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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00041070 ID=TCONS_00041070|Name=TCONS_00041070|organism=Clytia hemisphaerica|type=transcript|length=947bp
aacaaaatacacGGTTTTTTAAGCGAGTGCCGTCTATTATATTCTCCGAA
CTCtgaattttaaatctatttcgtgactaacggacaattGCCATGTTTAC
TAACAGAAAACAACTTTTAGTGGAAAAatacttcatttttggtaaGTTTA
GCCTCAATTTGTTTGCAATAAGGTGTTAGAAAccaaccattttgaaaaag
tgatcttatgaaaatttcatctcaGGTAGGATGActttcgtgactaacgg
acaattGCCATGTTTACTAACAGAAAACAACTTTTAGTGGAAAAatactt
catttttggtaaGTTTAGCCTCAATTTGTTTGCAATAAGGTGTTAGAAAc
caaccattttgaaaaagtgatcttatgaaaatttcatctcaGGTAGGATG
ActttcgtgactaacggacacttCTTGATGAGCCTCTTGAGAGCTACCCA
CTCAACCTTtagggctaaaattttgcacttaTTTTATGGTCATAGTACTT
CtgtttttaagacaaaaataaaagaaacatgcagCTTCCCTTggctttca
ttggaacttttcttCTTATCAGTGTGACTAACGGACAGTCGGGTAGGCAT
GCATAACAGCCAGAAAGAAAACAAATAGGAGTTAAGCAAAGCAGATTTTG
ATTATTGATATGTTTTCTATAATGGTTGTCAGTACTCTATCACAGATTTG
TGTACTGATACAATCatatttggatgaaaaaagtttctggaaaagttctt
ggttttttcaagcaattttgtattttttttgtattaaaggCTTCACCCCA
GCACAGAAGCGTGAAAAATGGactttaaagaaagattttctggaGTCTCA
CACTTCAACATATGTATattcaagagaaaatgaaaacttatgttatttct
gaatttgaaattttgacctagATGTTAATTTTCTCATGGAATTCATG Run BLAST on NCBI transcript from alignment at sc0002689:10385..11331- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00041070 ID=TCONS_00041070|Name=TCONS_00041070|organism=Clytia hemisphaerica|type=transcript|length=947bp|location=Sequence derived from alignment at sc0002689:10385..11331- (Clytia hemisphaerica)
AACAAAATACACGGTTTTTTAAGCGAGTGCCGTCTATTATATTCTCCGAA
CTCTGAATTTTAAATCTATTTCGTGACTAACGGACAATTGCCATGTTTAC
TAACAGAAAACAACTTTTAGTGGAAAAATACTTCATTTTTGGTAAGTTTA
GCCTCAATTTGTTTGCAATAAGGTGTTAGAAACCAACCATTTTGAAAAAG
TGATCTTATGAAAATTTCATCTCAGGTAGGATGACTTTCGTGACTAACGG
ACAATTGCCATGTTTACTAACAGAAAACAACTTTTAGTGGAAAAATACTT
CATTTTTGGTAAGTTTAGCCTCAATTTGTTTGCAATAAGGTGTTAGAAAC
CAACCATTTTGAAAAAGTGATCTTATGAAAATTTCATCTCAGGTAGGATG
ACTTTCGTGACTAACGGACACTTCTTGATGAGCCTCTTGAGAGCTACCCA
CTCAACCTTTAGGGCTAAAATTTTGCACTTATTTTATGGTCATAGTACTT
CTGTTTTTAAGACAAAAATAAAAGAAACATGCAGCTTCCCTTGGCTTTCA
TTGGAACTTTTCTTCTTATCAGTGTGACTAACGGACAGTCGGGTAGGCAT
GCATAACAGCCAGAAAGAAAACAAATAGGAGTTAAGCAAAGCAGATTTTG
ATTATTGATATGTTTTCTATAATGGTTGTCAGTACTCTATCACAGATTTG
TGTACTGATACAATCATATTTGGATGAAAAAAGTTTCTGGAAAAGTTCTT
GGTTTTTTCAAGCAATTTTGTATTTTTTTTGTATTAAAGGCTTCACCCCA
GCACAGAAGCGTGAAAAATGGACTTTAAAGAAAGATTTTCTGGAGTCTCA
CACTTCAACATATGTATATTCAAGAGAAAATGAAAACTTATGTTATTTCT
GAATTTGAAATTTTGACCTAGATGTTAATTTTCTCATGGAATTCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00041070-exon-sc0002689-1575043694:10385..11331 | TCONS_00041070-exon-sc0002689-1575043694:10385..11331 | Clytia hemisphaerica | exon |
| TCONS_00041070-exon-sc0002689-1510915933:10385..11331 | TCONS_00041070-exon-sc0002689-1510915933:10385..11331 | Clytia hemisphaerica | exon |
| TCONS_00041070-exon-sc0002689-1491911889:10385..11331 | TCONS_00041070-exon-sc0002689-1491911889:10385..11331 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002689 | supercontig | sc0002689:10385..11331 - |
Blast
The following BLAST results are available for this feature:
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