAAAATT
TTTGAAGCCGTCGGATGTTCTTAAGTTTTTGAGTATTAAGCCTTTAAATG
TTCTTAACATGTTTTTATTTTCTTCATTTTTGAGTATTTTTGTCAATTTT
CTTCAGAAATTGGGTGTTTTAGAGTTCGCGAAGCCCTAAAATGTTCTTAA
TTTGTTCTTGATATTTTGGTCATCAAAACCTTATGGTCTTATATAGTTTG
TTCTTATAAAATGGCGACCTCGTCAAATGCTTCAAATACTTCACTGGACT
CAGCATCATGAAAAATTATCAAAAAGCAAAAATCAGCAAGAAGTAGACTA
TAGTCTAATAAAACCATTGAGTAAGTTTACCGGCCGTCTTTGATCGGAGT
TTTTTTGAAAGGTACCCACAAAGAAGGCAATACAGTGCTACATCATAAGT
ATCAGAGCCCCCCCCCAGTTGTTTGCGTGAATGCATCGACCTCTAACGGG
AATGCGTGAATGGGCTTTTTCATTTGCGAAAATGCGTGAAAATTAAAAAA
AAGCTGCGTAAAGTCGTGAATTGGAAAATGTTGCGTGAACAGAAATAGTG
TGAATTTTGAAAATTGTGTGAAGGTGTGAAATTTGGAAAAGAAATTGCTC
GTCGAAGAGAAAATAGATCTAACGCTCTCTCCGATTAGGGGTTCCCCTTT
TGAAAAATAAATCGATCAAAGATCTTAGTTGGTTGGGATTGAGAATACCT
CCAGACCCCCAGTGTTTATCAACAATACAATGAATTTTTTTAATCTTGTT
TGCAGTGGCAGAACCATCAAAACCCAAAGAAACAAAGGCGACGAAGATCA
AAAAACCTCTATTTTCGCACACAGTTATAATAATCCTCGTTGCCATGGGA
GCATTACTTGTTGTCATAACTTTGACCGCCATTTTGGTTTCCAAAAATTG
TCACGGTAAGTTACGGCAGTTTTTGAGGAGCATATAAAAGCATTGGCGGT
CTGATTAGAAAACCAAACGCTACTTAAAACACAATGCTAATTTTTTTTCT
AAAGGTCCGGCTGTAATTTGCAGGTTTTTTAACTATTTCTATTTTCTAAA
TCTTCTAAATATGCTAACTGTGCTTATTGACTTATTTCGAGAAAACTTAA
CATGAGATTTTTTGTTTCTTTGAACGTGACCGTGATACAGTAGACGCTTG
CTAATTCGAACTAACTGCTACTCGAATCTTACTATAATAGACCTTTTCAT
AAATTACGTTACAAACATCACTTGCCTCGTTTTGAAATTATTGCCATGGT
GATTAACTCCTAGCGGATTTTATTAAAACTACTTCCTATTCATAAAAAAA
TCATTTAATGTCTCAAGAGACATAATCACTATAGTAATTGTTTGAATACG
AGGCAAGTGATGTTCGTGACGTAATTTATGAAAAGGTTTATTCGAATTTA
TTCTCAGTGTCCATCAAGAAGAAATCCTTGAATAACGGTTCTTATAACTC
GAGTCGCGATTCGAATTTTCCATTGTTCTCGAATAGATTGGACTACAGTC
GACTCTCATTAATTCGAACTCAAACAGGGAATCTTATTTGTTCGAATAAC
AGAGAGACTCGAGTTATAGAGAGTACTTTGTGAGGGTTTCTCCCTTACGG
GAACTGAGAATAAGTCCGAATTATAGAAAGATTTGAATNGGGTTTCTCCC
TGACGGGAACTGAGAATAAGTCCGAATTATAGAAATGATTTGAATAATAT
AGGTTCGATTCAGCGATTTGAAGCGAGTTTTTAAGCATGAGTGAGTAAGA
GAACCTTTATATGTCTAGGATTGAACTTTCCTTTATTGAATTACAAGCTG
CCAGCGAAAAAGTCATGAAAAAGTTTACCAATTCTTNTGTCTAGGATTGA
ACTTTCCTTTATTGAATTACAACCTGCTAGCGAAAAAGTTTACCAATTCT
TTCTTAATTTTTTTAGGAAAGAAAAATGCAAGAGAAAATGAAGGTAA

Coding sequence (CDS) from alignment at sc0002714:7168..18264-

>TCONS_00041125 ID=TCONS_00041125|Name=TCONS_00041125|organism=Clytia hemisphaerica|type=CDS|length=5685bp|location=Sequence derived from alignment at sc0002714:7168..18264- (Clytia hemisphaerica)
GAAAGAAAAATGCAAGAGAAAATGAAGGTTGGCAGAACCATCAAAACCCA
AAGAAACAAAGGCGACGAAGATCAAAAAACCTCTATTTTCGCACACAGTT
ATAATAATCCTCGTTGCCATGGGAGCATTACTTGTTGTCATAACTTTGAC
CGCCATTTTGGTTTCCAAAAATTGTCACGATAAAGCATCAAAAGTGACGA
AAAATTTCACCATTGTCAAATTATCGACATTTTCCGGCACCTGTTGTACC
ATCTTCAAATTACCAGCACCTGAAACACAGTGTAAACAGACCTTTAGCAT
TTTCGCATACGATGTCAATAAAACCTTAATCATGACAAAGCTGTATCATG
AGGAGAATCAACTGACAAATTGTAATGACAAGGCCTTGTTTACACGGATC
AAATTTGCAAGGATACAAGCAGTTAGTTGGGATGGCCAGCTTGGTGAGAT
GTCTCAATTCTTTCAAACAACAGACGAAAGACAAGGTGGAGTAACGAACT
GCGGCGGTAAGGTGGTCCAAAAGGTTTACCAGATCCAAGAAAATAGATAT
TCTTCACATATCTCATTAACTTTATGTGGAAATCCAACACCTTCATTAAA
ATACACTTGGGCTGAAGAGAGCAATGGTTTAGCGAGGATCAATCATGATT
TTGAAGATGCGAAGACAAGAAAATATCGATATAATATCGATTTGTATAAC
ATTACTCGAAAACATTGTGGAAGTGAGATCCATTTTAAAGCTTTCGGATT
TAAAATATGGATGGCTTCCTCCAGATTGATGGTCAAATGGAGTTGAAATC
AAGACGGTATCCCCCGAAGTATACCAAGTTGGAAAATCAGCAATTCTTGT
CTGGAATATTACATACACAAAAGCAGAAGTTTACAAGCATTCATTTCTGA
ACTTGAGTTTCAATGATACCCATTATGTACATGTTGGTCCTAACAATAAA
AAAGCCATTGAGTTGTTATGGGAACAAGGATTAAGTGTACTCTTTGACAC
GAATAGTGTGGTTGTTCGAGTCCACAAGCTGAACTATGGAGACGTGTTGA
ATTGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTTTCAAGAACATCAGT
CTCACAAGAAAGACTATCTTACTTCAAAATGTGAAAGGAAAGAAAAATGC
AAGAGAAAATGAAGGTTGGCAGAACCATCAAAACCCAAAGAAACAAAGGC
GACGAAGATCAAAAAACCTCTATTTTCGCACACAGTTATAATAATCCTCG
TTGCCATGGGAGCATTACTTGTTGTCATAACTTTGACCGCCATTTTGGTT
TCCAAAAATTGTCACGATAAAGCATCAAAAGTGACGAAAAATTTCACCAT
TGTCAAATTATCGACATTTTCCGGCACCTGTTGTACCATCTTCAAATTAC
CAGCACCTGAAACACAGTGTAAACAGACCTTTAGCATTTTCGCATACGAT
GTCAATAAAACCTTAATCATGACAAAGCTGTATCATGAGGAGAATCAACT
GACAAATTGTAATGACAAGGCCTTGTTTACACGGATCAAATTTGCAAGGA
TACAAGCAGTTAGTTGGGATGGCCAGCTTGGTGAGATGTCTCAATTCTTT
CAAACAACAGACGAAAGACAAGGTGGAGTAACGAACTGCGGCGGTAAGGT
GGTCCAAAAGGTTTACCAGATCCAAGAAAATAGATATTCTTCACATATCT
CATTAACTTTATGTGGAAATCCAACACCTTCATTAAAATACACTTGGGCT
GAAGAGAGCAATGGTTTAGCGAGGATCAATCATGATTTTGAAGATGCGAA
GACAAGAAAATATCGATATAATATCGATTTGTATAACATTACTCGAAAAC
ATTGTGGAAGTGAGATCCATTTTAAAGCTTTCGGATTTAAAATATGGATG
GCTTCCTCCAGATTGATGGTCAAATGGAGTTGAAATCAAGACGGTATCCC
CCGAAGTATACCAAGTTGGAAAATCAGCAATTCTTGTCTGGAATATTACA
TACACAAAAGCAGAAGTTTACAAGCATTCATTTCTGAACTTGAGTTTCAA
TGATACCCATTATGTACATGTTGGTCCTAACAATAAAAAAGCCATTGAGT
TGTTATGGGAACAAGGATTAAGTGTACTCTTTGACACGAATAGTGTGGTT
GTTCGAGTCCACAAGCTGAACTATGGAGACGTGTTGAATTGCTCTGTTGA
GGCTTTTGGCCAGACCGCGTCTTTCAAGAACATCAGTCTCACAAGAAAGA
CTATCTTACTTCAAAATGTGAAAGGAAAGAAAAATGCAAGAGAAAATGAA
GGTTGGCAGAACCATCAAAACCCAAAGAAACAAAGGCGACGAAGATCAAA
AAACCTCTATTTTCGCACACAGTTATAATAATCCTCGTTGCCATGGGAGC
ATTACTTGTTGTCATAACTTTGACCGCCATTTTGGTTTCCAAAAATTGTC
ACGATAAAGCATCAAAAGTGACGAAAAATTTCACCATTGTCAAATTATCG
ACATTTTCCGGCACCTGTTGTACCATCTTCAAATTACCAGCACCTGAAAC
ACAGTGTAAACAGACCTTTAGCATTTTCGCATACGATGTCAATAAAACCT
TAATCATGACAAAGCTGTATCATGAGGAGAATCAACTGACAAATTGTAAT
GACAAGGCCTTGTTTACACGGATCAAATTTGCAAGGATACAAGCAGTTAG
TTGGGATGGCCAGCTTGGTGAGATGTCTCAATTCTTTCAAACAACAGACG
AAAGACAAGGTGGAGTAACGAACTGCGGCGGTAAGGTGGTCCAAAAGGTT
TACCAGATCCAAGAAAATAGATATTCTTCACATATCTCATTAACTTTATG
TGGAAATCCAACACCTTCATTAAAATACACTTGGGCTGAAGAGAGCAATG
GTTTAGCGAGGATCAATCATGATTTTGAAGATGCGAAGACAAGAAAATAT
CGATATAATATCGATTTGTATAACATTACTCGAAAACATTGTGGAAGTGA
GATCCATTTTAAAGCTTTCGGATTTAAAATATGGATGGCTTCCTCCAGAT
TGATGGTCAAATGGAGTTGAAATCAAGACGGTATCCCCCGAAGTATACCA
AGTTGGAAAATCAGCAATTCTTGTCTGGAATATTACATACACAAAAGCAG
AAGTTTACAAGCATTCATTTCTGAACTTGAGTTTCAATGATACCCATTAT
GTACATGTTGGTCCTAACAATAAAAAAGCCATTGAGTTGTTATGGGAACA
AGGATTAAGTGTACTCTTTGACACGAATAGTGTGGTTGTTCGAGTCCACA
AGCTGAACTATGGAGACGTGTTGAATTGCTCTGTTGAGGCTTTTGGCCAG
ACCGCGTCTTTCAAGAACATCAGTCTCACAAGAAAGACTATCTTACTTCA
AAATGTGAAAGGAAAGAAAAATGCAAGAGAAAATGAAGGTTGGCAGAACC
ATCAAAACCCAAAGAAACAAAGGCGACGAAGATCAAAAAACCTCTATTTT
CGCACACAGTTATAATAATCCTCGTTGCCATGGGAGCATTACTTGTTGTC
ATAACTTTGACCGCCATTTTGGTTTCCAAAAATTGTCACGATAAAGCATC
AAAAGTGACGAAAAATTTCACCATTGTCAAATTATCGACATTTTCCGGCA
CCTGTTGTACCATCTTCAAATTACCAGCACCTGAAACACAGTGTAAACAG
ACCTTTAGCATTTTCGCATACGATGTCAATAAAACCTTAATCATGACAAA
GCTGTATCATGAGGAGAATCAACTGACAAATTGTAATGACAAGGCCTTGT
TTACACGGATCAAATTTGCAAGGATACAAGCAGTTAGTTGGGATGGCCAG
CTTGGTGAGATGTCTCAATTCTTTCAAACAACAGACGAAAGACAAGGTGG
AGTAACGAACTGCGGCGGTAAGGTGGTCCAAAAGGTTTACCAGATCCAAG
AAAATAGATATTCTTCACATATCTCATTAACTTTATGTGGAAATCCAACA
CCTTCATTAAAATACACTTGGGCTGAAGAGAGCAATGGTTTAGCGAGGAT
CAATCATGATTTTGAAGATGCGAAGACAAGAAAATATCGATATAATATCG
ATTTGTATAACATTACTCGAAAACATTGTGGAAGTGAGATCCATTTTAAA
GCTTTCGGATTTAAAATATGGATGGCTTCCTCCAGATTGATGGTCAAATG
GAGTTGAAATCAAGACGGTATCCCCCGAAGTATACCAAGTTGGAAAATCA
GCAATTCTTGTCTGGAATATTACATACACAAAAGCAGAAGTTTACAAGCA
TTCATTTCTGAACTTGAGTTTCAATGATACCCATTATGTACATGTTGGTC
CTAACAATAAAAAAGCCATTGAGTTGTTATGGGAACAAGGATTAAGTGTA
CTCTTTGACACGAATAGTGTGGTTGTTCGAGTCCACAAGCTGAACTATGG
AGACGTGTTGAATTGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTTTCA
AGAACATCAGTCTCACAAGAAAGACTATCTTACTTCAAAATGTGAAAGGA
AAGAAAAATGCAAGAGAAAATGAAGGTTGGCAGAACCATCAAAACCCAAA
GAAACAAAGGCGACGAAGATCAAAAAACCTCTATTTTCGCACACAGTTAT
AATAATCCTCGTTGCCATGGGAGCATTACTTGTTGTCATAACTTTGACCG
CCATTTTGGTTTCCAAAAATTGTCACGATAAAGCATCAAAAGTGACGAAA
AATTTCACCATTGTCAAATTATCGACATTTTCCGGCACCTGTTGTACCAT
CTTCAAATTACCAGCACCTGAAACACAGTGTAAACAGACCTTTAGCATTT
TCGCATACGATGTCAATAAAACCTTAATCATGACAAAGCTGTATCATGAG
GAGAATCAACTGACAAATTGTAATGACAAGGCCTTGTTTACACGGATCAA
ATTTGCAAGGATACAAGCAGTTAGTTGGGATGGCCAGCTTGGTGAGATGT
CTCAATTCTTTCAAACAACAGACGAAAGACAAGGTGGAGTAACGAACTGC
GGCGGTAAGGTGGTCCAAAAGGTTTACCAGATCCAAGAAAATAGATATTC
TTCACATATCTCATTAACTTTATGTGGAAATCCAACACCTTCATTAAAAT
ACACTTGGGCTGAAGAGAGCAATGGTTTAGCGAGGATCAATCATGATTTT
GAAGATGCGAAGACAAGAAAATATCGATATAATATCGATTTGTATAACAT
TACTCGAAAACATTGTGGAAGTGAGATCCATTTTAAAGCTTTCGGATTTA
AAATATGGATGGCTTCCTCCAGATTGATGGTCAAATGGAGTTGAAATCAA
GACGGTATCCCCCGAAGTATACCAAGTTGGAAAATCAGCAATTCTTGTCT
GGAATATTACATACACAAAAGCAGAAGTTTACAAGCATTCATTTCTGAAC
TTGAGTTTCAATGATACCCATTATGTACATGTTGGTCCTAACAATAAAAA
AGCCATTGAGTTGTTATGGGAACAAGGATTAAGTGTACTCTTTGACACGA
ATAGTGTGGTTGTTCGAGTCCACAAGCTGAACTATGGAGACGTGTTGAAT
TGCTCTGTTGAGGCTTTTGGCCAGACCGCGTCTTTCAAGAACATCAGTCT
CACAAGAAAGACTATCTTACTTCAAAATGTGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025134XLOC_025134Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041125-exon-sc0002714-1575043694:17914..18264TCONS_00041125-exon-sc0002714-1575043694:17914..18264Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1575043694:11236..11538TCONS_00041125-exon-sc0002714-1575043694:11236..11538Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1575043694:9169..9474TCONS_00041125-exon-sc0002714-1575043694:9169..9474Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1575043694:8210..8359TCONS_00041125-exon-sc0002714-1575043694:8210..8359Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1575043694:7168..7198TCONS_00041125-exon-sc0002714-1575043694:7168..7198Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1510915933:17914..18264TCONS_00041125-exon-sc0002714-1510915933:17914..18264Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1510915933:11236..11538TCONS_00041125-exon-sc0002714-1510915933:11236..11538Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1510915933:9169..9474TCONS_00041125-exon-sc0002714-1510915933:9169..9474Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1510915933:8210..8359TCONS_00041125-exon-sc0002714-1510915933:8210..8359Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1510915933:7168..7198TCONS_00041125-exon-sc0002714-1510915933:7168..7198Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1491911889:17914..18264TCONS_00041125-exon-sc0002714-1491911889:17914..18264Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1491911889:11236..11538TCONS_00041125-exon-sc0002714-1491911889:11236..11538Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1491911889:9169..9474TCONS_00041125-exon-sc0002714-1491911889:9169..9474Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1491911889:8210..8359TCONS_00041125-exon-sc0002714-1491911889:8210..8359Clytia hemisphaericaexon
TCONS_00041125-exon-sc0002714-1491911889:7168..7198TCONS_00041125-exon-sc0002714-1491911889:7168..7198Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041125-proteinTCONS_00041125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002714supercontigsc0002714:7168..18264 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.310089	0.177976	0.587282	0.784611	0.230348	0	0.15713	0.0779801	3.5875	2.68431	0.191753	0	0	0.0712004	5.53729	5.27876	0	0.053856	0	0	0.22834	0.865591	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041125 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top