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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041108 ID=TCONS_00041108|Name=TCONS_00041108|organism=Clytia hemisphaerica|type=transcript|length=1709bp
ACAAAATTAGGGGGAAACCCAGGGGGAAATTAAAATCGACaccaagtttg
aaaaaaaaaaaccgatATCATGTTTGACGTTTgacacaaaaaagaaaaat
taacaaaagaagctttcagaagaaaaatatcgttgaaaaaaatactaaat
aaacCAACGTTCAATGTCTCATAGTTTCTTTAGTTCATTGTAAATCTTTC
TCTTGGTTTTCCCAACTCTTCTCTGAAGATTCATTTTCGTCTGTAGGTTC
ATCCATCGGCTCAATTTCTTTCATGCCAAGCATGCGGCAGTATTCGTTGC
ATTTGTGTTCTTTTCTGAACCTTTGGAAAGCAATCAACGATAAGTTGCCT
GAACAAAAGTAAAACTCGGAATCTTCGTCCTGGTGAACGAGGGTTGAAAT
TTCTGGATCGTATAACTTAAAAATCGACCCTTGTATATCAGTAAGGATGA
TTTTTCCATCTGAAATGTGAATAGAAAAGTGCACCAAGGTCTGTGCCTTT
TGGTAAATGAAAGCGGCTTCTTCTGTATGGTTTGGAAAGCAGTTTCCATC
GTTGTTAAcatatttcagaaaaaatccaGGAATGAATTCTTCCAAAGTGA
CGGGCTCTCCGTTAAGCAACCCAAAGTAAACTCTCTCATACACGAAAATG
TCACCGAACTTGACATCTTTCAGCTCTTTGGCTTTCTTAGCCATTCTCTG
TGCTATGTTCCGGGCTACAGAATGCATTTGGCACTGCTTCCTTGCATGTT
CGGTTACTGTTGTGTTGagaaatttcattgttttttttgagGATTGGAGA
TATTTCTTGACAACCCATTCCTTTTTCGTATCACAGTCGACAGCTTTGAA
GGCTTTTCGAAAAGCACCCTCTCCAAACGATTTATCCTCTATTTCAAGAC
TCATATCTTTCATTTTCACCCATTCGTCAATTTCTAGGGAATAATATTCC
AGAGTTATCTTTTCAATCTTCTTCGGCTTTTTCAGTTTTCCAGCCTTGAG
TAACGTTGCAATGGAGACAGATTTGGCAAATTGCGACTTTGGAGGAGGTG
GAGGGATAGCGGGTGGAGGGATAGGTGCACTTGCTTCGACATCATCTTGT
TGATCCTCTACTGGGAATTCTCTAGTGCCACTACTAACACGATTTACATT
AAGATTTCGACTGTTAAATTGCTCGTCGGTAAATCTTACCAGAAATGACT
TCTTTCCTTTGATCTGATCAGTTCGCTGTACGGATGGTCCAGAGTTAGTA
ACGAGAACATCACAAGTACCTGCTGGCATCTGGTAGTAGGCTTCACACGC
AGCTTTGATATTTTCAAGCGTAAGTTCATAAAATTCATTAAATGGGACGA
ACCGTTTAACATCTTGTACTTCGTATTTCTTGTTTCTGGGATTGGTTGCA
GAAGACATTACTTGCACAGTTAAATCTTTCGGCGCTGGAGATTCAGTTTT
CTTCCCGGTGCGTTTAGTGGATTGCTCCATTTCAAAAGCTGCAAATGCAT
CCTTGTTACCGCGACGTTTCGCCATTTTTCTTGATTCACGTTTTCTTTCA
CCGAGAGTGCGTTGTACTTTGAGAGCCATACAAGATAACATAACTTCATG
AAGCAAGGGGAAAACAATAAGGAAAATTACGTAACCTCACCAAATAAGGA
GAAATTATTGTTCAAATTTCAAAGATAAATCCTCGGCCAATCGACTAAAA
GAAACACAA Run BLAST on NCBI protein sequence of TCONS_00041108-protein >TCONS_00041108-protein ID=TCONS_00041108-protein|Name=TCONS_00041108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=468bp
MLSCMALKVQRTLGERKRESRKMAKRRGNKDAFAAFEMEQSTKRTGKKTE
SPAPKDLTVQVMSSATNPRNKKYEVQDVKRFVPFNEFYELTLENIKAACE
AYYQMPAGTCDVLVTNSGPSVQRTDQIKGKKSFLVRFTDEQFNSRNLNVN
RVSSGTREFPVEDQQDDVEASAPIPPPAIPPPPPKSQFAKSVSIATLLKA
GKLKKPKKIEKITLEYYSLEIDEWVKMKDMSLEIEDKSFGEGAFRKAFKA
VDCDTKKEWVVKKYLQSSKKTMKFLNTTVTEHARKQCQMHSVARNIAQRM
AKKAKELKDVKFGDIFVYERVYFGLLNGEPVTLEEFIPGFFLKYVNNDGN
CFPNHTEEAAFIYQKAQTLVHFSIHISDGKIILTDIQGSIFKLYDPEIST
LVHQDEDSEFYFCSGNLSLIAFQRFRKEHKCNEYCRMLGMKEIEPMDEPT
DENESSEKSWENQEKDLQ Run BLAST on NCBI transcript from alignment at sc0002707:3648..5356 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041108 ID=TCONS_00041108|Name=TCONS_00041108|organism=Clytia hemisphaerica|type=transcript|length=1709bp|location=Sequence derived from alignment at sc0002707:3648..5356 (Clytia hemisphaerica)
TTGTGTTTCTTTTAGTCGATTGGCCGAGGATTTATCTTTGAAATTTGAAC
AATAATTTCTCCTTATTTGGTGAGGTTACGTAATTTTCCTTATTGTTTTC
CCCTTGCTTCATGAAGTTATGTTATCTTGTATGGCTCTCAAAGTACAACG
CACTCTCGGTGAAAGAAAACGTGAATCAAGAAAAATGGCGAAACGTCGCG
GTAACAAGGATGCATTTGCAGCTTTTGAAATGGAGCAATCCACTAAACGC
ACCGGGAAGAAAACTGAATCTCCAGCGCCGAAAGATTTAACTGTGCAAGT
AATGTCTTCTGCAACCAATCCCAGAAACAAGAAATACGAAGTACAAGATG
TTAAACGGTTCGTCCCATTTAATGAATTTTATGAACTTACGCTTGAAAAT
ATCAAAGCTGCGTGTGAAGCCTACTACCAGATGCCAGCAGGTACTTGTGA
TGTTCTCGTTACTAACTCTGGACCATCCGTACAGCGAACTGATCAGATCA
AAGGAAAGAAGTCATTTCTGGTAAGATTTACCGACGAGCAATTTAACAGT
CGAAATCTTAATGTAAATCGTGTTAGTAGTGGCACTAGAGAATTCCCAGT
AGAGGATCAACAAGATGATGTCGAAGCAAGTGCACCTATCCCTCCACCCG
CTATCCCTCCACCTCCTCCAAAGTCGCAATTTGCCAAATCTGTCTCCATT
GCAACGTTACTCAAGGCTGGAAAACTGAAAAAGCCGAAGAAGATTGAAAA
GATAACTCTGGAATATTATTCCCTAGAAATTGACGAATGGGTGAAAATGA
AAGATATGAGTCTTGAAATAGAGGATAAATCGTTTGGAGAGGGTGCTTTT
CGAAAAGCCTTCAAAGCTGTCGACTGTGATACGAAAAAGGAATGGGTTGT
CAAGAAATATCTCCAATCctcaaaaaaaacaatgaaatttctCAACACAA
CAGTAACCGAACATGCAAGGAAGCAGTGCCAAATGCATTCTGTAGCCCGG
AACATAGCACAGAGAATGGCTAAGAAAGCCAAAGAGCTGAAAGATGTCAA
GTTCGGTGACATTTTCGTGTATGAGAGAGTTTACTTTGGGTTGCTTAACG
GAGAGCCCGTCACTTTGGAAGAATTCATTCCtggattttttctgaaatat
gTTAACAACGATGGAAACTGCTTTCCAAACCATACAGAAGAAGCCGCTTT
CATTTACCAAAAGGCACAGACCTTGGTGCACTTTTCTATTCACATTTCAG
ATGGAAAAATCATCCTTACTGATATACAAGGGTCGATTTTTAAGTTATAC
GATCCAGAAATTTCAACCCTCGTTCACCAGGACGAAGATTCCGAGTTTTA
CTTTTGTTCAGGCAACTTATCGTTGATTGCTTTCCAAAGGTTCAGAAAAG
AACACAAATGCAACGAATACTGCCGCATGCTTGGCATGAAAGAAATTGAG
CCGATGGATGAACCTACAGACGAAAATGAATCTTCAGAGAAGAGTTGGGA
AAACCAAGAGAAAGATTTACAATGAACTAAAGAAACTATGAGACATTGAA
CGTTGgtttatttagtatttttttcaacgatatttttcttctgaaagctt
cttttgttaatttttcttttttgtgtcAAACGTCAAACATGATatcggtt
tttttttttcaaacttggtGTCGATTTTAATTTCCCCCTGGGTTTCCCCC
TAATTTTGT Coding sequence (CDS) from alignment at sc0002707:3648..5356 >TCONS_00041108 ID=TCONS_00041108|Name=TCONS_00041108|organism=Clytia hemisphaerica|type=CDS|length=1407bp|location=Sequence derived from alignment at sc0002707:3648..5356 (Clytia hemisphaerica)
ATGTTATCTTGTATGGCTCTCAAAGTACAACGCACTCTCGGTGAAAGAAA
ACGTGAATCAAGAAAAATGGCGAAACGTCGCGGTAACAAGGATGCATTTG
CAGCTTTTGAAATGGAGCAATCCACTAAACGCACCGGGAAGAAAACTGAA
TCTCCAGCGCCGAAAGATTTAACTGTGCAAGTAATGTCTTCTGCAACCAA
TCCCAGAAACAAGAAATACGAAGTACAAGATGTTAAACGGTTCGTCCCAT
TTAATGAATTTTATGAACTTACGCTTGAAAATATCAAAGCTGCGTGTGAA
GCCTACTACCAGATGCCAGCAGGTACTTGTGATGTTCTCGTTACTAACTC
TGGACCATCCGTACAGCGAACTGATCAGATCAAAGGAAAGAAGTCATTTC
TGGTAAGATTTACCGACGAGCAATTTAACAGTCGAAATCTTAATGTAAAT
CGTGTTAGTAGTGGCACTAGAGAATTCCCAGTAGAGGATCAACAAGATGA
TGTCGAAGCAAGTGCACCTATCCCTCCACCCGCTATCCCTCCACCTCCTC
CAAAGTCGCAATTTGCCAAATCTGTCTCCATTGCAACGTTACTCAAGGCT
GGAAAACTGAAAAAGCCGAAGAAGATTGAAAAGATAACTCTGGAATATTA
TTCCCTAGAAATTGACGAATGGGTGAAAATGAAAGATATGAGTCTTGAAA
TAGAGGATAAATCGTTTGGAGAGGGTGCTTTTCGAAAAGCCTTCAAAGCT
GTCGACTGTGATACGAAAAAGGAATGGGTTGTCAAGAAATATCTCCAATC
ctcaaaaaaaacaatgaaatttctCAACACAACAGTAACCGAACATGCAA
GGAAGCAGTGCCAAATGCATTCTGTAGCCCGGAACATAGCACAGAGAATG
GCTAAGAAAGCCAAAGAGCTGAAAGATGTCAAGTTCGGTGACATTTTCGT
GTATGAGAGAGTTTACTTTGGGTTGCTTAACGGAGAGCCCGTCACTTTGG
AAGAATTCATTCCtggattttttctgaaatatgTTAACAACGATGGAAAC
TGCTTTCCAAACCATACAGAAGAAGCCGCTTTCATTTACCAAAAGGCACA
GACCTTGGTGCACTTTTCTATTCACATTTCAGATGGAAAAATCATCCTTA
CTGATATACAAGGGTCGATTTTTAAGTTATACGATCCAGAAATTTCAACC
CTCGTTCACCAGGACGAAGATTCCGAGTTTTACTTTTGTTCAGGCAACTT
ATCGTTGATTGCTTTCCAAAGGTTCAGAAAAGAACACAAATGCAACGAAT
ACTGCCGCATGCTTGGCATGAAAGAAATTGAGCCGATGGATGAACCTACA
GACGAAAATGAATCTTCAGAGAAGAGTTGGGAAAACCAAGAGAAAGATTT
ACAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041108-exon-sc0002707-1491911889:3648..5356 | TCONS_00041108-exon-sc0002707-1491911889:3648..5356 | Clytia hemisphaerica | exon |
| TCONS_00041108-exon-sc0002707-1510915933:3648..5356 | TCONS_00041108-exon-sc0002707-1510915933:3648..5356 | Clytia hemisphaerica | exon |
| TCONS_00041108-exon-sc0002707-1575043694:3648..5356 | TCONS_00041108-exon-sc0002707-1575043694:3648..5356 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002707 | supercontig | sc0002707:3648..5356 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
The following BLAST results are available for this feature:
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