TCONS_00041095 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00041095
Unique Name	TCONS_00041095
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3829

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0002702:10053..15671+
coding sequence from alignment at sc0002702:10053..15671+

transcript sequence

>TCONS_00041095 ID=TCONS_00041095|Name=TCONS_00041095|organism=Clytia hemisphaerica|type=transcript|length=3829bp
gttttaaacacgagcaacaaattcagaataatagaggtatataattattt
ttacaagtcacactttttttatcacattaattgacatcttgacattttag
tcatcttgctagatgttttgttttgagagttcttgcagtatagtttattg
ttcaacttggagagggagtgtttgtaaacataaaattttttttcatagca
gttttttggatttaggaccactcacggtacagATTATCAAACTTTTGGCA
AAATTTCGTTATCTTTGAAGACGTCAGTGTTGAAGACGTCATTGTGTACA
CTGACGTCACcataaaatgccaaaaatagGACCCCCTCTAACTTTTTCCA
CACACATGGATatcttttgctcaaattttatgTAGCCCTCcatatgaaaa
attattttacgaTCTCGTCCCCACAGCATTCCACtgcttcatcaattttt
ctgatGGACGTGATgaaagtagtgataagttgaGTGCCATCAACATCGTA
AAAAAGTGAACGAAGTGACTGGGAACGAATTTGATTGTTTTAGGGACTAA
GCTATTGGCTCGAAACTGACCAATGATAGAAGCGGTCAAAATTTTATCTA
ATCGGACAGaccgggggtactaggtttgcaaggTGAGCTGTAAATCGAAA
ATTacaccctttgagagacaaaattttgacttttttggacccttagagag
accttGGTTCTTACTAAGTTTTGATTGAAATTCCTGGTAATCGTGACCCT
TTCAGGGAACTTTTGGAAGGGGACTTTTGATTTACCCTTTCGAAGACTAA
CCGATGGATTTGTTCCCCTTTGACAGACTTTTGAGGTATGAAAAAGAATA
CTCttcttatggctcgcacatacccagcacccataaATCTACCCATGTGT
TTACCCAAGTCAGTGTGACATCAAAAAATACACTCTCAGGCCCGCTTTTT
AAACAGCGTCCTTTGTGTGTGTGATATCAGGTGGAGACACGCCCTCATCG
TAAGATTCTTGGGTCgtcttattgtttgttccttttgttgagtctgtcgg
tcctattgttcatgctaaatccatacacgatgacgtcaatgtttgttgac
atacctgaaaataaaaacataaagatTATCATTATTTTTGCATGAATATA
TTACGCTACCTTATACGTCATTATAGAATTATACAAAACGAAAGCGAGTC
TAGGCTGCCTGCCTAGAGAGCGCAggccctaatattttttctctcgccct
aatattttttctctcgcggtcttcaggggaaaacaaaagtgatcgatatt
cttcgaaGGAAGAACTTGCCAATAAATAAACccctagacaaaaagatgta
ttttgaggttgggaatggatcccgcgaaaatgaacaaattttaactaggc
gtttttttggcaaaccctcaaactaattttttcttccctcaagctaaaaa
ggttacaGGTTTTGGGCAATCaaggcaaaaatcagcaaaaagctggtgtt
ttccgtaaatctgagatgagttgtatgttatgagttgtatgttgcgagtg
cgttacagttttctaGTCTGTGTTTtgttaacctgtaacctgtaacctgt
aacctgcggtttacacttaCCGCAAAATGCTCCTGCCAAAATCGcagatc
aaaagtttttttcaaaaccacagggatattttctttgaaaaactggacaa
ttttttacaaatgagataaagagagaaaatcttttggagCTAAAACATCT
ATGATAATAAAATGCAAAAGGGCCTCAAATGAGGAACATGAACACAGGAA
ACTTCAAACACTTGTTTCAAGTTATTGAACACAACAGTTCAAGTCATTCC
CTCACAATGTGAAATTGATATGCTTGAAAACCAAAAACGGTAAGGAAAAA
CAAAACCATTGGTGAAAATATGTATATAATTAAGAGAGAGATGACTttta
aatttgaagataaaaaggATTATAAGGAAATGTTTAGTATTATATACAGA
CTTTTCTACATAATGTATCATTGGGTTCAATGTTTTTTCATACTGGCAGG
CTCCTGTGTTCCCAGATTGTCATTAAATTGCCAACCATAAGGCTGAGTGT
GGGACATTTGGTGAACatagcttcttttttttaaatgcgaaaaaaaaatt
ggcaggaAGCTAAGCtaacaaatcaaaattgaaatttgaaatttgttttt
ccccCATTAATTTTTCAGACCACTCCCAATCATGAGGGAGGATCAAAATC
TTGTGATTCATGCTCAAAAAGAAGCTGTACCATAATAATCATTGTACTTG
CTGTTCTATGTTGTTGTCTCATATCCGTAGCCATCTATCTTGGAGtcaac
aaatcgaccaaaacaTCATCGAAACCTATTACCTTGAATAATGGGTTACA
ATTCTTTCAAGTATCGGATACCCATCTTGATATTTATTACAATGATAAAG
TTGATGGTTTGAATGGGCAGTTATGTAGAACAATGAATCAAACAGACGGA
TATAAAGTCAATTTTACAGAAGGATCAGCTCCTTATTGGAGAGTGCATTG
TGATTCACCGTACAAGTTGGTTCAATCATCAGCAGATTACATTAAAACAC
TAAATGAAGCGTCTAATGTGAAAGCGCAATTCATTTTATTGTCAGGAAAC
AATGATATCCCCCTTCATTATAATCCACCAGTTGAACACCCTGAGTCGTT
TTATGGAGACCTATCAAAGGAAGTAACCAAGTACATCTTTCCAAAGAGCT
CTGTGTTGGCTGAATTGAACAGTGTCAAAGAATTCAATGAATCCTTTCTA
CAAGGGGGTTATTATGCTGTCAATGTTTCAGAATTTCTGCAACTCATCAC
GTTGAGTACAAACTATTGGAACTCAAGATGCTTTACAATCAATCCAAGTA
TTACCACCATTGGTGATCGCCAAATGAAATGGCTGGAAAACACTTTCAAA
ACTGCTGCAGCATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCCAGC
AGGTATTTCAACTTACAAAGATGAAGGgagtttttggttgaaaaactaCA
CAACAGTTTACGTCAAACTCATGACTGATTTTGCAGACATTATAACAGGG
CAGTTTTATGGACATGCACATAAAGACaagatcaaaattcaaaacgttCA
CGATTCTTTCTATCCAAATACACAACCTTCAATACCAAAGGCTTTTCTTT
TGATGTCTCCAAGCATTACACCCATCCAAGGAAATAATGCAGCCTTTCGT
TTGTTTACTTTGAGTAAAGATCTTGAGCTGTCTGATTATACACAATATTA
TATGGATTTTATACTTGCTAATGtattttcaaaGCCTTCATGGAAAAAAG
AATACACGTTCTCTGAATGTTATGGGGCTAGCATCTCAGCAAAATCCATC
CAAGATATTGTACAGAATGTTATCTCCTCATCTGACAACTCAACCTGGGT
ACGTTACATGACCCATATGAGAACGTTGTATGGTGGTTTTTCAACTGAAG
TTATGTTCAGAGAGTATTGTGGTGCACAACATTTTACTTTGGAAGCTTAC
TTAGCTTGTGTGAAATATTATGAGACCAATGGATTTTGAATCCATCGGTT
TTTGTGAGTAACTAACAGAAAACAATGTCATGTTTTTGTTGTCCTATTta
gatttttaataattttcatttttcacataTACAATATTTTTGGAACctat
tttttaacctttttactCAGTTCCTCTTAACTACTGTTTTTTTATACCCA
CATACATATTATTTTAATGATATGAATTTTCAATTACATTTTGAATTCAT
ATAATTGTGTAGACATCAATGGACATTGC

Run BLAST on NCBI

protein sequence of TCONS_00041095-protein

>TCONS_00041095-protein ID=TCONS_00041095-protein|Name=TCONS_00041095-protein|organism=Clytia hemisphaerica|type=polypeptide|length=368bp
MNQTDGYKVNFTEGSAPYWRVHCDSPYKLVQSSADYIKTLNEASNVKAQF
ILLSGNNDIPLHYNPPVEHPESFYGDLSKEVTKYIFPKSSVLAELNSVKE
FNESFLQGGYYAVNVSEFLQLITLSTNYWNSRCFTINPSITTIGDRQMKW
LENTFKTAAASNKKVLVSGHIPAGISTYKDEGSFWLKNYTTVYVKLMTDF
ADIITGQFYGHAHKDKIKIQNVHDSFYPNTQPSIPKAFLLMSPSITPIQG
NNAAFRLFTLSKDLELSDYTQYYMDFILANVFSKPSWKKEYTFSECYGAS
ISAKSIQDIVQNVISSSDNSTWVRYMTHMRTLYGGFSTEVMFREYCGAQH
FTLEAYLACVKYYETNGF

Run BLAST on NCBI

transcript from alignment at sc0002702:10053..15671+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00041095 ID=TCONS_00041095|Name=TCONS_00041095|organism=Clytia hemisphaerica|type=transcript|length=5619bp|location=Sequence derived from alignment at sc0002702:10053..15671+ (Clytia hemisphaerica)
gttttaaacacgagcaacaaattcagaataatagaggtatataattattt
ttacaagtcacactttttttatcacattaattgacatcttgacattttag
tcatcttgctagatgttttgttttgagagttcttgcagtatagtttattg
ttcaacttggagagggagtgtttgtaaacataaaattttttttcatagca
gttttttggatttaggaccactcacggtacagATTATCAAACTTTTGGCA
AAATTTCGTTATCTTTGAAGACGTCAGTGTTGAAGACGTCATTGTGTACA
CTGACGTCACcataaaatgccaaaaatagGACCCCCTCTAACTTTTTCCA
CACACATGGATatcttttgctcaaattttatgTAGCCCTCcatatgaaaa
attattttacgaTCTCGTCCCCACAGCATTCCACtgcttcatcaattttt
ctgatGGACGTGATgaaagtagtgataagttgaGTGCCATCAACATCGTA
AAAAAGTGAACGAAGTGACTGGGAACGAATTTGATTGTTTTAGGGACTAA
GCTATTGGCTCGAAACTGACCAATGATAGAAGCGGTCAAAATTTTATCTA
ATCGGACAGaccgggggtactaggtttgcaaggTGAGCTGTAAATCGAAA
ATTacaccctttgagagacaaaattttgacttttttggacccttagagag
accttGGTTCTTACTAAGTTTTGATTGAAATTCCTGGTAATCGTGACCCT
TTCAGGGAACTTTTGGAAGGGGACTTTTGATTTACCCTTTCGAAGACTAA
CCGATGGATTTGTTCCCCTTTGACAGACTTTTGAGGTATGAAAAAGAATA
CTCttcttatggctcgcacatacccagcacccataaATCTACCCATGTGT
TTACCCAAGTCAGTGTGACATCAAAAAATACACTCTCAGGCCCGCTTTTT
AAACAGCGTCCTTTGTGTGTGTGATATCAGGTGGAGACACGCCCTCATCG
TAAGATTCTTGGGTCgtcttattgtttgttccttttgttgagtctgtcgg
tcctattgttcatgctaaatccatacacgatgacgtcaatgtttgttgac
atacctgaaaataaaaacataaagatTATCATTATTTTTGCATGAATATA
TTACGCTACCTTATACGTCATTATAGAATTATACAAAACGAAAGCGAGTC
TAGGCTGCCTGCCTAGAGAGCGCAggccctaatattttttctctcgccct
aatattttttctctcgcggtcttcaggggaaaacaaaagtgatcgatatt
cttcgaaGGAAGAACTTGCCAATAAATAAACccctagacaaaaagatgta
ttttgaggttgggaatggatcccgcgaaaatgaacaaattttaactaggc
gtttttttggcaaaccctcaaactaattttttcttccctcaagctaaaaa
ggttacaGGTTTTGGGCAATCaaggcaaaaatcagcaaaaagctggtgtt
ttccgtaaatctgagatgagttgtatgttatgagttgtatgttgcgagtg
cgttacagttttctaGTCTGTGTTTtgttaacctgtaacctgtaacctgt
aacctgcggtttacacttaCCGCAAAATGCTCCTGCCAAAATCGcagatc
aaaagtttttttcaaaaccacagggatattttctttgaaaaactggacaa
ttttttacaaatgagataaagagagaaaatcttttggagCTAAAACATCT
ATGATAATAAAATGCAAAAGGGCCTCAAATGAGGAACATGAACACAGGAA
ACTTCAAACACTTGTTTCAAGTTATTGAACACAACAGTTCAAGTCATTCC
CTCACAATGTGAAATTGATATGCTTGAAAACCAAAAACGGTAAGGAAAAA
CAAAACCATTGGTGAAAATATGTATATAATTAAGAGAGAGATGACTttta
aatttgaagataaaaaggATTATAAGGAAATGTTTAGTATTATATACAGA
CTTTTCTACATAATGTATCATTGGGTTCAATGTTTTTTCATACTGGCAGG
CTCCTGTGTTCCCAGATTGTCATTAAATTGCCAACCATAAGGCTGAGTGT
GGGACATTTGGTGAACatagcttcttttttttaaatgcgaaaaaaaaatt
ggcaggaAGCTAAGCtaacaaatcaaaattgaaatttgaaatttgttttt
ccccCATTAATTTTTCAGACCACTCCCAATCATGAGGGAGGATCAAAATC
TTGTGATTCATGCTCAAAAAGAAGCTGTACCATAATAATCATTGTACTTG
CTGTTCTATGTTGTTGTCTCATATCCGTAGCCATCTATCTTGGAGtcaac
aaatcgaccaaaacaTCATCGAAACCTATTACCTTGAATAATGGGTTACA
ATTCTTTCAAGTATCGGATACCCATCTTGATATTTATTACAATGATAAAG
TTGATGGTTTGAATGGGCAGTTATGTAGAACAATGAATCAAACAGACGGA
TATAAAGTCAATTTTACAGAAGGATCAGCTCCTTATTGGAGAGTGCATTG
TGATTCACCGTACAAGTTGGTTCAATCATCAGCAGATTACATTAAAACAC
TAAATGAAGCGTCTAATGTGAAAGCGCAATTCATTTTATTGTCAGGTAAC
TGCTTTGATAATGTGGTTCATTTCTGAATTTAAGAAGGAATTGCAAAATT
TCAGTATGTAAAAAAtctataaataaattttgtaaagcTCACTTTTACTG
GAAATGGCAAATcagctcagcattgttctttaAGTTATTCTTAGTTTCTG
AGCcctgtttttctaataaaattgtTATTTAAGCAATAGAGTAAAAGAGT
ATCACAAACcatcacttttttttaaatttaaaatgcaAGGTGTGTTACTG
TGTACAGTATATGGGGggtaacattttctttgttttcattgttgttttta
tttaaaggtGACCAAGCAGCTCATGCTTACTCTAAATTTACTGAAGTGGA
TGCATACAAAAGTTTAGTGTGGTCATGTTCTCTTTTTGGTCAATAAGCTT
TTGTCAATTTCTACATAGCAAGTTTTTCTTAAAGTATGTAAAATTCATAA
TGTTTGAATCTTCCTAATTCAAGTTATATCATTTTAATTTTCATATTTTA
TTGTACTTTTTTGCAGGAAACAATGATATCCCCCTTCATTATAATCCACC
AGTTGAACACCCTGAGTCGTTTTATGGAGACCTATCAAAGGAAGTAACCA
AGTACATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGAACAGTGTCAAA
GAATTCAATGAATCCTTTCTACAAGGGGGTTATTATGCTGTCAATGTTTC
AGGTAAGAAATTTTGGAACAATTTTTCACAAAATTATAGTAAACAAAAAT
TGATAAAAACAACCAGATTTTTTCCTAGGTTATTCAGTAGATGTCTGATT
TGTCAGGTATGGAAAGGTTGTATAATCAACCAGTGTAACTAAGCTAACAA
ATTTTGCAAATGTTAGAAAGTTTGTAAACAATAAATCAAAATAAACCTAA
TGCACAGATCTGGGACTTTTATAAGAGTGTGGGAAATCAATATCTTGGAG
GGCCTAAAACTGTCAGGCCTTAAACTTCACTGGCAGCTAAATTTTCGTTG
GAGAGCTTTAGGCCATAACACTCCTGAAATTATAGCAGTTATAGTAATGA
AAACCACTGTAAGAAATTTTGATTATGTTATTATTCCAGAAGCTATATAG
CAACTTTTCAATATATTCCTTATAGAATTTCTGCAACTCATCACGTTGAG
TACAAACTATTGGAACTCAAGATGCTTTACAATCAATCCAAGTATTACCA
CCATTGGTGATCGCCAAATGAAATGGCTGGAAAACACTTTCAAAACTGCT
GCAGCATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCCAGCAGGGTA
ACAATTCCTTTTGGACTTTCTTTAGATTGTTATAAAGTTGTAAAAATATT
CATTGACAACGGTAAAATTCCCCCATTGACATACAATGTATTTGGATTGG
GGAGAAAATACTTAGCCATTCGTCtcagaaaatcatgaaaaacatttgtG
CAATTAGGAAAATACTTATAtctaaattttctcaaaatcactaaaaaaca
gACTTTGGCCCGTTATGATGAAATTCTTTCAATTTCTATAGTATNaaatc
atgaaaaacatttgtGCAATTAGGAAAATACTTATAtctaaattttctca
aaatcactaaaaaacagACTTTGGCCCGTTATGATGAAATTCTTTCAATT
TCTATAGTATTTCAACTTACAAAGATGAAGGgagtttttggttgaaaaac
taCACAACAGTTTACGTCAAACTCATGACTGATTTTGCAGACATTATAAC
AGGTAAGAATGCTACTTAAATCAATGAAAACAAGAGCTTTTGCAAATCAa
ttgaaattgattttaaacgTTCAAGAGAAATAAAGAGCGGTGGTTAGAAG
ATTGATACTTTTCCAAATAAGNATTTTTAAAGGTTCAAGAGAAATAAAGA
GCGGTGGATAGGGAAATTGATTcttttccaaataaaataaaagctttGTT
TCTATTTCAGGGCAGTTTTATGGACATGCACATAAAGACaagatcaaaat
tcaaaacgttCACGATTCTTTCTATCCAAATACACAACCTTCAATACCAA
AGGCTTTTCTTTTGATGTCTCCAAGCATTACACCCATCCAAGGAAATAAT
GCAGCCTTTCGTTTGTTTACTTTGAGTAAAGATCTTGAGCTGTCTGATTA
TACACAATATTATATGGATTTTATACTTGCTAATGGtaagaaaaaatctt
tgcaATTTAAgtttaacatttttgaaaatggctTCCTTTTTTAATACAAG
TTTTGAGAAAAGAAtgtcttaaaattttcttctatCTCTTTCTTTACGAT
GACACCATCGTCCATTAgcactttgtattttaaaactttacatATTAGTT
TGGACACTGGTTTTGTTATTGTAATANTTtgtattttaaaactttacatA
TTAGTTTGGACACTGGTTTTGTTATTGCAATGAATGGTAACTATCTTTCA
TATCCtttttcagtattttcaaaGCCTTCATGGAAAAAAGAATACACGTT
CTCTGAATGTTATGGGGCTAGCATCTCAGCAAAATCCATCCAAGATATTG
TACAGAATGTTATCTCCTCATCTGACAACTCAACCTGGGTACGTTACATG
ACCCATATGAGAACGTTGTATGGTGGTTTTTCAACTGAAGTTATGTTCAG
AGAGTATTGTGGTGCACAACATTTTACTTTGGAAGCTTACTTAGCTTGTG
TGAAATATTATGAGACCAATGGATTTTGAATCCATCGGTTTTTGTGAGTA
ACTAACAGAAAACAATGTCATGTTTTTGTTGTCCTATTtagatttttaat
aattttcatttttcacataTACAATATTTTTGGAACctattttttaacct
ttttactCAGTTCCTCTTAACTACTGTTTTTTTATACCCACATACATATT
ATTTTAATGATATGAATTTTCAATTACATTTTGAATTCATATAATTGTGT
AGACATCAATGGACATTGC

Coding sequence (CDS) from alignment at sc0002702:10053..15671+

>TCONS_00041095 ID=TCONS_00041095|Name=TCONS_00041095|organism=Clytia hemisphaerica|type=CDS|length=6642bp|location=Sequence derived from alignment at sc0002702:10053..15671+ (Clytia hemisphaerica)
ATGAATCAAACAGACGGATATAAAGTCAATTTTACAGAAGGATCAGCTCC
TTATTGGAGAGTGCATTGTGATTCACCGTACAAGTTGGTTCAATCATCAG
CAGATTACATTAAAACACTAAATGAAGCGTCTAATGTGAAAGCGCAATTC
ATTTTATTGTCAGGAAACAATGATATCCCCCTTCATTATAATCCACCAGT
TGAACACCCTGAGTCGTTTTATGGAGACCTATCAAAGGAAGTAACCAAGT
ACATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGAACAGTGTCAAAGAA
TTCAATGAATCCTTTCTACAAGGGGGTTATTATGCTGTCAATGTTTCAGA
ATTTCTGCAACTCATCACGTTGAGTACAAACTATTGGAACTCAAGATGCT
TTACAATCAATCCAAGTATTACCACCATTGGTGATCGCCAAATGAAATGG
CTGGAAAACACTTTCAAAACTGCTGCAGCATCGAACAAAAAAGTTTTGGT
CTCAGGACACATCCCAGCAGGTATTTCAACTTACAAAGATGAAGGgagtt
tttggttgaaaaactaCACAACAGTTTACGTCAAACTCATGACTGATTTT
GCAGACATTATAACAGGGCAGTTTTATGGACATGCACATAAAGACaagat
caaaattcaaaacgttCACGATTCTTTCTATCCAAATACACAACCTTCAA
TACCAAAGGCTTTTCTTTTGATGTCTCCAAGCATTACACCCATCCAAGGA
AATAATGCAGCCTTTCGTTTGTTTACTTTGAGTAAAGATCTTGAGCTGTC
TGATTATACACAATATTATATGGATTTTATACTTGCTAATGtattttcaa
aGCCTTCATGGAAAAAAGAATACACGTTCTCTGAATGTTATGGGGCTAGC
ATCTCAGCAAAATCCATCCAAGATATTGTACAGAATGTTATCTCCTCATC
TGACAACTCAACCTGGGTACGTTACATGACCCATATGAGAACGTTGTATG
GTGGTTTTTCAACTGAAGTTATGTTCAGAGAGTATTGTGGTGCACAACAT
TTTACTTTGGAAGCTTACTTAGCTTGTGTGAAATATTATGAGACCAATGG
ATTTTGAATGAATCAAACAGACGGATATAAAGTCAATTTTACAGAAGGAT
CAGCTCCTTATTGGAGAGTGCATTGTGATTCACCGTACAAGTTGGTTCAA
TCATCAGCAGATTACATTAAAACACTAAATGAAGCGTCTAATGTGAAAGC
GCAATTCATTTTATTGTCAGGAAACAATGATATCCCCCTTCATTATAATC
CACCAGTTGAACACCCTGAGTCGTTTTATGGAGACCTATCAAAGGAAGTA
ACCAAGTACATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGAACAGTGT
CAAAGAATTCAATGAATCCTTTCTACAAGGGGGTTATTATGCTGTCAATG
TTTCAGAATTTCTGCAACTCATCACGTTGAGTACAAACTATTGGAACTCA
AGATGCTTTACAATCAATCCAAGTATTACCACCATTGGTGATCGCCAAAT
GAAATGGCTGGAAAACACTTTCAAAACTGCTGCAGCATCGAACAAAAAAG
TTTTGGTCTCAGGACACATCCCAGCAGGTATTTCAACTTACAAAGATGAA
GGgagtttttggttgaaaaactaCACAACAGTTTACGTCAAACTCATGAC
TGATTTTGCAGACATTATAACAGGGCAGTTTTATGGACATGCACATAAAG
ACaagatcaaaattcaaaacgttCACGATTCTTTCTATCCAAATACACAA
CCTTCAATACCAAAGGCTTTTCTTTTGATGTCTCCAAGCATTACACCCAT
CCAAGGAAATAATGCAGCCTTTCGTTTGTTTACTTTGAGTAAAGATCTTG
AGCTGTCTGATTATACACAATATTATATGGATTTTATACTTGCTAATGta
ttttcaaaGCCTTCATGGAAAAAAGAATACACGTTCTCTGAATGTTATGG
GGCTAGCATCTCAGCAAAATCCATCCAAGATATTGTACAGAATGTTATCT
CCTCATCTGACAACTCAACCTGGGTACGTTACATGACCCATATGAGAACG
TTGTATGGTGGTTTTTCAACTGAAGTTATGTTCAGAGAGTATTGTGGTGC
ACAACATTTTACTTTGGAAGCTTACTTAGCTTGTGTGAAATATTATGAGA
CCAATGGATTTTGAATGAATCAAACAGACGGATATAAAGTCAATTTTACA
GAAGGATCAGCTCCTTATTGGAGAGTGCATTGTGATTCACCGTACAAGTT
GGTTCAATCATCAGCAGATTACATTAAAACACTAAATGAAGCGTCTAATG
TGAAAGCGCAATTCATTTTATTGTCAGGAAACAATGATATCCCCCTTCAT
TATAATCCACCAGTTGAACACCCTGAGTCGTTTTATGGAGACCTATCAAA
GGAAGTAACCAAGTACATCTTTCCAAAGAGCTCTGTGTTGGCTGAATTGA
ACAGTGTCAAAGAATTCAATGAATCCTTTCTACAAGGGGGTTATTATGCT
GTCAATGTTTCAGAATTTCTGCAACTCATCACGTTGAGTACAAACTATTG
GAACTCAAGATGCTTTACAATCAATCCAAGTATTACCACCATTGGTGATC
GCCAAATGAAATGGCTGGAAAACACTTTCAAAACTGCTGCAGCATCGAAC
AAAAAAGTTTTGGTCTCAGGACACATCCCAGCAGGTATTTCAACTTACAA
AGATGAAGGgagtttttggttgaaaaactaCACAACAGTTTACGTCAAAC
TCATGACTGATTTTGCAGACATTATAACAGGGCAGTTTTATGGACATGCA
CATAAAGACaagatcaaaattcaaaacgttCACGATTCTTTCTATCCAAA
TACACAACCTTCAATACCAAAGGCTTTTCTTTTGATGTCTCCAAGCATTA
CACCCATCCAAGGAAATAATGCAGCCTTTCGTTTGTTTACTTTGAGTAAA
GATCTTGAGCTGTCTGATTATACACAATATTATATGGATTTTATACTTGC
TAATGtattttcaaaGCCTTCATGGAAAAAAGAATACACGTTCTCTGAAT
GTTATGGGGCTAGCATCTCAGCAAAATCCATCCAAGATATTGTACAGAAT
GTTATCTCCTCATCTGACAACTCAACCTGGGTACGTTACATGACCCATAT
GAGAACGTTGTATGGTGGTTTTTCAACTGAAGTTATGTTCAGAGAGTATT
GTGGTGCACAACATTTTACTTTGGAAGCTTACTTAGCTTGTGTGAAATAT
TATGAGACCAATGGATTTTGAATGAATCAAACAGACGGATATAAAGTCAA
TTTTACAGAAGGATCAGCTCCTTATTGGAGAGTGCATTGTGATTCACCGT
ACAAGTTGGTTCAATCATCAGCAGATTACATTAAAACACTAAATGAAGCG
TCTAATGTGAAAGCGCAATTCATTTTATTGTCAGGAAACAATGATATCCC
CCTTCATTATAATCCACCAGTTGAACACCCTGAGTCGTTTTATGGAGACC
TATCAAAGGAAGTAACCAAGTACATCTTTCCAAAGAGCTCTGTGTTGGCT
GAATTGAACAGTGTCAAAGAATTCAATGAATCCTTTCTACAAGGGGGTTA
TTATGCTGTCAATGTTTCAGAATTTCTGCAACTCATCACGTTGAGTACAA
ACTATTGGAACTCAAGATGCTTTACAATCAATCCAAGTATTACCACCATT
GGTGATCGCCAAATGAAATGGCTGGAAAACACTTTCAAAACTGCTGCAGC
ATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCCAGCAGGTATTTCAA
CTTACAAAGATGAAGGgagtttttggttgaaaaactaCACAACAGTTTAC
GTCAAACTCATGACTGATTTTGCAGACATTATAACAGGGCAGTTTTATGG
ACATGCACATAAAGACaagatcaaaattcaaaacgttCACGATTCTTTCT
ATCCAAATACACAACCTTCAATACCAAAGGCTTTTCTTTTGATGTCTCCA
AGCATTACACCCATCCAAGGAAATAATGCAGCCTTTCGTTTGTTTACTTT
GAGTAAAGATCTTGAGCTGTCTGATTATACACAATATTATATGGATTTTA
TACTTGCTAATGtattttcaaaGCCTTCATGGAAAAAAGAATACACGTTC
TCTGAATGTTATGGGGCTAGCATCTCAGCAAAATCCATCCAAGATATTGT
ACAGAATGTTATCTCCTCATCTGACAACTCAACCTGGGTACGTTACATGA
CCCATATGAGAACGTTGTATGGTGGTTTTTCAACTGAAGTTATGTTCAGA
GAGTATTGTGGTGCACAACATTTTACTTTGGAAGCTTACTTAGCTTGTGT
GAAATATTATGAGACCAATGGATTTTGAATGAATCAAACAGACGGATATA
AAGTCAATTTTACAGAAGGATCAGCTCCTTATTGGAGAGTGCATTGTGAT
TCACCGTACAAGTTGGTTCAATCATCAGCAGATTACATTAAAACACTAAA
TGAAGCGTCTAATGTGAAAGCGCAATTCATTTTATTGTCAGGAAACAATG
ATATCCCCCTTCATTATAATCCACCAGTTGAACACCCTGAGTCGTTTTAT
GGAGACCTATCAAAGGAAGTAACCAAGTACATCTTTCCAAAGAGCTCTGT
GTTGGCTGAATTGAACAGTGTCAAAGAATTCAATGAATCCTTTCTACAAG
GGGGTTATTATGCTGTCAATGTTTCAGAATTTCTGCAACTCATCACGTTG
AGTACAAACTATTGGAACTCAAGATGCTTTACAATCAATCCAAGTATTAC
CACCATTGGTGATCGCCAAATGAAATGGCTGGAAAACACTTTCAAAACTG
CTGCAGCATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCCAGCAGGT
ATTTCAACTTACAAAGATGAAGGgagtttttggttgaaaaactaCACAAC
AGTTTACGTCAAACTCATGACTGATTTTGCAGACATTATAACAGGGCAGT
TTTATGGACATGCACATAAAGACaagatcaaaattcaaaacgttCACGAT
TCTTTCTATCCAAATACACAACCTTCAATACCAAAGGCTTTTCTTTTGAT
GTCTCCAAGCATTACACCCATCCAAGGAAATAATGCAGCCTTTCGTTTGT
TTACTTTGAGTAAAGATCTTGAGCTGTCTGATTATACACAATATTATATG
GATTTTATACTTGCTAATGtattttcaaaGCCTTCATGGAAAAAAGAATA
CACGTTCTCTGAATGTTATGGGGCTAGCATCTCAGCAAAATCCATCCAAG
ATATTGTACAGAATGTTATCTCCTCATCTGACAACTCAACCTGGGTACGT
TACATGACCCATATGAGAACGTTGTATGGTGGTTTTTCAACTGAAGTTAT
GTTCAGAGAGTATTGTGGTGCACAACATTTTACTTTGGAAGCTTACTTAG
CTTGTGTGAAATATTATGAGACCAATGGATTTTGAATGAATCAAACAGAC
GGATATAAAGTCAATTTTACAGAAGGATCAGCTCCTTATTGGAGAGTGCA
TTGTGATTCACCGTACAAGTTGGTTCAATCATCAGCAGATTACATTAAAA
CACTAAATGAAGCGTCTAATGTGAAAGCGCAATTCATTTTATTGTCAGGA
AACAATGATATCCCCCTTCATTATAATCCACCAGTTGAACACCCTGAGTC
GTTTTATGGAGACCTATCAAAGGAAGTAACCAAGTACATCTTTCCAAAGA
GCTCTGTGTTGGCTGAATTGAACAGTGTCAAAGAATTCAATGAATCCTTT
CTACAAGGGGGTTATTATGCTGTCAATGTTTCAGAATTTCTGCAACTCAT
CACGTTGAGTACAAACTATTGGAACTCAAGATGCTTTACAATCAATCCAA
GTATTACCACCATTGGTGATCGCCAAATGAAATGGCTGGAAAACACTTTC
AAAACTGCTGCAGCATCGAACAAAAAAGTTTTGGTCTCAGGACACATCCC
AGCAGGTATTTCAACTTACAAAGATGAAGGgagtttttggttgaaaaact
aCACAACAGTTTACGTCAAACTCATGACTGATTTTGCAGACATTATAACA
GGGCAGTTTTATGGACATGCACATAAAGACaagatcaaaattcaaaacgt
tCACGATTCTTTCTATCCAAATACACAACCTTCAATACCAAAGGCTTTTC
TTTTGATGTCTCCAAGCATTACACCCATCCAAGGAAATAATGCAGCCTTT
CGTTTGTTTACTTTGAGTAAAGATCTTGAGCTGTCTGATTATACACAATA
TTATATGGATTTTATACTTGCTAATGtattttcaaaGCCTTCATGGAAAA
AAGAATACACGTTCTCTGAATGTTATGGGGCTAGCATCTCAGCAAAATCC
ATCCAAGATATTGTACAGAATGTTATCTCCTCATCTGACAACTCAACCTG
GGTACGTTACATGACCCATATGAGAACGTTGTATGGTGGTTTTTCAACTG
AAGTTATGTTCAGAGAGTATTGTGGTGCACAACATTTTACTTTGGAAGCT
TACTTAGCTTGTGTGAAATATTATGAGACCAATGGATTTTGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_025107	XLOC_025107	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00041095-protein	TCONS_00041095-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0002702	supercontig	sc0002702:10053..15671 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.47768	1.22613	1.41485	0.821285	5.02665	4.79302	5.92083	9.21773	4.28947	3.95732	4.88501	4.52063	5.07259	5.55673	1.07834	0.977082	0.725108	0.767948	0.417586	0.558211	0.585242	0.859924	1.20236	0.833249	2.62922	7.22481	0.848701	0.456866	0.932194	1.065

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR029052	Metallo-depent_PP-like

Blast

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BLAST of TCONS_00041095 vs. Swiss-Prot (Human)
Match: ASM3A (Acid sphingomyelinase-like phosphodiesterase 3a OS=Homo sapiens GN=SMPDL3A PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.727e-27
Identity = 97/365 (26.58%), Postives = 164/365 (44.93%), Query Frame = 2

Query: 2399 QFFQVSDTHLDIYYNDKVDGLNGQLCRTMNQTDGYKVNFTEGSAPYWRVHCDSPYKLVQSSADYIKTLNEASNVKAQFILLSGNNDIPLHYNPPVEHPESFYGDLSKEVT--KYIFPKSSVLAEL-------------------NSVKEFNESFL---------QGGYYA--VNVSEFLQLITLSTN-YWNSRCFTINPSITTIGDRQMKWLENTFKTAAASNKKVLVSGHIPAGISTYKDEGSFWLKNYTTVYVKLMTDFADIITGQFYGHAHKDKIKIQNVHDSFYPNTQPSIPKAFLLMSPSITPI------QGNNAAFRLFTLS-KDLELSDYTQYYMDFILANVFSKPSWKKEYTFSECY 3373
            QF+ V+D HLD  Y+   D  + ++C +    +           P+  V CDSPY+L+ S+ D+IK     S  +A F++ +G  D P H   P    ++    ++   T  + +FP   V   L                   N+V    + +L         +GG+Y+  V  +  L++I+L+TN Y+     T+N    T    Q +WLE+T   +  + +KV +  H+P G        +   + Y    + +   ++D+I GQFYGH H+D I +         + +   P   L ++P++TP+      Q NN   RLF    +D +L D  QYY++   AN+  +  WK EY  ++ Y
Sbjct:   39 QFWHVTDLHLDPTYHITDD--HTKVCASSKGANA------SNPGPFGDVLCDSPYQLILSAFDFIKN----SGQEASFMIWTG--DSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPVVTSKVYNAVANLWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPNIMTLN---KTDPANQFEWLESTLNNSQQNKEKVYIIAHVPVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVL--------SDKKGSPVNSLFVAPAVTPVKSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTY 378

The following BLAST results are available for this feature:

BLAST of TCONS_00041095 vs. Swiss-Prot (Human)

BLAST of TCONS_00041095 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ASM3A	2.727e-27	26.58	Acid sphingomyelinase-like phosphodiesterase 3a OS...	[more]

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TCONS_00041095 (transcript) - C. hemisphaerica