TCONS_00041078 (transcript) - C. hemisphaerica

Overview
NameTCONS_00041078
Unique NameTCONS_00041078
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length296

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00041078 ID=TCONS_00041078|Name=TCONS_00041078|organism=Clytia hemisphaerica|type=transcript|length=296bp
TCATTTCATTCACATCATTTTGTTATGTTTGCCTACTGAAGAACTAGGAA
CACTAAATATTAGAAACATctgtaataaaataataaaacagtATTTTATA
GGTATACAGATAATAAAATCGAAAATAAATTACAATCTAAAACTTTTGTT
TAATTTACATTTTcgtttttcgatgacgtcagctATTAGTGCGCATGCGT
TTGAGGTAATCGGTCAGTTTGGTATCTGGTGGCAACCAATCGTTTTGGGG
CATGTCGATTTCGATAATGGCTGAGTTGTCTTTCAGTCGTATGGCT
Run BLAST on NCBI

transcript from alignment at sc0002693:12911..13206

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00041078 ID=TCONS_00041078|Name=TCONS_00041078|organism=Clytia hemisphaerica|type=transcript|length=296bp|location=Sequence derived from alignment at sc0002693:12911..13206 (Clytia hemisphaerica)
AGCCATACGACTGAAAGACAACTCAGCCATTATCGAAATCGACATGCCCC
AAAACGATTGGTTGCCACCAGATACCAAACTGACCGATTACCTCAAACGC
ATGCGCACTAATagctgacgtcatcgaaaaacgAAAATGTAAATTAAACA
AAAGTTTTAGATTGTAATTTATTTTCGATTTTATTATCTGTATACCTATA
AAATactgttttattattttattacagATGTTTCTAATATTTAGTGTTCC
TAGTTCTTCAGTAGGCAAACATAACAAAATGATGTGAATGAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_025095XLOC_025095Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00041078-exon-sc0002693-1491911889:12911..13206TCONS_00041078-exon-sc0002693-1491911889:12911..13206Clytia hemisphaericaexon
TCONS_00041078-exon-sc0002693-1510915933:12911..13206TCONS_00041078-exon-sc0002693-1510915933:12911..13206Clytia hemisphaericaexon
TCONS_00041078-exon-sc0002693-1575043694:12911..13206TCONS_00041078-exon-sc0002693-1575043694:12911..13206Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002693supercontigsc0002693:12911..13206 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.5663	20.237	6.45018	1.35225	13.7186	9.97337	29.2964	25.4679	33.261	33.1292	31.3315	23.0351	29.2275	31.1961	29.1133	29.7553	37.878	32.5618	38.065	28.9689	23.999	20.1494	42.9233	48.3552	14.4172	12.867	34.0354	23.8187	37.0346	42.794
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00041078 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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